Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.34□□□□□ -2.62
CPT1AP50416 MIR4426-201ENST00000640330 63 ntBASIC-1.34□□□□□ -2.62
CPT1AP50416 RNA5SP86-201ENST00000390869 98 ntBASIC-1.35□□□□□ -2.63
CPT1AP50416 RNU6-695P-201ENST00000391157 104 ntBASIC-1.36□□□□□ -2.63
CPT1AP50416 MIR548N-201ENST00000408742 75 ntBASIC-1.36□□□□□ -2.63
CPT1AP50416 RNU4-33P-201ENST00000364316 85 ntBASIC-1.37□□□□□ -2.63
CPT1AP50416 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.38□□□□□ -2.63
CPT1AP50416 SNORD18C-201ENST00000362704 69 ntBASIC-1.39□□□□□ -2.63
CPT1AP50416 RNU6-980P-201ENST00000516925 103 ntBASIC-1.39□□□□□ -2.63
CPT1AP50416 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.4□□□□□ -2.63
CPT1AP50416 RNU6-742P-201ENST00000365289 107 ntBASIC-1.4□□□□□ -2.63
CPT1AP50416 MIR581-201ENST00000384895 96 ntBASIC-1.4□□□□□ -2.63
CPT1AP50416 MIR487B-201ENST00000385021 84 ntBASIC-1.41□□□□□ -2.64
CPT1AP50416 RNU6-300P-201ENST00000459080 104 ntBASIC-1.41□□□□□ -2.64
CPT1AP50416 MIR4320-201ENST00000636981 65 ntBASIC-1.41□□□□□ -2.64
CPT1AP50416 MIR548H1-201ENST00000408610 102 ntBASIC-1.42□□□□□ -2.64
CPT1AP50416 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.42□□□□□ -2.64
CPT1AP50416 RNU6-176P-201ENST00000517196 105 ntBASIC-1.42□□□□□ -2.64
CPT1AP50416 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.43□□□□□ -2.64
CPT1AP50416 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.43□□□□□ -2.64
CPT1AP50416 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.43□□□□□ -2.64
CPT1AP50416 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.45□□□□□ -2.64
CPT1AP50416 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.45□□□□□ -2.64
CPT1AP50416 MIR3123-201ENST00000583417 75 ntBASIC-1.46□□□□□ -2.64
CPT1AP50416 RNU6-614P-201ENST00000384369 107 ntBASIC-1.47□□□□□ -2.64
CPT1AP50416 U6.59-201ENST00000615686 107 ntBASIC-1.47□□□□□ -2.64
CPT1AP50416 MIR1246-201ENST00000636535 73 ntBASIC-1.47□□□□□ -2.64
CPT1AP50416 SNORD18.1-201ENST00000363807 70 ntBASIC-1.49□□□□□ -2.65
CPT1AP50416 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.49□□□□□ -2.65
CPT1AP50416 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.49□□□□□ -2.65
CPT1AP50416 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.5□□□□□ -2.65
CPT1AP50416 RNA5SP180-201ENST00000516181 101 ntBASIC-1.5□□□□□ -2.65
CPT1AP50416 RNU6-936P-201ENST00000384005 107 ntBASIC-1.51□□□□□ -2.65
CPT1AP50416 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.53□□□□□ -2.65
CPT1AP50416 RNU6-841P-201ENST00000383872 107 ntBASIC-1.53□□□□□ -2.65
CPT1AP50416 MIR548AL-201ENST00000578416 97 ntBASIC-1.53□□□□□ -2.65
CPT1AP50416 MIR198-201ENST00000637333 62 ntBASIC-1.53□□□□□ -2.65
CPT1AP50416 MIR379-201ENST00000362218 67 ntBASIC-1.54□□□□□ -2.66
CPT1AP50416 AC108019.1-201ENST00000512540 175 ntBASIC-1.54□□□□□ -2.66
CPT1AP50416 RNU6-983P-201ENST00000516004 103 ntBASIC-1.54□□□□□ -2.66
CPT1AP50416 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.54□□□□□ -2.66
CPT1AP50416 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.55□□□□□ -2.66
CPT1AP50416 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.55□□□□□ -2.66
CPT1AP50416 MIR4756-201ENST00000577874 78 ntBASIC-1.55□□□□□ -2.66
CPT1AP50416 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.56□□□□□ -2.66
CPT1AP50416 RNU6-68P-201ENST00000516576 104 ntBASIC-1.56□□□□□ -2.66
CPT1AP50416 RNU6-753P-201ENST00000363926 107 ntBASIC-1.57□□□□□ -2.66
CPT1AP50416 RNU6-808P-201ENST00000391233 108 ntBASIC-1.58□□□□□ -2.66
CPT1AP50416 MIR601-201ENST00000385256 79 ntBASIC-1.59□□□□□ -2.66
CPT1AP50416 MTND4LP19-201ENST00000403051 166 ntBASIC-1.59□□□□□ -2.66
CPT1AP50416 MIR548AM-201ENST00000584298 74 ntBASIC-1.59□□□□□ -2.66
CPT1AP50416 RNU6-838P-201ENST00000363399 108 ntBASIC-1.6□□□□□ -2.67
CPT1AP50416 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.6□□□□□ -2.67
CPT1AP50416 MIR4317-201ENST00000637586 65 ntBASIC-1.6□□□□□ -2.67
CPT1AP50416 MIR1285-2-201ENST00000408311 88 ntBASIC-1.62□□□□□ -2.67
CPT1AP50416 snoU13.10-201ENST00000459301 103 ntBASIC-1.62□□□□□ -2.67
CPT1AP50416 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.63□□□□□ -2.67
CPT1AP50416 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.63□□□□□ -2.67
CPT1AP50416 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.63□□□□□ -2.67
CPT1AP50416 MIR548W-201ENST00000581970 74 ntBASIC-1.63□□□□□ -2.67
CPT1AP50416 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.64□□□□□ -2.67
CPT1AP50416 MIR4723-201ENST00000585070 81 ntBASIC-1.64□□□□□ -2.67
CPT1AP50416 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.64□□□□□ -2.67
CPT1AP50416 MIR664B-201ENST00000626756 61 ntBASIC-1.64□□□□□ -2.67
CPT1AP50416 RNU6-912P-201ENST00000363800 104 ntBASIC-1.65□□□□□ -2.67
CPT1AP50416 MIR548H4-201ENST00000408689 111 ntBASIC-1.66□□□□□ -2.68
CPT1AP50416 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.66□□□□□ -2.68
CPT1AP50416 RNU4-88P-201ENST00000411220 86 ntBASIC-1.67□□□□□ -2.68
CPT1AP50416 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.68□□□□□ -2.68
CPT1AP50416 RNU6-930P-201ENST00000390938 100 ntBASIC-1.7□□□□□ -2.68
CPT1AP50416 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.71□□□□□ -2.68
CPT1AP50416 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.71□□□□□ -2.68
CPT1AP50416 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.71□□□□□ -2.68
CPT1AP50416 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.71□□□□□ -2.68
CPT1AP50416 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.71□□□□□ -2.68
CPT1AP50416 MIR365A-201ENST00000362260 87 ntBASIC-1.73□□□□□ -2.69
CPT1AP50416 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.74□□□□□ -2.69
CPT1AP50416 MIR4441-201ENST00000582623 100 ntBASIC-1.74□□□□□ -2.69
CPT1AP50416 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.74□□□□□ -2.69
CPT1AP50416 RNU6-822P-201ENST00000362707 106 ntBASIC-1.75□□□□□ -2.69
CPT1AP50416 MIR548F3-201ENST00000408509 87 ntBASIC-1.75□□□□□ -2.69
CPT1AP50416 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.76□□□□□ -2.69
CPT1AP50416 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.76□□□□□ -2.69
CPT1AP50416 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.76□□□□□ -2.69
CPT1AP50416 RNA5SP405-201ENST00000363059 114 ntBASIC-1.77□□□□□ -2.69
CPT1AP50416 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.77□□□□□ -2.69
CPT1AP50416 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.77□□□□□ -2.69
CPT1AP50416 AC097484.2-201ENST00000509147 251 ntBASIC-1.78□□□□□ -2.69
CPT1AP50416 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.8□□□□□ -2.7
CPT1AP50416 RNU6-986P-201ENST00000363133 102 ntBASIC-1.81□□□□□ -2.7
CPT1AP50416 SNORD113-3-201ENST00000364830 72 ntBASIC-1.81□□□□□ -2.7
CPT1AP50416 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.81□□□□□ -2.7
CPT1AP50416 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.81□□□□□ -2.7
CPT1AP50416 RNU6-194P-201ENST00000363862 105 ntBASIC-1.82□□□□□ -2.7
CPT1AP50416 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.82□□□□□ -2.7
CPT1AP50416 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.82□□□□□ -2.7
CPT1AP50416 MIR3139-201ENST00000579145 76 ntBASIC-1.82□□□□□ -2.7
CPT1AP50416 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.82□□□□□ -2.7
CPT1AP50416 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.82□□□□□ -2.7
CPT1AP50416 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms