Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 SNORD114-15-201ENST00000364687 72 ntBASIC-0.22□□□□□ -2.44
TRIM56Q9BRZ2 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.22□□□□□ -2.44
TRIM56Q9BRZ2 MIR8064-201ENST00000612863 90 ntBASIC-0.22□□□□□ -2.44
TRIM56Q9BRZ2 MIR5683-201ENST00000636514 76 ntBASIC-0.22□□□□□ -2.44
TRIM56Q9BRZ2 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.24□□□□□ -2.45
TRIM56Q9BRZ2 RNU6-30P-201ENST00000384561 107 ntBASIC-0.24□□□□□ -2.45
TRIM56Q9BRZ2 AC021146.6-201ENST00000514659 117 ntBASIC-0.24□□□□□ -2.45
TRIM56Q9BRZ2 SNORD114-28-201ENST00000363610 72 ntBASIC-0.25□□□□□ -2.45
TRIM56Q9BRZ2 SNORD114-17-201ENST00000364699 75 ntBASIC-0.25□□□□□ -2.45
TRIM56Q9BRZ2 RNA5SP169-201ENST00000517268 117 ntBASIC-0.25□□□□□ -2.45
TRIM56Q9BRZ2 SNORD95.1-201ENST00000364099 68 ntBASIC-0.26□□□□□ -2.45
TRIM56Q9BRZ2 MIR1468-201ENST00000410600 86 ntBASIC-0.26□□□□□ -2.45
TRIM56Q9BRZ2 RNU6-974P-201ENST00000384099 108 ntBASIC-0.27□□□□□ -2.45
TRIM56Q9BRZ2 RNU6-930P-201ENST00000390938 100 ntBASIC-0.27□□□□□ -2.45
TRIM56Q9BRZ2 SNORA27.2-201ENST00000363365 126 ntBASIC-0.28□□□□□ -2.45
TRIM56Q9BRZ2 MIR520D-201ENST00000385002 87 ntBASIC-0.28□□□□□ -2.45
TRIM56Q9BRZ2 RNU6-838P-201ENST00000363399 108 ntBASIC-0.29□□□□□ -2.46
TRIM56Q9BRZ2 RNU6-721P-201ENST00000410155 105 ntBASIC-0.3□□□□□ -2.46
TRIM56Q9BRZ2 AP002795.1-201ENST00000534879 84 ntBASIC-0.3□□□□□ -2.46
TRIM56Q9BRZ2 RNA5SP451-201ENST00000410588 110 ntBASIC-0.31□□□□□ -2.46
TRIM56Q9BRZ2 RNA5SP275-201ENST00000363936 118 ntBASIC-0.32□□□□□ -2.46
TRIM56Q9BRZ2 RNU6-320P-201ENST00000516511 106 ntBASIC-0.32□□□□□ -2.46
TRIM56Q9BRZ2 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.32□□□□□ -2.46
TRIM56Q9BRZ2 RNU6-258P-201ENST00000390884 101 ntBASIC-0.34□□□□□ -2.46
TRIM56Q9BRZ2 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.34□□□□□ -2.46
TRIM56Q9BRZ2 RPS29P8-201ENST00000445109 171 ntBASIC-0.34□□□□□ -2.46
TRIM56Q9BRZ2 SNORD14C-201ENST00000365382 88 ntBASIC-0.36□□□□□ -2.47
TRIM56Q9BRZ2 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.36□□□□□ -2.47
TRIM56Q9BRZ2 RNU6-530P-201ENST00000391180 107 ntBASIC-0.36□□□□□ -2.47
TRIM56Q9BRZ2 MIR29B1-201ENST00000385015 81 ntBASIC-0.37□□□□□ -2.47
TRIM56Q9BRZ2 MIR548AL-201ENST00000578416 97 ntBASIC-0.37□□□□□ -2.47
TRIM56Q9BRZ2 RNA5SP331-201ENST00000364986 107 ntBASIC-0.38□□□□□ -2.47
TRIM56Q9BRZ2 RNU6-608P-201ENST00000383927 104 ntBASIC-0.38□□□□□ -2.47
TRIM56Q9BRZ2 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.38□□□□□ -2.47
TRIM56Q9BRZ2 MIR224-201ENST00000384889 81 ntBASIC-0.38□□□□□ -2.47
TRIM56Q9BRZ2 MIR548F3-201ENST00000408509 87 ntBASIC-0.38□□□□□ -2.47
TRIM56Q9BRZ2 MIR548AZ-201ENST00000616567 95 ntBASIC-0.38□□□□□ -2.47
TRIM56Q9BRZ2 MIR409-201ENST00000362237 79 ntBASIC-0.39□□□□□ -2.47
TRIM56Q9BRZ2 SNORA32.3-201ENST00000384772 121 ntBASIC-0.39□□□□□ -2.47
TRIM56Q9BRZ2 MIR507-201ENST00000385234 94 ntBASIC-0.4□□□□□ -2.47
TRIM56Q9BRZ2 SNORD126-201ENST00000459475 77 ntBASIC-0.4□□□□□ -2.47
TRIM56Q9BRZ2 MIR3681-201ENST00000580089 72 ntBASIC-0.4□□□□□ -2.47
TRIM56Q9BRZ2 SNORD114-14-201ENST00000362723 75 ntBASIC-0.41□□□□□ -2.48
TRIM56Q9BRZ2 RNU4-63P-201ENST00000411313 118 ntBASIC-0.41□□□□□ -2.48
TRIM56Q9BRZ2 RNA5SP67-201ENST00000516422 131 ntBASIC-0.41□□□□□ -2.48
TRIM56Q9BRZ2 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.41□□□□□ -2.48
TRIM56Q9BRZ2 SNORA3B-201ENST00000391305 131 ntBASIC-0.42□□□□□ -2.48
TRIM56Q9BRZ2 MIR23C-201ENST00000579846 100 ntBASIC-0.44□□□□□ -2.48
TRIM56Q9BRZ2 RNU6-284P-201ENST00000411105 106 ntBASIC-0.45□□□□□ -2.48
TRIM56Q9BRZ2 MIR548AX-201ENST00000580117 73 ntBASIC-0.45□□□□□ -2.48
TRIM56Q9BRZ2 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.46□□□□□ -2.48
TRIM56Q9BRZ2 MIR196A2-201ENST00000385189 110 ntBASIC-0.46□□□□□ -2.48
TRIM56Q9BRZ2 RPL35AP4-201ENST00000412007 102 ntBASIC-0.48□□□□□ -2.49
TRIM56Q9BRZ2 RNA5SP266-201ENST00000410273 108 ntBASIC-0.49□□□□□ -2.49
TRIM56Q9BRZ2 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.5□□□□□ -2.49
TRIM56Q9BRZ2 MIR4426-201ENST00000640330 63 ntBASIC-0.5□□□□□ -2.49
TRIM56Q9BRZ2 RNU6-361P-201ENST00000364454 107 ntBASIC-0.51□□□□□ -2.49
TRIM56Q9BRZ2 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.51□□□□□ -2.49
TRIM56Q9BRZ2 RNU6-742P-201ENST00000365289 107 ntBASIC-0.52□□□□□ -2.49
TRIM56Q9BRZ2 MIR147A-201ENST00000385079 72 ntBASIC-0.52□□□□□ -2.49
TRIM56Q9BRZ2 RNY1P9-201ENST00000532431 109 ntBASIC-0.52□□□□□ -2.49
TRIM56Q9BRZ2 MIR545-201ENST00000385085 106 ntBASIC-0.54□□□□□ -2.5
TRIM56Q9BRZ2 RNY3P8-201ENST00000411366 126 ntBASIC-0.54□□□□□ -2.5
TRIM56Q9BRZ2 MT-TQ-201ENST00000387372 72 ntBASIC-0.55□□□□□ -2.5
TRIM56Q9BRZ2 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.55□□□□□ -2.5
TRIM56Q9BRZ2 MIR202-201ENST00000362219 110 ntBASIC-0.56□□□□□ -2.5
TRIM56Q9BRZ2 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.56□□□□□ -2.5
TRIM56Q9BRZ2 MIR4436A-201ENST00000585278 85 ntBASIC-0.56□□□□□ -2.5
TRIM56Q9BRZ2 SNORA17.4-201ENST00000391287 132 ntBASIC-0.57□□□□□ -2.5
TRIM56Q9BRZ2 SNORD60-201ENST00000383903 83 ntBASIC-0.58□□□□□ -2.5
TRIM56Q9BRZ2 AC090616.4-201ENST00000448026 115 ntBASIC-0.58□□□□□ -2.5
TRIM56Q9BRZ2 RNU6-176P-201ENST00000517196 105 ntBASIC-0.58□□□□□ -2.5
TRIM56Q9BRZ2 RNU6-431P-201ENST00000383874 107 ntBASIC-0.59□□□□□ -2.5
TRIM56Q9BRZ2 RNA5SP26-201ENST00000362406 119 ntBASIC-0.6□□□□□ -2.51
TRIM56Q9BRZ2 RNU6-300P-201ENST00000459080 104 ntBASIC-0.6□□□□□ -2.51
TRIM56Q9BRZ2 SNORD64-201ENST00000386683 67 ntBASIC-0.61□□□□□ -2.51
TRIM56Q9BRZ2 MIR4317-201ENST00000637586 65 ntBASIC-0.62□□□□□ -2.51
TRIM56Q9BRZ2 snoU83B.1-201ENST00000517136 88 ntBASIC-0.63□□□□□ -2.51
TRIM56Q9BRZ2 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.64□□□□□ -2.51
TRIM56Q9BRZ2 SCARNA17-201ENST00000516183 144 ntBASIC-0.64□□□□□ -2.51
TRIM56Q9BRZ2 RNU6-986P-201ENST00000363133 102 ntBASIC-0.65□□□□□ -2.51
TRIM56Q9BRZ2 RNU6-822P-201ENST00000362707 106 ntBASIC-0.66□□□□□ -2.52
TRIM56Q9BRZ2 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.66□□□□□ -2.52
TRIM56Q9BRZ2 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
TRIM56Q9BRZ2 SNX3P1X-201ENST00000414887 175 ntBASIC-0.67□□□□□ -2.52
TRIM56Q9BRZ2 MIR6818-201ENST00000621576 65 ntBASIC-0.67□□□□□ -2.52
TRIM56Q9BRZ2 MIR4324-201ENST00000584846 72 ntBASIC-0.68□□□□□ -2.52
TRIM56Q9BRZ2 MIR382-201ENST00000637119 76 ntBASIC-0.68□□□□□ -2.52
TRIM56Q9BRZ2 MIR548H4-201ENST00000408689 111 ntBASIC-0.69□□□□□ -2.52
TRIM56Q9BRZ2 AC120024.2-201ENST00000576526 175 ntBASIC-0.69□□□□□ -2.52
TRIM56Q9BRZ2 MIR6738-201ENST00000619620 64 ntBASIC-0.69□□□□□ -2.52
TRIM56Q9BRZ2 SNORD114-25-201ENST00000363742 72 ntBASIC-0.7□□□□□ -2.52
TRIM56Q9BRZ2 MIR548N-201ENST00000408742 75 ntBASIC-0.7□□□□□ -2.52
TRIM56Q9BRZ2 AC018880.2-201ENST00000414265 201 ntBASIC-0.7□□□□□ -2.52
TRIM56Q9BRZ2 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.7□□□□□ -2.52
TRIM56Q9BRZ2 RNU6-10P-201ENST00000384036 107 ntBASIC-0.71□□□□□ -2.52
TRIM56Q9BRZ2 MIR587-201ENST00000384845 96 ntBASIC-0.71□□□□□ -2.52
TRIM56Q9BRZ2 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.72□□□□□ -2.52
TRIM56Q9BRZ2 MIR196A1-201ENST00000388006 70 ntBASIC-0.72□□□□□ -2.52
TRIM56Q9BRZ2 MIR4320-201ENST00000636981 65 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms