Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MIR3938-201ENST00000582157 103 ntBASIC-1.05□□□□□ -2.58
CCDC85CA6NKD9 RNU7-119P-201ENST00000459279 63 ntBASIC-1.06□□□□□ -2.58
CCDC85CA6NKD9 MIR4756-201ENST00000577874 78 ntBASIC-1.06□□□□□ -2.58
CCDC85CA6NKD9 AC125388.1-201ENST00000459631 156 ntBASIC-1.07□□□□□ -2.58
CCDC85CA6NKD9 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.07□□□□□ -2.58
CCDC85CA6NKD9 RNU6-810P-201ENST00000364001 107 ntBASIC-1.08□□□□□ -2.58
CCDC85CA6NKD9 RNU6-669P-201ENST00000365575 107 ntBASIC-1.08□□□□□ -2.58
CCDC85CA6NKD9 RNU6-576P-201ENST00000390854 102 ntBASIC-1.08□□□□□ -2.58
CCDC85CA6NKD9 MIR7978-201ENST00000636158 59 ntBASIC-1.08□□□□□ -2.58
CCDC85CA6NKD9 RNU6-164P-201ENST00000364604 103 ntBASIC-1.09□□□□□ -2.58
CCDC85CA6NKD9 MIR6502-201ENST00000617296 76 ntBASIC-1.09□□□□□ -2.58
CCDC85CA6NKD9 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.09□□□□□ -2.58
CCDC85CA6NKD9 RNU6-974P-201ENST00000384099 108 ntBASIC-1.11□□□□□ -2.59
CCDC85CA6NKD9 AC108019.1-201ENST00000512540 175 ntBASIC-1.11□□□□□ -2.59
CCDC85CA6NKD9 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.11□□□□□ -2.59
CCDC85CA6NKD9 MIR664B-201ENST00000626756 61 ntBASIC-1.11□□□□□ -2.59
CCDC85CA6NKD9 RNU6-563P-201ENST00000364872 108 ntBASIC-1.12□□□□□ -2.59
CCDC85CA6NKD9 MIR487B-201ENST00000385021 84 ntBASIC-1.13□□□□□ -2.59
CCDC85CA6NKD9 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.13□□□□□ -2.59
CCDC85CA6NKD9 RNU7-160P-201ENST00000516660 62 ntBASIC-1.13□□□□□ -2.59
CCDC85CA6NKD9 SNORD63.2-201ENST00000516303 64 ntBASIC-1.14□□□□□ -2.59
CCDC85CA6NKD9 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.14□□□□□ -2.59
CCDC85CA6NKD9 RNA5SP405-201ENST00000363059 114 ntBASIC-1.15□□□□□ -2.59
CCDC85CA6NKD9 RNU6-520P-201ENST00000384717 104 ntBASIC-1.15□□□□□ -2.59
CCDC85CA6NKD9 SNORA40B-201ENST00000385573 128 ntBASIC-1.15□□□□□ -2.59
CCDC85CA6NKD9 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.17□□□□□ -2.6
CCDC85CA6NKD9 MIR125B1-201ENST00000385236 88 ntBASIC-1.17□□□□□ -2.6
CCDC85CA6NKD9 AC018880.2-201ENST00000414265 201 ntBASIC-1.17□□□□□ -2.6
CCDC85CA6NKD9 AC139453.2-201ENST00000487255 133 ntBASIC-1.17□□□□□ -2.6
CCDC85CA6NKD9 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.17□□□□□ -2.6
CCDC85CA6NKD9 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.18□□□□□ -2.6
CCDC85CA6NKD9 MIR548H1-201ENST00000408610 102 ntBASIC-1.18□□□□□ -2.6
CCDC85CA6NKD9 SNORA40.16-201ENST00000517238 121 ntBASIC-1.19□□□□□ -2.6
CCDC85CA6NKD9 AC120024.2-201ENST00000576526 175 ntBASIC-1.19□□□□□ -2.6
CCDC85CA6NKD9 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.2□□□□□ -2.6
CCDC85CA6NKD9 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.21□□□□□ -2.6
CCDC85CA6NKD9 RNU6-828P-201ENST00000364876 107 ntBASIC-1.21□□□□□ -2.6
CCDC85CA6NKD9 RNY3P8-201ENST00000411366 126 ntBASIC-1.21□□□□□ -2.6
CCDC85CA6NKD9 RNU6-79P-201ENST00000362511 107 ntBASIC-1.22□□□□□ -2.6
CCDC85CA6NKD9 AC013734.1-201ENST00000619329 111 ntBASIC-1.22□□□□□ -2.6
CCDC85CA6NKD9 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.23□□□□□ -2.61
CCDC85CA6NKD9 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.24□□□□□ -2.61
CCDC85CA6NKD9 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.25□□□□□ -2.61
CCDC85CA6NKD9 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.25□□□□□ -2.61
CCDC85CA6NKD9 SNORA27.2-201ENST00000363365 126 ntBASIC-1.26□□□□□ -2.61
CCDC85CA6NKD9 U6.97-201ENST00000636904 101 ntBASIC-1.26□□□□□ -2.61
CCDC85CA6NKD9 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.27□□□□□ -2.61
CCDC85CA6NKD9 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.28□□□□□ -2.61
CCDC85CA6NKD9 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.28□□□□□ -2.61
CCDC85CA6NKD9 MIR23C-201ENST00000579846 100 ntBASIC-1.28□□□□□ -2.61
CCDC85CA6NKD9 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.29□□□□□ -2.62
CCDC85CA6NKD9 RNU6-230P-201ENST00000362457 104 ntBASIC-1.3□□□□□ -2.62
CCDC85CA6NKD9 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.3□□□□□ -2.62
CCDC85CA6NKD9 MIR633-201ENST00000384821 98 ntBASIC-1.3□□□□□ -2.62
CCDC85CA6NKD9 RNU6-400P-201ENST00000391173 106 ntBASIC-1.3□□□□□ -2.62
CCDC85CA6NKD9 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.31□□□□□ -2.62
CCDC85CA6NKD9 RNU6-446P-201ENST00000362827 106 ntBASIC-1.33□□□□□ -2.62
CCDC85CA6NKD9 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
CCDC85CA6NKD9 MIR202-201ENST00000362219 110 ntBASIC-1.34□□□□□ -2.62
CCDC85CA6NKD9 RNU6-194P-201ENST00000363862 105 ntBASIC-1.34□□□□□ -2.62
CCDC85CA6NKD9 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.34□□□□□ -2.62
CCDC85CA6NKD9 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.36□□□□□ -2.63
CCDC85CA6NKD9 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.36□□□□□ -2.63
CCDC85CA6NKD9 MIR581-201ENST00000384895 96 ntBASIC-1.36□□□□□ -2.63
CCDC85CA6NKD9 RNU6-788P-201ENST00000390967 104 ntBASIC-1.36□□□□□ -2.63
CCDC85CA6NKD9 RNU6-695P-201ENST00000391157 104 ntBASIC-1.36□□□□□ -2.63
CCDC85CA6NKD9 SNORD45.2-201ENST00000363552 72 ntBASIC-1.37□□□□□ -2.63
CCDC85CA6NKD9 RNU6-829P-201ENST00000363700 112 ntBASIC-1.38□□□□□ -2.63
CCDC85CA6NKD9 MIR3123-201ENST00000583417 75 ntBASIC-1.38□□□□□ -2.63
CCDC85CA6NKD9 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.38□□□□□ -2.63
CCDC85CA6NKD9 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.39□□□□□ -2.63
CCDC85CA6NKD9 RNU6-530P-201ENST00000391180 107 ntBASIC-1.39□□□□□ -2.63
CCDC85CA6NKD9 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.4□□□□□ -2.63
CCDC85CA6NKD9 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.4□□□□□ -2.63
CCDC85CA6NKD9 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.4□□□□□ -2.63
CCDC85CA6NKD9 AL451105.1-201ENST00000450005 189 ntBASIC-1.41□□□□□ -2.64
CCDC85CA6NKD9 RNU6-419P-201ENST00000517030 63 ntBASIC-1.41□□□□□ -2.64
CCDC85CA6NKD9 RNA5SP106-201ENST00000517274 100 ntBASIC-1.41□□□□□ -2.64
CCDC85CA6NKD9 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.41□□□□□ -2.64
CCDC85CA6NKD9 RNU6-499P-201ENST00000365615 107 ntBASIC-1.44□□□□□ -2.64
CCDC85CA6NKD9 AC079150.2-201ENST00000443733 78 ntBASIC-1.45□□□□□ -2.64
CCDC85CA6NKD9 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.46□□□□□ -2.64
CCDC85CA6NKD9 MIR548X-201ENST00000580069 75 ntBASIC-1.46□□□□□ -2.64
CCDC85CA6NKD9 SNORD113-4-201ENST00000364802 75 ntBASIC-1.47□□□□□ -2.64
CCDC85CA6NKD9 RNU6-987P-201ENST00000384759 104 ntBASIC-1.47□□□□□ -2.64
CCDC85CA6NKD9 SNORA17.4-201ENST00000391287 132 ntBASIC-1.48□□□□□ -2.65
CCDC85CA6NKD9 MIR548N-201ENST00000408742 75 ntBASIC-1.49□□□□□ -2.65
CCDC85CA6NKD9 snoU13.10-201ENST00000459301 103 ntBASIC-1.49□□□□□ -2.65
CCDC85CA6NKD9 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.49□□□□□ -2.65
CCDC85CA6NKD9 MIR4426-201ENST00000640330 63 ntBASIC-1.49□□□□□ -2.65
CCDC85CA6NKD9 RNU6-742P-201ENST00000365289 107 ntBASIC-1.5□□□□□ -2.65
CCDC85CA6NKD9 MIR548W-201ENST00000581970 74 ntBASIC-1.5□□□□□ -2.65
CCDC85CA6NKD9 MIR548AM-201ENST00000584298 74 ntBASIC-1.5□□□□□ -2.65
CCDC85CA6NKD9 RNU6-361P-201ENST00000364454 107 ntBASIC-1.51□□□□□ -2.65
CCDC85CA6NKD9 RNU6-841P-201ENST00000383872 107 ntBASIC-1.51□□□□□ -2.65
CCDC85CA6NKD9 SNORD60-201ENST00000383903 83 ntBASIC-1.51□□□□□ -2.65
CCDC85CA6NKD9 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.52□□□□□ -2.65
CCDC85CA6NKD9 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.52□□□□□ -2.65
CCDC85CA6NKD9 SNORD18C-201ENST00000362704 69 ntBASIC-1.53□□□□□ -2.65
CCDC85CA6NKD9 RNY4P10-201ENST00000365571 96 ntBASIC-1.54□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 245.8 ms