Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MIR147A-201ENST00000385079 72 ntBASIC-0.36□□□□□ -2.47
RFX1P22670 MIR1285-2-201ENST00000408311 88 ntBASIC-0.36□□□□□ -2.47
RFX1P22670 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.36□□□□□ -2.47
RFX1P22670 MIR382-201ENST00000637119 76 ntBASIC-0.36□□□□□ -2.47
RFX1P22670 MIR365A-201ENST00000362260 87 ntBASIC-0.37□□□□□ -2.47
RFX1P22670 RNU6-822P-201ENST00000362707 106 ntBASIC-0.37□□□□□ -2.47
RFX1P22670 snoU83B.1-201ENST00000517136 88 ntBASIC-0.37□□□□□ -2.47
RFX1P22670 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.38□□□□□ -2.47
RFX1P22670 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.38□□□□□ -2.47
RFX1P22670 RNU6-300P-201ENST00000459080 104 ntBASIC-0.38□□□□□ -2.47
RFX1P22670 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.38□□□□□ -2.47
RFX1P22670 MIR23C-201ENST00000579846 100 ntBASIC-0.38□□□□□ -2.47
RFX1P22670 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.38□□□□□ -2.47
RFX1P22670 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.38□□□□□ -2.47
RFX1P22670 MIR6874-201ENST00000635894 71 ntBASIC-0.38□□□□□ -2.47
RFX1P22670 MIR4317-201ENST00000637586 65 ntBASIC-0.38□□□□□ -2.47
RFX1P22670 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.39□□□□□ -2.47
RFX1P22670 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.4□□□□□ -2.47
RFX1P22670 MIR3115-201ENST00000577915 68 ntBASIC-0.4□□□□□ -2.47
RFX1P22670 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.41□□□□□ -2.48
RFX1P22670 SNORD60-201ENST00000383903 83 ntBASIC-0.41□□□□□ -2.48
RFX1P22670 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.41□□□□□ -2.48
RFX1P22670 MIR3165-201ENST00000579874 75 ntBASIC-0.41□□□□□ -2.48
RFX1P22670 AC013734.1-201ENST00000619329 111 ntBASIC-0.41□□□□□ -2.48
RFX1P22670 MIR198-201ENST00000637333 62 ntBASIC-0.41□□□□□ -2.48
RFX1P22670 SCARNA17-201ENST00000516183 144 ntBASIC-0.42□□□□□ -2.48
RFX1P22670 MIR4441-201ENST00000582623 100 ntBASIC-0.43□□□□□ -2.48
RFX1P22670 AC091912.2-201ENST00000624798 167 ntBASIC-0.43□□□□□ -2.48
RFX1P22670 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.43□□□□□ -2.48
RFX1P22670 RNU6-176P-201ENST00000517196 105 ntBASIC-0.44□□□□□ -2.48
RFX1P22670 AC120024.2-201ENST00000576526 175 ntBASIC-0.44□□□□□ -2.48
RFX1P22670 RNU6-563P-201ENST00000364872 108 ntBASIC-0.45□□□□□ -2.48
RFX1P22670 RNU6-59P-201ENST00000384787 107 ntBASIC-0.45□□□□□ -2.48
RFX1P22670 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.45□□□□□ -2.48
RFX1P22670 MIR548N-201ENST00000408742 75 ntBASIC-0.45□□□□□ -2.48
RFX1P22670 MIR6818-201ENST00000621576 65 ntBASIC-0.45□□□□□ -2.48
RFX1P22670 RNU6-226P-201ENST00000363778 107 ntBASIC-0.46□□□□□ -2.48
RFX1P22670 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.46□□□□□ -2.48
RFX1P22670 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.46□□□□□ -2.48
RFX1P22670 MIR4520-1-201ENST00000582609 70 ntBASIC-0.46□□□□□ -2.48
RFX1P22670 U6.97-201ENST00000636904 101 ntBASIC-0.47□□□□□ -2.48
RFX1P22670 RNY4P27-201ENST00000363341 96 ntBASIC-0.48□□□□□ -2.49
RFX1P22670 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.48□□□□□ -2.49
RFX1P22670 RNU6-576P-201ENST00000390854 102 ntBASIC-0.48□□□□□ -2.49
RFX1P22670 MIR1246-201ENST00000636535 73 ntBASIC-0.48□□□□□ -2.49
RFX1P22670 RNA5SP180-201ENST00000516181 101 ntBASIC-0.49□□□□□ -2.49
RFX1P22670 MIR581-201ENST00000384895 96 ntBASIC-0.5□□□□□ -2.49
RFX1P22670 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.51□□□□□ -2.49
RFX1P22670 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.51□□□□□ -2.49
RFX1P22670 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.52□□□□□ -2.49
RFX1P22670 RNU6-164P-201ENST00000364604 103 ntBASIC-0.52□□□□□ -2.49
RFX1P22670 MIR487B-201ENST00000385021 84 ntBASIC-0.52□□□□□ -2.49
RFX1P22670 AC018880.2-201ENST00000414265 201 ntBASIC-0.52□□□□□ -2.49
RFX1P22670 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.53□□□□□ -2.49
RFX1P22670 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.54□□□□□ -2.5
RFX1P22670 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.54□□□□□ -2.5
RFX1P22670 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.54□□□□□ -2.5
RFX1P22670 HLA-S-202ENST00000425174 53 ntBASIC-0.55□□□□□ -2.5
RFX1P22670 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.56□□□□□ -2.5
RFX1P22670 RNU6-706P-201ENST00000517229 104 ntBASIC-0.57□□□□□ -2.5
RFX1P22670 MIR5591-201ENST00000578248 65 ntBASIC-0.57□□□□□ -2.5
RFX1P22670 MIR4306-201ENST00000583390 91 ntBASIC-0.57□□□□□ -2.5
RFX1P22670 MIR6502-201ENST00000617296 76 ntBASIC-0.58□□□□□ -2.5
RFX1P22670 U6.103-201ENST00000637085 61 ntBASIC-0.58□□□□□ -2.5
RFX1P22670 RNU6-79P-201ENST00000362511 107 ntBASIC-0.59□□□□□ -2.5
RFX1P22670 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.59□□□□□ -2.5
RFX1P22670 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.59□□□□□ -2.5
RFX1P22670 SNORD18C-201ENST00000362704 69 ntBASIC-0.6□□□□□ -2.51
RFX1P22670 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.6□□□□□ -2.51
RFX1P22670 MIR496-201ENST00000385226 102 ntBASIC-0.6□□□□□ -2.51
RFX1P22670 RNU6-724P-201ENST00000390958 105 ntBASIC-0.6□□□□□ -2.51
RFX1P22670 MIR548H1-201ENST00000408610 102 ntBASIC-0.6□□□□□ -2.51
RFX1P22670 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.6□□□□□ -2.51
RFX1P22670 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.6□□□□□ -2.51
RFX1P22670 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.61□□□□□ -2.51
RFX1P22670 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.61□□□□□ -2.51
RFX1P22670 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.61□□□□□ -2.51
RFX1P22670 RNU6-68P-201ENST00000516576 104 ntBASIC-0.61□□□□□ -2.51
RFX1P22670 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.62□□□□□ -2.51
RFX1P22670 RNU6-119P-201ENST00000364882 107 ntBASIC-0.63□□□□□ -2.51
RFX1P22670 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.63□□□□□ -2.51
RFX1P22670 RNA5SP86-201ENST00000390869 98 ntBASIC-0.63□□□□□ -2.51
RFX1P22670 RNU6-695P-201ENST00000391157 104 ntBASIC-0.63□□□□□ -2.51
RFX1P22670 MIR3123-201ENST00000583417 75 ntBASIC-0.63□□□□□ -2.51
RFX1P22670 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.64□□□□□ -2.51
RFX1P22670 RNU6-400P-201ENST00000391173 106 ntBASIC-0.64□□□□□ -2.51
RFX1P22670 snoU13.10-201ENST00000459301 103 ntBASIC-0.64□□□□□ -2.51
RFX1P22670 RNA5SP93-201ENST00000362525 114 ntBASIC-0.65□□□□□ -2.51
RFX1P22670 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.65□□□□□ -2.51
RFX1P22670 RNU6-118P-201ENST00000516552 102 ntBASIC-0.65□□□□□ -2.51
RFX1P22670 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.65□□□□□ -2.51
RFX1P22670 RNY4P7-201ENST00000364600 96 ntBASIC-0.66□□□□□ -2.52
RFX1P22670 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.66□□□□□ -2.52
RFX1P22670 MIR4756-201ENST00000577874 78 ntBASIC-0.66□□□□□ -2.52
RFX1P22670 MIR379-201ENST00000362218 67 ntBASIC-0.67□□□□□ -2.52
RFX1P22670 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.67□□□□□ -2.52
RFX1P22670 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.67□□□□□ -2.52
RFX1P22670 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.67□□□□□ -2.52
RFX1P22670 MIR548W-201ENST00000581970 74 ntBASIC-0.67□□□□□ -2.52
RFX1P22670 RNU6-912P-201ENST00000363800 104 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 269.8 ms