Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MIR1245B-201ENST00000636115 69 ntBASIC-1.49□□□□□ -2.65
VPS33AQ96AX1 RNU6-810P-201ENST00000364001 107 ntBASIC-1.5□□□□□ -2.65
VPS33AQ96AX1 RNY1P1-201ENST00000364372 112 ntBASIC-1.5□□□□□ -2.65
VPS33AQ96AX1 RNA5SP173-201ENST00000364857 136 ntBASIC-1.5□□□□□ -2.65
VPS33AQ96AX1 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.5□□□□□ -2.65
VPS33AQ96AX1 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.5□□□□□ -2.65
VPS33AQ96AX1 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.5□□□□□ -2.65
VPS33AQ96AX1 RNU6-313P-201ENST00000516317 112 ntBASIC-1.5□□□□□ -2.65
VPS33AQ96AX1 IGLL4P-201ENST00000614590 133 ntBASIC-1.5□□□□□ -2.65
VPS33AQ96AX1 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.51□□□□□ -2.65
VPS33AQ96AX1 SNORD20-201ENST00000384550 80 ntBASIC-1.51□□□□□ -2.65
VPS33AQ96AX1 RNU6-520P-201ENST00000384717 104 ntBASIC-1.51□□□□□ -2.65
VPS33AQ96AX1 MIR154-201ENST00000385243 84 ntBASIC-1.51□□□□□ -2.65
VPS33AQ96AX1 MIR3910-1-201ENST00000580936 111 ntBASIC-1.51□□□□□ -2.65
VPS33AQ96AX1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.51□□□□□ -2.65
VPS33AQ96AX1 MIR202-201ENST00000362219 110 ntBASIC-1.52□□□□□ -2.65
VPS33AQ96AX1 RNU6-215P-201ENST00000365169 102 ntBASIC-1.52□□□□□ -2.65
VPS33AQ96AX1 SNORD113-1-201ENST00000365321 69 ntBASIC-1.52□□□□□ -2.65
VPS33AQ96AX1 MIR548N-201ENST00000408742 75 ntBASIC-1.52□□□□□ -2.65
VPS33AQ96AX1 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.52□□□□□ -2.65
VPS33AQ96AX1 RNU6-542P-201ENST00000516405 103 ntBASIC-1.52□□□□□ -2.65
VPS33AQ96AX1 RNU6-68P-201ENST00000516576 104 ntBASIC-1.52□□□□□ -2.65
VPS33AQ96AX1 MIR1285-2-201ENST00000408311 88 ntBASIC-1.53□□□□□ -2.65
VPS33AQ96AX1 RNU6-380P-201ENST00000410207 107 ntBASIC-1.53□□□□□ -2.65
VPS33AQ96AX1 RNU6-789P-201ENST00000517105 102 ntBASIC-1.53□□□□□ -2.65
VPS33AQ96AX1 RNU6-231P-201ENST00000517122 103 ntBASIC-1.53□□□□□ -2.65
VPS33AQ96AX1 RNU6-895P-201ENST00000384125 103 ntBASIC-1.54□□□□□ -2.66
VPS33AQ96AX1 RNA5SP89-201ENST00000410300 108 ntBASIC-1.54□□□□□ -2.66
VPS33AQ96AX1 RNU7-160P-201ENST00000516660 62 ntBASIC-1.54□□□□□ -2.66
VPS33AQ96AX1 MIR7110-201ENST00000612638 86 ntBASIC-1.54□□□□□ -2.66
VPS33AQ96AX1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.54□□□□□ -2.66
VPS33AQ96AX1 RNA5SP405-201ENST00000363059 114 ntBASIC-1.55□□□□□ -2.66
VPS33AQ96AX1 SNORA40.16-201ENST00000517238 121 ntBASIC-1.55□□□□□ -2.66
VPS33AQ96AX1 MIR4666B-201ENST00000578142 81 ntBASIC-1.55□□□□□ -2.66
VPS33AQ96AX1 SNORD18C-201ENST00000362704 69 ntBASIC-1.56□□□□□ -2.66
VPS33AQ96AX1 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.56□□□□□ -2.66
VPS33AQ96AX1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.56□□□□□ -2.66
VPS33AQ96AX1 RNU6-361P-201ENST00000364454 107 ntBASIC-1.57□□□□□ -2.66
VPS33AQ96AX1 RNU6-44P-201ENST00000384045 107 ntBASIC-1.57□□□□□ -2.66
VPS33AQ96AX1 RNU6-649P-201ENST00000384463 107 ntBASIC-1.57□□□□□ -2.66
VPS33AQ96AX1 SNORD116.2-201ENST00000391251 93 ntBASIC-1.57□□□□□ -2.66
VPS33AQ96AX1 MIR494-201ENST00000349529 81 ntBASIC-1.58□□□□□ -2.66
VPS33AQ96AX1 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.58□□□□□ -2.66
VPS33AQ96AX1 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.58□□□□□ -2.66
VPS33AQ96AX1 RNU6-828P-201ENST00000364876 107 ntBASIC-1.59□□□□□ -2.66
VPS33AQ96AX1 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.59□□□□□ -2.66
VPS33AQ96AX1 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.59□□□□□ -2.66
VPS33AQ96AX1 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.59□□□□□ -2.66
VPS33AQ96AX1 SNORA17.4-201ENST00000391287 132 ntBASIC-1.59□□□□□ -2.66
VPS33AQ96AX1 MIR4748-201ENST00000578076 82 ntBASIC-1.59□□□□□ -2.66
VPS33AQ96AX1 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.6□□□□□ -2.67
VPS33AQ96AX1 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.6□□□□□ -2.67
VPS33AQ96AX1 SNORA40B-201ENST00000385573 128 ntBASIC-1.6□□□□□ -2.67
VPS33AQ96AX1 AC097484.2-201ENST00000509147 251 ntBASIC-1.6□□□□□ -2.67
VPS33AQ96AX1 RNU6-118P-201ENST00000516552 102 ntBASIC-1.6□□□□□ -2.67
VPS33AQ96AX1 RNU6-919P-201ENST00000516731 104 ntBASIC-1.6□□□□□ -2.67
VPS33AQ96AX1 RNU6-912P-201ENST00000363800 104 ntBASIC-1.61□□□□□ -2.67
VPS33AQ96AX1 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.61□□□□□ -2.67
VPS33AQ96AX1 RNU6-411P-201ENST00000384451 107 ntBASIC-1.61□□□□□ -2.67
VPS33AQ96AX1 AL606753.1-201ENST00000427435 87 ntBASIC-1.61□□□□□ -2.67
VPS33AQ96AX1 RNU6-122P-201ENST00000516818 107 ntBASIC-1.61□□□□□ -2.67
VPS33AQ96AX1 RNU6-194P-201ENST00000363862 105 ntBASIC-1.62□□□□□ -2.67
VPS33AQ96AX1 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.62□□□□□ -2.67
VPS33AQ96AX1 SNORD113-3-201ENST00000364830 72 ntBASIC-1.62□□□□□ -2.67
VPS33AQ96AX1 SNORD60-201ENST00000383903 83 ntBASIC-1.62□□□□□ -2.67
VPS33AQ96AX1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
VPS33AQ96AX1 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
VPS33AQ96AX1 RNU6-530P-201ENST00000391180 107 ntBASIC-1.62□□□□□ -2.67
VPS33AQ96AX1 RNY4P30-201ENST00000410216 95 ntBASIC-1.62□□□□□ -2.67
VPS33AQ96AX1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.62□□□□□ -2.67
VPS33AQ96AX1 MIR3139-201ENST00000579145 76 ntBASIC-1.62□□□□□ -2.67
VPS33AQ96AX1 SNORA25.5-201ENST00000363782 126 ntBASIC-1.63□□□□□ -2.67
VPS33AQ96AX1 RNU6-634P-201ENST00000459134 106 ntBASIC-1.63□□□□□ -2.67
VPS33AQ96AX1 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.63□□□□□ -2.67
VPS33AQ96AX1 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.64□□□□□ -2.67
VPS33AQ96AX1 RNU6-153P-201ENST00000364422 104 ntBASIC-1.65□□□□□ -2.67
VPS33AQ96AX1 RNU6-742P-201ENST00000365289 107 ntBASIC-1.65□□□□□ -2.67
VPS33AQ96AX1 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.65□□□□□ -2.67
VPS33AQ96AX1 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.65□□□□□ -2.67
VPS33AQ96AX1 MIR4441-201ENST00000582623 100 ntBASIC-1.65□□□□□ -2.67
VPS33AQ96AX1 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.65□□□□□ -2.67
VPS33AQ96AX1 FTX_4.1-201ENST00000616291 147 ntBASIC-1.65□□□□□ -2.67
VPS33AQ96AX1 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.65□□□□□ -2.67
VPS33AQ96AX1 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.65□□□□□ -2.67
VPS33AQ96AX1 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.65□□□□□ -2.67
VPS33AQ96AX1 RNU6-663P-201ENST00000391105 106 ntBASIC-1.66□□□□□ -2.68
VPS33AQ96AX1 AC062037.1-201ENST00000605302 128 ntBASIC-1.66□□□□□ -2.68
VPS33AQ96AX1 MIR450A2-201ENST00000385022 100 ntBASIC-1.67□□□□□ -2.68
VPS33AQ96AX1 AL451105.1-201ENST00000450005 189 ntBASIC-1.67□□□□□ -2.68
VPS33AQ96AX1 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.67□□□□□ -2.68
VPS33AQ96AX1 RNU6-141P-201ENST00000410499 105 ntBASIC-1.68□□□□□ -2.68
VPS33AQ96AX1 MIR466-201ENST00000580653 84 ntBASIC-1.68□□□□□ -2.68
VPS33AQ96AX1 U7.4-201ENST00000614961 63 ntBASIC-1.68□□□□□ -2.68
VPS33AQ96AX1 MIR4426-201ENST00000640330 63 ntBASIC-1.68□□□□□ -2.68
VPS33AQ96AX1 MIR365A-201ENST00000362260 87 ntBASIC-1.69□□□□□ -2.68
VPS33AQ96AX1 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.69□□□□□ -2.68
VPS33AQ96AX1 RNU6-294P-201ENST00000364999 102 ntBASIC-1.69□□□□□ -2.68
VPS33AQ96AX1 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.69□□□□□ -2.68
VPS33AQ96AX1 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.69□□□□□ -2.68
VPS33AQ96AX1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms