Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AC021146.6-201ENST00000514659 117 ntBASIC0.47□□□□□ -2.33
HOXD11P31277 MIR198-201ENST00000637333 62 ntBASIC0.47□□□□□ -2.33
HOXD11P31277 MIR4788-201ENST00000639104 80 ntBASIC0.46□□□□□ -2.34
HOXD11P31277 MIR548AX-201ENST00000580117 73 ntBASIC0.44□□□□□ -2.34
HOXD11P31277 MIR3666-201ENST00000607845 111 ntBASIC0.44□□□□□ -2.34
HOXD11P31277 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.44□□□□□ -2.34
HOXD11P31277 MIR101-1-201ENST00000362265 75 ntBASIC0.43□□□□□ -2.34
HOXD11P31277 SNORA18.1-201ENST00000363418 128 ntBASIC0.43□□□□□ -2.34
HOXD11P31277 Y_RNA.413-201ENST00000384007 102 ntBASIC0.43□□□□□ -2.34
HOXD11P31277 Y_RNA.754-201ENST00000476024 102 ntBASIC0.43□□□□□ -2.34
HOXD11P31277 Y_RNA.790-201ENST00000614282 102 ntBASIC0.43□□□□□ -2.34
HOXD11P31277 Y_RNA.782-201ENST00000614695 102 ntBASIC0.43□□□□□ -2.34
HOXD11P31277 Y_RNA.484-201ENST00000384389 103 ntBASIC0.42□□□□□ -2.34
HOXD11P31277 SNORD114-11-201ENST00000363738 75 ntBASIC0.4□□□□□ -2.35
HOXD11P31277 RNU6-164P-201ENST00000364604 103 ntBASIC0.4□□□□□ -2.35
HOXD11P31277 MIR6818-201ENST00000621576 65 ntBASIC0.39□□□□□ -2.35
HOXD11P31277 SNORD114-3-201ENST00000364969 75 ntBASIC0.38□□□□□ -2.35
HOXD11P31277 RNU6-1034P-201ENST00000365335 101 ntBASIC0.38□□□□□ -2.35
HOXD11P31277 MIR548H1-201ENST00000408610 102 ntBASIC0.37□□□□□ -2.35
HOXD11P31277 Y_RNA.514-201ENST00000384528 112 ntBASIC0.34□□□□□ -2.36
HOXD11P31277 Y_RNA.349-201ENST00000365406 102 ntBASIC0.33□□□□□ -2.36
HOXD11P31277 RNU6-1024P-201ENST00000384199 107 ntBASIC0.33□□□□□ -2.36
HOXD11P31277 MIR224-201ENST00000384889 81 ntBASIC0.33□□□□□ -2.36
HOXD11P31277 MIR4768-201ENST00000585270 74 ntBASIC0.33□□□□□ -2.36
HOXD11P31277 MIR147A-201ENST00000385079 72 ntBASIC0.32□□□□□ -2.36
HOXD11P31277 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.31□□□□□ -2.36
HOXD11P31277 MIR1295B-201ENST00000636144 60 ntBASIC0.31□□□□□ -2.36
HOXD11P31277 RNA5SP451-201ENST00000410588 110 ntBASIC0.29□□□□□ -2.36
HOXD11P31277 MIR371B-201ENST00000638082 66 ntBASIC0.28□□□□□ -2.36
HOXD11P31277 Y_RNA.468-201ENST00000384298 102 ntBASIC0.27□□□□□ -2.37
HOXD11P31277 RNU6-431P-201ENST00000383874 107 ntBASIC0.26□□□□□ -2.37
HOXD11P31277 RNU6-422P-201ENST00000384632 107 ntBASIC0.26□□□□□ -2.37
HOXD11P31277 Y_RNA.583-201ENST00000391033 113 ntBASIC0.26□□□□□ -2.37
HOXD11P31277 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
HOXD11P31277 MIR4290-201ENST00000583807 95 ntBASIC0.26□□□□□ -2.37
HOXD11P31277 RNA5SP300-201ENST00000391197 107 ntBASIC0.25□□□□□ -2.37
HOXD11P31277 SNORD64-201ENST00000386683 67 ntBASIC0.24□□□□□ -2.37
HOXD11P31277 SNORD4A-201ENST00000459174 72 ntBASIC0.23□□□□□ -2.37
HOXD11P31277 snoU83B.1-201ENST00000517136 88 ntBASIC0.21□□□□□ -2.38
HOXD11P31277 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
HOXD11P31277 SNORD114-28-201ENST00000363610 72 ntBASIC0.18□□□□□ -2.38
HOXD11P31277 MIR214-201ENST00000385214 110 ntBASIC0.17□□□□□ -2.38
HOXD11P31277 SNORD113-3-201ENST00000364830 72 ntBASIC0.15□□□□□ -2.39
HOXD11P31277 RNU6-1043P-201ENST00000410355 99 ntBASIC0.14□□□□□ -2.39
HOXD11P31277 Y_RNA.684-201ENST00000516510 99 ntBASIC0.13□□□□□ -2.39
HOXD11P31277 MIR4320-201ENST00000636981 65 ntBASIC0.13□□□□□ -2.39
HOXD11P31277 Y_RNA.228-201ENST00000364346 98 ntBASIC0.12□□□□□ -2.39
HOXD11P31277 RNU6-400P-201ENST00000391173 106 ntBASIC0.11□□□□□ -2.39
HOXD11P31277 RNU6-576P-201ENST00000390854 102 ntBASIC0.1□□□□□ -2.39
HOXD11P31277 RNU4-63P-201ENST00000411313 118 ntBASIC0.1□□□□□ -2.39
HOXD11P31277 SNORA3B-201ENST00000391305 131 ntBASIC0.09□□□□□ -2.4
HOXD11P31277 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC0.09□□□□□ -2.4
HOXD11P31277 snoU13.10-201ENST00000459301 103 ntBASIC0.08□□□□□ -2.4
HOXD11P31277 MIR4667-201ENST00000578933 66 ntBASIC0.08□□□□□ -2.4
HOXD11P31277 MIR6874-201ENST00000635894 71 ntBASIC0.07□□□□□ -2.4
HOXD11P31277 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
HOXD11P31277 MIR378F-201ENST00000578143 78 ntBASIC0.06□□□□□ -2.4
HOXD11P31277 MIR382-201ENST00000637119 76 ntBASIC0.06□□□□□ -2.4
HOXD11P31277 Y_RNA.449-201ENST00000384187 102 ntBASIC0.05□□□□□ -2.4
HOXD11P31277 MIR8064-201ENST00000612863 90 ntBASIC0.05□□□□□ -2.4
HOXD11P31277 ULK3-223ENST00000631115 126 ntTSL 5 BASIC0.05□□□□□ -2.4
HOXD11P31277 MIR587-201ENST00000384845 96 ntBASIC0.04□□□□□ -2.4
HOXD11P31277 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
HOXD11P31277 RNU6-627P-201ENST00000364032 102 ntBASIC0.03□□□□□ -2.4
HOXD11P31277 MIR365A-201ENST00000362260 87 ntBASIC0.02□□□□□ -2.41
HOXD11P31277 Y_RNA.55-201ENST00000362797 102 ntBASIC0.02□□□□□ -2.41
HOXD11P31277 AC091912.2-201ENST00000624798 167 ntBASIC0.02□□□□□ -2.41
HOXD11P31277 RNU6-983P-201ENST00000516004 103 ntBASIC0.01□□□□□ -2.41
HOXD11P31277 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.01□□□□□ -2.41
HOXD11P31277 MIR548W-201ENST00000581970 74 ntBASIC-0.01□□□□□ -2.41
HOXD11P31277 MIR3123-201ENST00000583417 75 ntBASIC-0.01□□□□□ -2.41
HOXD11P31277 RNU6-854P-201ENST00000364036 107 ntBASIC-0.02□□□□□ -2.41
HOXD11P31277 RNY4P7-201ENST00000364600 96 ntBASIC-0.02□□□□□ -2.41
HOXD11P31277 RNU7-134P-201ENST00000458997 64 ntBASIC-0.02□□□□□ -2.41
HOXD11P31277 RNY4P27-201ENST00000363341 96 ntBASIC-0.04□□□□□ -2.42
HOXD11P31277 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.06□□□□□ -2.42
HOXD11P31277 SNORD114-25-201ENST00000363742 72 ntBASIC-0.06□□□□□ -2.42
HOXD11P31277 MT-TQ-201ENST00000387372 72 ntBASIC-0.06□□□□□ -2.42
HOXD11P31277 SNORD114-14-201ENST00000362723 75 ntBASIC-0.09□□□□□ -2.42
HOXD11P31277 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.09□□□□□ -2.42
HOXD11P31277 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.09□□□□□ -2.42
HOXD11P31277 MIR4436A-201ENST00000585278 85 ntBASIC-0.09□□□□□ -2.42
HOXD11P31277 MIR196A2-201ENST00000385189 110 ntBASIC-0.11□□□□□ -2.43
HOXD11P31277 MIR4441-201ENST00000582623 100 ntBASIC-0.12□□□□□ -2.43
HOXD11P31277 MIR3681-201ENST00000580089 72 ntBASIC-0.14□□□□□ -2.43
HOXD11P31277 RNA5SP275-201ENST00000363936 118 ntBASIC-0.15□□□□□ -2.43
HOXD11P31277 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.15□□□□□ -2.43
HOXD11P31277 RNU6-320P-201ENST00000516511 106 ntBASIC-0.15□□□□□ -2.43
HOXD11P31277 SNORD14C-201ENST00000365382 88 ntBASIC-0.17□□□□□ -2.44
HOXD11P31277 RNU6-10P-201ENST00000384036 107 ntBASIC-0.17□□□□□ -2.44
HOXD11P31277 SNORD126-201ENST00000459475 77 ntBASIC-0.17□□□□□ -2.44
HOXD11P31277 SNORA32.3-201ENST00000384772 121 ntBASIC-0.18□□□□□ -2.44
HOXD11P31277 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.19□□□□□ -2.44
HOXD11P31277 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.19□□□□□ -2.44
HOXD11P31277 MIR1285-2-201ENST00000408311 88 ntBASIC-0.19□□□□□ -2.44
HOXD11P31277 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.21□□□□□ -2.44
HOXD11P31277 AC097484.2-201ENST00000509147 251 ntBASIC-0.22□□□□□ -2.44
HOXD11P31277 MIR548AZ-201ENST00000616567 95 ntBASIC-0.22□□□□□ -2.44
HOXD11P31277 SCARNA17-201ENST00000516183 144 ntBASIC-0.23□□□□□ -2.45
HOXD11P31277 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 209.5 ms