Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.42□□□□□ -2.64
ATG4BQ9Y4P1 U2.22-201ENST00000636441 106 ntBASIC-1.42□□□□□ -2.64
ATG4BQ9Y4P1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.42□□□□□ -2.64
ATG4BQ9Y4P1 MIR429-201ENST00000362106 83 ntBASIC-1.43□□□□□ -2.64
ATG4BQ9Y4P1 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.43□□□□□ -2.64
ATG4BQ9Y4P1 RNU6-698P-201ENST00000363523 107 ntBASIC-1.43□□□□□ -2.64
ATG4BQ9Y4P1 RNU6-668P-201ENST00000364180 107 ntBASIC-1.43□□□□□ -2.64
ATG4BQ9Y4P1 RNU6-34P-201ENST00000364874 107 ntBASIC-1.43□□□□□ -2.64
ATG4BQ9Y4P1 SNORD113-2-201ENST00000391082 72 ntBASIC-1.43□□□□□ -2.64
ATG4BQ9Y4P1 RNU6-118P-201ENST00000516552 102 ntBASIC-1.43□□□□□ -2.64
ATG4BQ9Y4P1 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.43□□□□□ -2.64
ATG4BQ9Y4P1 MIR664A-201ENST00000626086 82 ntBASIC-1.43□□□□□ -2.64
ATG4BQ9Y4P1 RNU6-194P-201ENST00000363862 105 ntBASIC-1.44□□□□□ -2.64
ATG4BQ9Y4P1 RNU6-974P-201ENST00000384099 108 ntBASIC-1.44□□□□□ -2.64
ATG4BQ9Y4P1 SNORA41B-201ENST00000384785 128 ntBASIC-1.44□□□□□ -2.64
ATG4BQ9Y4P1 MIR630-201ENST00000384957 97 ntBASIC-1.44□□□□□ -2.64
ATG4BQ9Y4P1 RNY3P8-201ENST00000411366 126 ntBASIC-1.44□□□□□ -2.64
ATG4BQ9Y4P1 MIR3139-201ENST00000579145 76 ntBASIC-1.44□□□□□ -2.64
ATG4BQ9Y4P1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.44□□□□□ -2.64
ATG4BQ9Y4P1 SNORD1B-201ENST00000363091 84 ntBASIC-1.45□□□□□ -2.64
ATG4BQ9Y4P1 SNORD113.1-201ENST00000363280 73 ntBASIC-1.45□□□□□ -2.64
ATG4BQ9Y4P1 RNU6-979P-201ENST00000383896 107 ntBASIC-1.45□□□□□ -2.64
ATG4BQ9Y4P1 SNORD45A-201ENST00000384512 84 ntBASIC-1.45□□□□□ -2.64
ATG4BQ9Y4P1 MIR496-201ENST00000385226 102 ntBASIC-1.45□□□□□ -2.64
ATG4BQ9Y4P1 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.45□□□□□ -2.64
ATG4BQ9Y4P1 MIR548AA1-201ENST00000384971 97 ntBASIC-1.46□□□□□ -2.64
ATG4BQ9Y4P1 MIR579-201ENST00000385221 98 ntBASIC-1.46□□□□□ -2.64
ATG4BQ9Y4P1 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.46□□□□□ -2.64
ATG4BQ9Y4P1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.46□□□□□ -2.64
ATG4BQ9Y4P1 RNU6-247P-201ENST00000362636 107 ntBASIC-1.47□□□□□ -2.64
ATG4BQ9Y4P1 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.47□□□□□ -2.64
ATG4BQ9Y4P1 RNU6-669P-201ENST00000365575 107 ntBASIC-1.47□□□□□ -2.64
ATG4BQ9Y4P1 SNORD116-16-201ENST00000384533 92 ntBASIC-1.47□□□□□ -2.64
ATG4BQ9Y4P1 MIR494-201ENST00000349529 81 ntBASIC-1.48□□□□□ -2.65
ATG4BQ9Y4P1 MIR581-201ENST00000384895 96 ntBASIC-1.48□□□□□ -2.65
ATG4BQ9Y4P1 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.48□□□□□ -2.65
ATG4BQ9Y4P1 RNU7-151P-201ENST00000516930 53 ntBASIC-1.48□□□□□ -2.65
ATG4BQ9Y4P1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.48□□□□□ -2.65
ATG4BQ9Y4P1 RNU6-119P-201ENST00000364882 107 ntBASIC-1.49□□□□□ -2.65
ATG4BQ9Y4P1 SNORD63.2-201ENST00000516303 64 ntBASIC-1.49□□□□□ -2.65
ATG4BQ9Y4P1 MIR7978-201ENST00000636158 59 ntBASIC-1.49□□□□□ -2.65
ATG4BQ9Y4P1 RNA5SP215-201ENST00000363440 122 ntBASIC-1.5□□□□□ -2.65
ATG4BQ9Y4P1 RNU6-153P-201ENST00000364422 104 ntBASIC-1.5□□□□□ -2.65
ATG4BQ9Y4P1 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.5□□□□□ -2.65
ATG4BQ9Y4P1 RNU7-171P-201ENST00000459581 62 ntBASIC-1.5□□□□□ -2.65
ATG4BQ9Y4P1 SNORA27.2-201ENST00000363365 126 ntBASIC-1.51□□□□□ -2.65
ATG4BQ9Y4P1 RNU6-242P-201ENST00000384359 107 ntBASIC-1.51□□□□□ -2.65
ATG4BQ9Y4P1 MT-TM-201ENST00000387377 68 ntBASIC-1.51□□□□□ -2.65
ATG4BQ9Y4P1 RNU6-995P-201ENST00000391244 107 ntBASIC-1.52□□□□□ -2.65
ATG4BQ9Y4P1 MIR4712-201ENST00000583750 82 ntBASIC-1.52□□□□□ -2.65
ATG4BQ9Y4P1 MIR1245B-201ENST00000636115 69 ntBASIC-1.52□□□□□ -2.65
ATG4BQ9Y4P1 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.53□□□□□ -2.65
ATG4BQ9Y4P1 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
ATG4BQ9Y4P1 RNU6-523P-201ENST00000516304 54 ntBASIC-1.53□□□□□ -2.65
ATG4BQ9Y4P1 RNU6-70P-201ENST00000516438 60 ntBASIC-1.53□□□□□ -2.65
ATG4BQ9Y4P1 MIR4748-201ENST00000578076 82 ntBASIC-1.53□□□□□ -2.65
ATG4BQ9Y4P1 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.54□□□□□ -2.66
ATG4BQ9Y4P1 MIR125B1-201ENST00000385236 88 ntBASIC-1.54□□□□□ -2.66
ATG4BQ9Y4P1 MIR154-201ENST00000385243 84 ntBASIC-1.54□□□□□ -2.66
ATG4BQ9Y4P1 RNA5SP173-201ENST00000364857 136 ntBASIC-1.55□□□□□ -2.66
ATG4BQ9Y4P1 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.55□□□□□ -2.66
ATG4BQ9Y4P1 RNU6-172P-201ENST00000411000 93 ntBASIC-1.55□□□□□ -2.66
ATG4BQ9Y4P1 MIR466-201ENST00000580653 84 ntBASIC-1.55□□□□□ -2.66
ATG4BQ9Y4P1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.55□□□□□ -2.66
ATG4BQ9Y4P1 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.56□□□□□ -2.66
ATG4BQ9Y4P1 RNU6-294P-201ENST00000364999 102 ntBASIC-1.56□□□□□ -2.66
ATG4BQ9Y4P1 RNU6-895P-201ENST00000384125 103 ntBASIC-1.56□□□□□ -2.66
ATG4BQ9Y4P1 MIR450A2-201ENST00000385022 100 ntBASIC-1.56□□□□□ -2.66
ATG4BQ9Y4P1 AC097484.2-201ENST00000509147 251 ntBASIC-1.56□□□□□ -2.66
ATG4BQ9Y4P1 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.56□□□□□ -2.66
ATG4BQ9Y4P1 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.57□□□□□ -2.66
ATG4BQ9Y4P1 FTX_4.1-201ENST00000616291 147 ntBASIC-1.57□□□□□ -2.66
ATG4BQ9Y4P1 MIR202-201ENST00000362219 110 ntBASIC-1.58□□□□□ -2.66
ATG4BQ9Y4P1 SNORD18C-201ENST00000362704 69 ntBASIC-1.59□□□□□ -2.66
ATG4BQ9Y4P1 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.59□□□□□ -2.66
ATG4BQ9Y4P1 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.59□□□□□ -2.66
ATG4BQ9Y4P1 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.59□□□□□ -2.66
ATG4BQ9Y4P1 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.59□□□□□ -2.66
ATG4BQ9Y4P1 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.59□□□□□ -2.66
ATG4BQ9Y4P1 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.59□□□□□ -2.66
ATG4BQ9Y4P1 RNY4P7-201ENST00000364600 96 ntBASIC-1.6□□□□□ -2.67
ATG4BQ9Y4P1 SNORD113-3-201ENST00000364830 72 ntBASIC-1.6□□□□□ -2.67
ATG4BQ9Y4P1 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.6□□□□□ -2.67
ATG4BQ9Y4P1 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.6□□□□□ -2.67
ATG4BQ9Y4P1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.6□□□□□ -2.67
ATG4BQ9Y4P1 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.61□□□□□ -2.67
ATG4BQ9Y4P1 RNU6-520P-201ENST00000384717 104 ntBASIC-1.61□□□□□ -2.67
ATG4BQ9Y4P1 RNU6-141P-201ENST00000410499 105 ntBASIC-1.61□□□□□ -2.67
ATG4BQ9Y4P1 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.62□□□□□ -2.67
ATG4BQ9Y4P1 RNU6-649P-201ENST00000384463 107 ntBASIC-1.62□□□□□ -2.67
ATG4BQ9Y4P1 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.62□□□□□ -2.67
ATG4BQ9Y4P1 MIR548N-201ENST00000408742 75 ntBASIC-1.62□□□□□ -2.67
ATG4BQ9Y4P1 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.63□□□□□ -2.67
ATG4BQ9Y4P1 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.64□□□□□ -2.67
ATG4BQ9Y4P1 SNORD116-24-201ENST00000384549 92 ntBASIC-1.64□□□□□ -2.67
ATG4BQ9Y4P1 RNU6-68P-201ENST00000516576 104 ntBASIC-1.64□□□□□ -2.67
ATG4BQ9Y4P1 MIR4666B-201ENST00000578142 81 ntBASIC-1.64□□□□□ -2.67
ATG4BQ9Y4P1 MIR3134-201ENST00000579433 74 ntBASIC-1.64□□□□□ -2.67
ATG4BQ9Y4P1 MIR5582-201ENST00000579697 68 ntBASIC-1.64□□□□□ -2.67
ATG4BQ9Y4P1 RNU6-912P-201ENST00000363800 104 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms