Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MIR23C-201ENST00000579846 100 ntBASIC0.57□□□□□ -2.32
NKX2-3Q8TAU0 MIR4514-201ENST00000581410 57 ntBASIC0.57□□□□□ -2.32
NKX2-3Q8TAU0 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.56□□□□□ -2.32
NKX2-3Q8TAU0 Y_RNA.129-201ENST00000363392 110 ntBASIC0.54□□□□□ -2.32
NKX2-3Q8TAU0 AL445193.1-201ENST00000441183 141 ntBASIC0.54□□□□□ -2.32
NKX2-3Q8TAU0 RNU7-159P-201ENST00000459284 62 ntBASIC0.53□□□□□ -2.32
NKX2-3Q8TAU0 MIR593-201ENST00000384856 100 ntBASIC0.52□□□□□ -2.33
NKX2-3Q8TAU0 SNORD38.3-201ENST00000516599 73 ntBASIC0.52□□□□□ -2.33
NKX2-3Q8TAU0 MIR518B-201ENST00000385127 83 ntBASIC0.51□□□□□ -2.33
NKX2-3Q8TAU0 RPL35AP4-201ENST00000412007 102 ntBASIC0.51□□□□□ -2.33
NKX2-3Q8TAU0 RNU6-46P-201ENST00000383860 107 ntBASIC0.5□□□□□ -2.33
NKX2-3Q8TAU0 SNX3P1X-201ENST00000414887 175 ntBASIC0.5□□□□□ -2.33
NKX2-3Q8TAU0 Y_RNA.382-201ENST00000365672 114 ntBASIC0.49□□□□□ -2.33
NKX2-3Q8TAU0 MIR145-201ENST00000384967 88 ntBASIC0.49□□□□□ -2.33
NKX2-3Q8TAU0 SNORD22.1-201ENST00000516331 125 ntBASIC0.45□□□□□ -2.34
NKX2-3Q8TAU0 RNA5SP66-201ENST00000517178 101 ntBASIC0.45□□□□□ -2.34
NKX2-3Q8TAU0 Y_RNA.134-201ENST00000363435 105 ntBASIC0.44□□□□□ -2.34
NKX2-3Q8TAU0 SNORD49B-201ENST00000365172 72 ntBASIC0.44□□□□□ -2.34
NKX2-3Q8TAU0 SNORD75.1-201ENST00000408373 60 ntBASIC0.44□□□□□ -2.34
NKX2-3Q8TAU0 Y_RNA.603-201ENST00000410571 108 ntBASIC0.44□□□□□ -2.34
NKX2-3Q8TAU0 RNA5SP214-201ENST00000363378 118 ntBASIC0.43□□□□□ -2.34
NKX2-3Q8TAU0 MIR581-201ENST00000384895 96 ntBASIC0.43□□□□□ -2.34
NKX2-3Q8TAU0 SNORA13-201ENST00000458790 133 ntBASIC0.43□□□□□ -2.34
NKX2-3Q8TAU0 RNU6-68P-201ENST00000516576 104 ntBASIC0.43□□□□□ -2.34
NKX2-3Q8TAU0 U4.2-201ENST00000618561 85 ntBASIC0.43□□□□□ -2.34
NKX2-3Q8TAU0 AC013734.1-201ENST00000619329 111 ntBASIC0.43□□□□□ -2.34
NKX2-3Q8TAU0 MIR604-201ENST00000384880 94 ntBASIC0.42□□□□□ -2.34
NKX2-3Q8TAU0 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.42□□□□□ -2.34
NKX2-3Q8TAU0 MIR379-201ENST00000362218 67 ntBASIC0.41□□□□□ -2.34
NKX2-3Q8TAU0 Y_RNA.223-201ENST00000364290 113 ntBASIC0.41□□□□□ -2.34
NKX2-3Q8TAU0 SNORD114-17-201ENST00000364699 75 ntBASIC0.41□□□□□ -2.34
NKX2-3Q8TAU0 Y_RNA.610-201ENST00000410681 103 ntBASIC0.41□□□□□ -2.34
NKX2-3Q8TAU0 AL590491.3-201ENST00000610731 82 ntBASIC0.41□□□□□ -2.34
NKX2-3Q8TAU0 AC093726.3-201ENST00000637588 150 ntBASIC0.41□□□□□ -2.34
NKX2-3Q8TAU0 SNORD114-31-201ENST00000363219 75 ntBASIC0.4□□□□□ -2.35
NKX2-3Q8TAU0 Y_RNA.189-201ENST00000363959 112 ntBASIC0.39□□□□□ -2.35
NKX2-3Q8TAU0 RNA5SP134-201ENST00000516492 96 ntBASIC0.39□□□□□ -2.35
NKX2-3Q8TAU0 SNORD114-9-201ENST00000364370 72 ntBASIC0.38□□□□□ -2.35
NKX2-3Q8TAU0 MIR507-201ENST00000385234 94 ntBASIC0.38□□□□□ -2.35
NKX2-3Q8TAU0 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
NKX2-3Q8TAU0 SNORD115.2-201ENST00000391126 59 ntBASIC0.38□□□□□ -2.35
NKX2-3Q8TAU0 MIR4493-201ENST00000584016 73 ntBASIC0.37□□□□□ -2.35
NKX2-3Q8TAU0 Y_RNA.320-201ENST00000365144 102 ntBASIC0.36□□□□□ -2.35
NKX2-3Q8TAU0 AC104692.1-201ENST00000472406 90 ntBASIC0.36□□□□□ -2.35
NKX2-3Q8TAU0 AP001180.6-201ENST00000584918 159 ntBASIC0.36□□□□□ -2.35
NKX2-3Q8TAU0 MIR1207-201ENST00000408249 87 ntBASIC0.35□□□□□ -2.35
NKX2-3Q8TAU0 MIR3179-1-201ENST00000578940 84 ntBASIC0.35□□□□□ -2.35
NKX2-3Q8TAU0 MIR3179-2-201ENST00000579107 84 ntBASIC0.35□□□□□ -2.35
NKX2-3Q8TAU0 MIR3179-3-201ENST00000579566 84 ntBASIC0.35□□□□□ -2.35
NKX2-3Q8TAU0 MIR3179-4-201ENST00000617599 84 ntBASIC0.35□□□□□ -2.35
NKX2-3Q8TAU0 RNU6-836P-201ENST00000362920 107 ntBASIC0.34□□□□□ -2.36
NKX2-3Q8TAU0 AP000533.3-201ENST00000447704 118 ntBASIC0.34□□□□□ -2.36
NKX2-3Q8TAU0 MIR4263-201ENST00000584745 83 ntBASIC0.34□□□□□ -2.36
NKX2-3Q8TAU0 MIR6718-201ENST00000616153 80 ntBASIC0.34□□□□□ -2.36
NKX2-3Q8TAU0 Y_RNA.781-201ENST00000620301 103 ntBASIC0.34□□□□□ -2.36
NKX2-3Q8TAU0 SNORD18C-201ENST00000362704 69 ntBASIC0.33□□□□□ -2.36
NKX2-3Q8TAU0 RNU6-1091P-201ENST00000363945 107 ntBASIC0.33□□□□□ -2.36
NKX2-3Q8TAU0 AC120024.2-201ENST00000576526 175 ntBASIC0.33□□□□□ -2.36
NKX2-3Q8TAU0 Y_RNA.519-201ENST00000384553 102 ntBASIC0.32□□□□□ -2.36
NKX2-3Q8TAU0 AC090616.4-201ENST00000448026 115 ntBASIC0.32□□□□□ -2.36
NKX2-3Q8TAU0 MIR5190-201ENST00000581537 80 ntBASIC0.32□□□□□ -2.36
NKX2-3Q8TAU0 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.32□□□□□ -2.36
NKX2-3Q8TAU0 RNU6-929P-201ENST00000384429 107 ntBASIC0.31□□□□□ -2.36
NKX2-3Q8TAU0 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.31□□□□□ -2.36
NKX2-3Q8TAU0 SNORD114-5-201ENST00000362928 70 ntBASIC0.3□□□□□ -2.36
NKX2-3Q8TAU0 SNORD95.1-201ENST00000364099 68 ntBASIC0.3□□□□□ -2.36
NKX2-3Q8TAU0 MIR371B-201ENST00000638082 66 ntBASIC0.3□□□□□ -2.36
NKX2-3Q8TAU0 SNORA32.1-201ENST00000364514 115 ntBASIC0.29□□□□□ -2.36
NKX2-3Q8TAU0 MIR204-201ENST00000385200 110 ntBASIC0.29□□□□□ -2.36
NKX2-3Q8TAU0 MIR601-201ENST00000385256 79 ntBASIC0.29□□□□□ -2.36
NKX2-3Q8TAU0 RPS29P8-201ENST00000445109 171 ntBASIC0.29□□□□□ -2.36
NKX2-3Q8TAU0 U6.97-201ENST00000636904 101 ntBASIC0.29□□□□□ -2.36
NKX2-3Q8TAU0 Y_RNA.468-201ENST00000384298 102 ntBASIC0.28□□□□□ -2.36
NKX2-3Q8TAU0 RNU6-563P-201ENST00000364872 108 ntBASIC0.27□□□□□ -2.37
NKX2-3Q8TAU0 RNA5SP224-201ENST00000365069 126 ntBASIC0.27□□□□□ -2.37
NKX2-3Q8TAU0 MIR4768-201ENST00000585270 74 ntBASIC0.27□□□□□ -2.37
NKX2-3Q8TAU0 RNA5SP26-201ENST00000362406 119 ntBASIC0.26□□□□□ -2.37
NKX2-3Q8TAU0 SNORA18.1-201ENST00000363418 128 ntBASIC0.26□□□□□ -2.37
NKX2-3Q8TAU0 Y_RNA.514-201ENST00000384528 112 ntBASIC0.26□□□□□ -2.37
NKX2-3Q8TAU0 MIR548AJ2-201ENST00000408539 92 ntBASIC0.25□□□□□ -2.37
NKX2-3Q8TAU0 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
NKX2-3Q8TAU0 Y_RNA.413-201ENST00000384007 102 ntBASIC0.24□□□□□ -2.37
NKX2-3Q8TAU0 Y_RNA.754-201ENST00000476024 102 ntBASIC0.24□□□□□ -2.37
NKX2-3Q8TAU0 MIR4290-201ENST00000583807 95 ntBASIC0.24□□□□□ -2.37
NKX2-3Q8TAU0 Y_RNA.790-201ENST00000614282 102 ntBASIC0.24□□□□□ -2.37
NKX2-3Q8TAU0 Y_RNA.782-201ENST00000614695 102 ntBASIC0.24□□□□□ -2.37
NKX2-3Q8TAU0 Y_RNA.260-201ENST00000364628 101 ntBASIC0.23□□□□□ -2.37
NKX2-3Q8TAU0 RNU6-695P-201ENST00000391157 104 ntBASIC0.23□□□□□ -2.37
NKX2-3Q8TAU0 MIR1295B-201ENST00000636144 60 ntBASIC0.23□□□□□ -2.37
NKX2-3Q8TAU0 MIR101-1-201ENST00000362265 75 ntBASIC0.22□□□□□ -2.37
NKX2-3Q8TAU0 MIR224-201ENST00000384889 81 ntBASIC0.22□□□□□ -2.37
NKX2-3Q8TAU0 MIR3666-201ENST00000607845 111 ntBASIC0.22□□□□□ -2.37
NKX2-3Q8TAU0 MIR4645-201ENST00000583158 77 ntBASIC0.2□□□□□ -2.38
NKX2-3Q8TAU0 SNORD114-12-201ENST00000365400 75 ntBASIC0.18□□□□□ -2.38
NKX2-3Q8TAU0 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
NKX2-3Q8TAU0 MIR548AX-201ENST00000580117 73 ntBASIC0.17□□□□□ -2.38
NKX2-3Q8TAU0 Y_RNA.335-201ENST00000365299 96 ntBASIC0.16□□□□□ -2.38
NKX2-3Q8TAU0 Y_RNA.684-201ENST00000516510 99 ntBASIC0.16□□□□□ -2.38
NKX2-3Q8TAU0 SNORD114-3-201ENST00000364969 75 ntBASIC0.14□□□□□ -2.39
NKX2-3Q8TAU0 RNA5SP451-201ENST00000410588 110 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms