Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC091912.2-201ENST00000624798 167 ntBASIC-0.63□□□□□ -2.51
COL5A1P20908 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.63□□□□□ -2.51
COL5A1P20908 MIR379-201ENST00000362218 67 ntBASIC-0.64□□□□□ -2.51
COL5A1P20908 RNU6-829P-201ENST00000363700 112 ntBASIC-0.64□□□□□ -2.51
COL5A1P20908 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.64□□□□□ -2.51
COL5A1P20908 RNU4-33P-201ENST00000364316 85 ntBASIC-0.64□□□□□ -2.51
COL5A1P20908 RNU6-563P-201ENST00000364872 108 ntBASIC-0.64□□□□□ -2.51
COL5A1P20908 MIR548N-201ENST00000408742 75 ntBASIC-0.64□□□□□ -2.51
COL5A1P20908 MIR5591-201ENST00000578248 65 ntBASIC-0.64□□□□□ -2.51
COL5A1P20908 AC013734.1-201ENST00000619329 111 ntBASIC-0.64□□□□□ -2.51
COL5A1P20908 MIR633-201ENST00000384821 98 ntBASIC-0.64□□□□□ -2.51
COL5A1P20908 RNU6-788P-201ENST00000390967 104 ntBASIC-0.64□□□□□ -2.51
COL5A1P20908 MIR4520-1-201ENST00000582609 70 ntBASIC-0.64□□□□□ -2.51
COL5A1P20908 SNORD18C-201ENST00000362704 69 ntBASIC-0.65□□□□□ -2.51
COL5A1P20908 RNU6-446P-201ENST00000362827 106 ntBASIC-0.65□□□□□ -2.51
COL5A1P20908 RNU6-400P-201ENST00000391173 106 ntBASIC-0.65□□□□□ -2.51
COL5A1P20908 AL451105.1-201ENST00000450005 189 ntBASIC-0.65□□□□□ -2.51
COL5A1P20908 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.66□□□□□ -2.51
COL5A1P20908 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.66□□□□□ -2.51
COL5A1P20908 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.66□□□□□ -2.51
COL5A1P20908 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.66□□□□□ -2.52
COL5A1P20908 RNA5SP180-201ENST00000516181 101 ntBASIC-0.66□□□□□ -2.52
COL5A1P20908 U6.97-201ENST00000636904 101 ntBASIC-0.66□□□□□ -2.52
COL5A1P20908 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.67□□□□□ -2.52
COL5A1P20908 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
COL5A1P20908 RNU6-530P-201ENST00000391180 107 ntBASIC-0.67□□□□□ -2.52
COL5A1P20908 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.67□□□□□ -2.52
COL5A1P20908 MIR202-201ENST00000362219 110 ntBASIC-0.68□□□□□ -2.52
COL5A1P20908 SNORD113-4-201ENST00000364802 75 ntBASIC-0.68□□□□□ -2.52
COL5A1P20908 RNY4P7-201ENST00000364600 96 ntBASIC-0.68□□□□□ -2.52
COL5A1P20908 SNORA17.4-201ENST00000391287 132 ntBASIC-0.68□□□□□ -2.52
COL5A1P20908 RNU6-176P-201ENST00000517196 105 ntBASIC-0.68□□□□□ -2.52
COL5A1P20908 RNA5SP93-201ENST00000362525 114 ntBASIC-0.69□□□□□ -2.52
COL5A1P20908 RNU6-614P-201ENST00000384369 107 ntBASIC-0.69□□□□□ -2.52
COL5A1P20908 MIR548AL-201ENST00000578416 97 ntBASIC-0.69□□□□□ -2.52
COL5A1P20908 U6.59-201ENST00000615686 107 ntBASIC-0.69□□□□□ -2.52
COL5A1P20908 MIR6502-201ENST00000617296 76 ntBASIC-0.69□□□□□ -2.52
COL5A1P20908 MIR4426-201ENST00000640330 63 ntBASIC-0.69□□□□□ -2.52
COL5A1P20908 RNU6-226P-201ENST00000363778 107 ntBASIC-0.7□□□□□ -2.52
COL5A1P20908 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.7□□□□□ -2.52
COL5A1P20908 MIR6874-201ENST00000635894 71 ntBASIC-0.7□□□□□ -2.52
COL5A1P20908 RNU6-980P-201ENST00000516925 103 ntBASIC-0.71□□□□□ -2.52
COL5A1P20908 RNU6-742P-201ENST00000365289 107 ntBASIC-0.72□□□□□ -2.52
COL5A1P20908 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.72□□□□□ -2.52
COL5A1P20908 MIR581-201ENST00000384895 96 ntBASIC-0.72□□□□□ -2.52
COL5A1P20908 RNU6-300P-201ENST00000459080 104 ntBASIC-0.72□□□□□ -2.52
COL5A1P20908 Y_RNA.722-201ENST00000517279 114 ntBASIC-0.72□□□□□ -2.52
COL5A1P20908 MIR4317-201ENST00000637586 65 ntBASIC-0.72□□□□□ -2.52
COL5A1P20908 RNU6-841P-201ENST00000383872 107 ntBASIC-0.73□□□□□ -2.53
COL5A1P20908 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.73□□□□□ -2.53
COL5A1P20908 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.74□□□□□ -2.53
COL5A1P20908 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.75□□□□□ -2.53
COL5A1P20908 MIR548H4-201ENST00000408689 111 ntBASIC-0.75□□□□□ -2.53
COL5A1P20908 MIR3123-201ENST00000583417 75 ntBASIC-0.75□□□□□ -2.53
COL5A1P20908 RNU6-808P-201ENST00000391233 108 ntBASIC-0.76□□□□□ -2.53
COL5A1P20908 MTND4LP19-201ENST00000403051 166 ntBASIC-0.77□□□□□ -2.53
COL5A1P20908 snoU13.10-201ENST00000459301 103 ntBASIC-0.77□□□□□ -2.53
COL5A1P20908 MIR548W-201ENST00000581970 74 ntBASIC-0.77□□□□□ -2.53
COL5A1P20908 MIR496-201ENST00000385226 102 ntBASIC-0.78□□□□□ -2.53
COL5A1P20908 MIR548H1-201ENST00000408610 102 ntBASIC-0.78□□□□□ -2.53
COL5A1P20908 RNU6-983P-201ENST00000516004 103 ntBASIC-0.78□□□□□ -2.53
COL5A1P20908 RNU6-68P-201ENST00000516576 104 ntBASIC-0.78□□□□□ -2.53
COL5A1P20908 MIR548AM-201ENST00000584298 74 ntBASIC-0.78□□□□□ -2.53
COL5A1P20908 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.78□□□□□ -2.53
COL5A1P20908 RNU6-912P-201ENST00000363800 104 ntBASIC-0.78□□□□□ -2.53
COL5A1P20908 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.78□□□□□ -2.53
COL5A1P20908 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.78□□□□□ -2.53
COL5A1P20908 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.78□□□□□ -2.53
COL5A1P20908 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.79□□□□□ -2.54
COL5A1P20908 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.8□□□□□ -2.54
COL5A1P20908 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.8□□□□□ -2.54
COL5A1P20908 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.8□□□□□ -2.54
COL5A1P20908 AC079150.2-201ENST00000443733 78 ntBASIC-0.8□□□□□ -2.54
COL5A1P20908 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.8□□□□□ -2.54
COL5A1P20908 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.82□□□□□ -2.54
COL5A1P20908 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.82□□□□□ -2.54
COL5A1P20908 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.82□□□□□ -2.54
COL5A1P20908 RNU6-753P-201ENST00000363926 107 ntBASIC-0.84□□□□□ -2.54
COL5A1P20908 RNU6-936P-201ENST00000384005 107 ntBASIC-0.84□□□□□ -2.54
COL5A1P20908 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.84□□□□□ -2.54
COL5A1P20908 MIR545-201ENST00000385085 106 ntBASIC-0.85□□□□□ -2.54
COL5A1P20908 RNY4-201ENST00000516507 96 ntBASIC-0.85□□□□□ -2.54
COL5A1P20908 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.85□□□□□ -2.55
COL5A1P20908 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.85□□□□□ -2.55
COL5A1P20908 MIR487B-201ENST00000385021 84 ntBASIC-0.86□□□□□ -2.55
COL5A1P20908 RNA5SP86-201ENST00000390869 98 ntBASIC-0.86□□□□□ -2.55
COL5A1P20908 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.87□□□□□ -2.55
COL5A1P20908 RNU6-987P-201ENST00000384759 104 ntBASIC-0.87□□□□□ -2.55
COL5A1P20908 RNU6-838P-201ENST00000363399 108 ntBASIC-0.87□□□□□ -2.55
COL5A1P20908 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.87□□□□□ -2.55
COL5A1P20908 RNU4-88P-201ENST00000411220 86 ntBASIC-0.87□□□□□ -2.55
COL5A1P20908 RNU6-822P-201ENST00000362707 106 ntBASIC-0.88□□□□□ -2.55
COL5A1P20908 RNU6-345P-201ENST00000517001 107 ntBASIC-0.88□□□□□ -2.55
COL5A1P20908 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.88□□□□□ -2.55
COL5A1P20908 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.89□□□□□ -2.55
COL5A1P20908 SNORD113-3-201ENST00000364830 72 ntBASIC-0.89□□□□□ -2.55
COL5A1P20908 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.89□□□□□ -2.55
COL5A1P20908 MIR664B-201ENST00000626756 61 ntBASIC-0.89□□□□□ -2.55
COL5A1P20908 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.89□□□□□ -2.55
COL5A1P20908 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms