Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 SNORD1B-201ENST00000363091 84 ntBASIC-0.57□□□□□ -2.5
VSX1Q9NZR4 RNU6-226P-201ENST00000363778 107 ntBASIC-0.57□□□□□ -2.5
VSX1Q9NZR4 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.57□□□□□ -2.5
VSX1Q9NZR4 RNU6-721P-201ENST00000410155 105 ntBASIC-0.57□□□□□ -2.5
VSX1Q9NZR4 SNORD114-25-201ENST00000363742 72 ntBASIC-0.58□□□□□ -2.5
VSX1Q9NZR4 RNU6-995P-201ENST00000391244 107 ntBASIC-0.58□□□□□ -2.5
VSX1Q9NZR4 AL353691.2-201ENST00000443795 59 ntBASIC-0.58□□□□□ -2.5
VSX1Q9NZR4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.58□□□□□ -2.5
VSX1Q9NZR4 RNA5SP331-201ENST00000364986 107 ntBASIC-0.59□□□□□ -2.5
VSX1Q9NZR4 MIR601-201ENST00000385256 79 ntBASIC-0.59□□□□□ -2.5
VSX1Q9NZR4 RNU6-231P-201ENST00000517122 103 ntBASIC-0.59□□□□□ -2.5
VSX1Q9NZR4 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.6□□□□□ -2.51
VSX1Q9NZR4 RNU6-172P-201ENST00000411000 93 ntBASIC-0.6□□□□□ -2.51
VSX1Q9NZR4 RNU7-160P-201ENST00000516660 62 ntBASIC-0.6□□□□□ -2.51
VSX1Q9NZR4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.6□□□□□ -2.51
VSX1Q9NZR4 uc_338.19-201ENST00000616808 99 ntBASIC-0.6□□□□□ -2.51
VSX1Q9NZR4 SNORD114-17-201ENST00000364699 75 ntBASIC-0.61□□□□□ -2.51
VSX1Q9NZR4 RNA5SP180-201ENST00000516181 101 ntBASIC-0.61□□□□□ -2.51
VSX1Q9NZR4 MIR1285-2-201ENST00000408311 88 ntBASIC-0.64□□□□□ -2.51
VSX1Q9NZR4 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.65□□□□□ -2.51
VSX1Q9NZR4 MIR3165-201ENST00000579874 75 ntBASIC-0.65□□□□□ -2.51
VSX1Q9NZR4 MIR4306-201ENST00000583390 91 ntBASIC-0.65□□□□□ -2.51
VSX1Q9NZR4 U2.18-201ENST00000622185 84 ntBASIC-0.65□□□□□ -2.51
VSX1Q9NZR4 MIR1246-201ENST00000636535 73 ntBASIC-0.65□□□□□ -2.51
VSX1Q9NZR4 MIR548Q-201ENST00000408404 100 ntBASIC-0.66□□□□□ -2.52
VSX1Q9NZR4 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.66□□□□□ -2.52
VSX1Q9NZR4 MIR365A-201ENST00000362260 87 ntBASIC-0.67□□□□□ -2.52
VSX1Q9NZR4 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.67□□□□□ -2.52
VSX1Q9NZR4 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.67□□□□□ -2.52
VSX1Q9NZR4 MIR4490-201ENST00000582647 84 ntBASIC-0.67□□□□□ -2.52
VSX1Q9NZR4 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.67□□□□□ -2.52
VSX1Q9NZR4 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.67□□□□□ -2.52
VSX1Q9NZR4 SNORD19-201ENST00000391191 68 ntBASIC-0.68□□□□□ -2.52
VSX1Q9NZR4 MIR8485-201ENST00000401372 91 ntBASIC-0.68□□□□□ -2.52
VSX1Q9NZR4 RNU7-151P-201ENST00000516930 53 ntBASIC-0.68□□□□□ -2.52
VSX1Q9NZR4 MIR5683-201ENST00000636514 76 ntBASIC-0.68□□□□□ -2.52
VSX1Q9NZR4 MIR147A-201ENST00000385079 72 ntBASIC-0.69□□□□□ -2.52
VSX1Q9NZR4 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.69□□□□□ -2.52
VSX1Q9NZR4 SNORD116.2-201ENST00000391251 93 ntBASIC-0.69□□□□□ -2.52
VSX1Q9NZR4 MIR4441-201ENST00000582623 100 ntBASIC-0.69□□□□□ -2.52
VSX1Q9NZR4 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.7□□□□□ -2.52
VSX1Q9NZR4 SNORA40B-201ENST00000385573 128 ntBASIC-0.7□□□□□ -2.52
VSX1Q9NZR4 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.7□□□□□ -2.52
VSX1Q9NZR4 MIR4723-201ENST00000585070 81 ntBASIC-0.7□□□□□ -2.52
VSX1Q9NZR4 RNY4P27-201ENST00000363341 96 ntBASIC-0.71□□□□□ -2.52
VSX1Q9NZR4 RNU6-431P-201ENST00000383874 107 ntBASIC-0.71□□□□□ -2.52
VSX1Q9NZR4 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.71□□□□□ -2.52
VSX1Q9NZR4 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.72□□□□□ -2.52
VSX1Q9NZR4 RNU7-134P-201ENST00000458997 64 ntBASIC-0.72□□□□□ -2.52
VSX1Q9NZR4 MIR198-201ENST00000637333 62 ntBASIC-0.72□□□□□ -2.52
VSX1Q9NZR4 SNORD114-3-201ENST00000364969 75 ntBASIC-0.73□□□□□ -2.53
VSX1Q9NZR4 RNU6-706P-201ENST00000517229 104 ntBASIC-0.73□□□□□ -2.53
VSX1Q9NZR4 MIR3170-201ENST00000582699 77 ntBASIC-0.73□□□□□ -2.53
VSX1Q9NZR4 MIR7978-201ENST00000636158 59 ntBASIC-0.73□□□□□ -2.53
VSX1Q9NZR4 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.74□□□□□ -2.53
VSX1Q9NZR4 RNU6-499P-201ENST00000365615 107 ntBASIC-0.74□□□□□ -2.53
VSX1Q9NZR4 MIR125B1-201ENST00000385236 88 ntBASIC-0.74□□□□□ -2.53
VSX1Q9NZR4 SNORD64-201ENST00000386683 67 ntBASIC-0.74□□□□□ -2.53
VSX1Q9NZR4 HLA-S-202ENST00000425174 53 ntBASIC-0.74□□□□□ -2.53
VSX1Q9NZR4 MIR382-201ENST00000637119 76 ntBASIC-0.74□□□□□ -2.53
VSX1Q9NZR4 RNU6-810P-201ENST00000364001 107 ntBASIC-0.75□□□□□ -2.53
VSX1Q9NZR4 RNU6-828P-201ENST00000364876 107 ntBASIC-0.75□□□□□ -2.53
VSX1Q9NZR4 RNU6-247P-201ENST00000362636 107 ntBASIC-0.76□□□□□ -2.53
VSX1Q9NZR4 MIR1207-201ENST00000408249 87 ntBASIC-0.76□□□□□ -2.53
VSX1Q9NZR4 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.76□□□□□ -2.53
VSX1Q9NZR4 SNORA40.16-201ENST00000517238 121 ntBASIC-0.77□□□□□ -2.53
VSX1Q9NZR4 MIR5591-201ENST00000578248 65 ntBASIC-0.77□□□□□ -2.53
VSX1Q9NZR4 MIR23C-201ENST00000579846 100 ntBASIC-0.77□□□□□ -2.53
VSX1Q9NZR4 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.78□□□□□ -2.53
VSX1Q9NZR4 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.78□□□□□ -2.53
VSX1Q9NZR4 MIR579-201ENST00000385221 98 ntBASIC-0.78□□□□□ -2.53
VSX1Q9NZR4 MIR496-201ENST00000385226 102 ntBASIC-0.78□□□□□ -2.53
VSX1Q9NZR4 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.79□□□□□ -2.54
VSX1Q9NZR4 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.79□□□□□ -2.54
VSX1Q9NZR4 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.79□□□□□ -2.54
VSX1Q9NZR4 SNORD45.2-201ENST00000363552 72 ntBASIC-0.8□□□□□ -2.54
VSX1Q9NZR4 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.81□□□□□ -2.54
VSX1Q9NZR4 MIR29B1-201ENST00000385015 81 ntBASIC-0.81□□□□□ -2.54
VSX1Q9NZR4 snoU83B.1-201ENST00000517136 88 ntBASIC-0.81□□□□□ -2.54
VSX1Q9NZR4 AP002795.1-201ENST00000534879 84 ntBASIC-0.81□□□□□ -2.54
VSX1Q9NZR4 AC079150.2-201ENST00000443733 78 ntBASIC-0.82□□□□□ -2.54
VSX1Q9NZR4 RNU6-983P-201ENST00000516004 103 ntBASIC-0.82□□□□□ -2.54
VSX1Q9NZR4 SNORA27.2-201ENST00000363365 126 ntBASIC-0.83□□□□□ -2.54
VSX1Q9NZR4 RNU6-829P-201ENST00000363700 112 ntBASIC-0.83□□□□□ -2.54
VSX1Q9NZR4 MIR507-201ENST00000385234 94 ntBASIC-0.83□□□□□ -2.54
VSX1Q9NZR4 MIR4520-1-201ENST00000582609 70 ntBASIC-0.83□□□□□ -2.54
VSX1Q9NZR4 MIR633-201ENST00000384821 98 ntBASIC-0.84□□□□□ -2.54
VSX1Q9NZR4 AC138207.3-201ENST00000585289 166 ntBASIC-0.84□□□□□ -2.54
VSX1Q9NZR4 RNU6-446P-201ENST00000362827 106 ntBASIC-0.85□□□□□ -2.55
VSX1Q9NZR4 RNU6-118P-201ENST00000516552 102 ntBASIC-0.85□□□□□ -2.55
VSX1Q9NZR4 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.85□□□□□ -2.55
VSX1Q9NZR4 SNORD63.2-201ENST00000516303 64 ntBASIC-0.86□□□□□ -2.55
VSX1Q9NZR4 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.87□□□□□ -2.55
VSX1Q9NZR4 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.87□□□□□ -2.55
VSX1Q9NZR4 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.88□□□□□ -2.55
VSX1Q9NZR4 MIR520D-201ENST00000385002 87 ntBASIC-0.88□□□□□ -2.55
VSX1Q9NZR4 RNA5SP86-201ENST00000390869 98 ntBASIC-0.88□□□□□ -2.55
VSX1Q9NZR4 RNA5SP93-201ENST00000362525 114 ntBASIC-0.89□□□□□ -2.55
VSX1Q9NZR4 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.89□□□□□ -2.55
VSX1Q9NZR4 SNORD18.1-201ENST00000363807 70 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 248 ms