Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 MIR507-201ENST00000385234 94 ntBASIC0.35□□□□□ -2.35
NEDD1Q8NHV4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
NEDD1Q8NHV4 AC023932.2-201ENST00000603176 175 ntBASIC0.35□□□□□ -2.35
NEDD1Q8NHV4 RNU6-929P-201ENST00000384429 107 ntBASIC0.34□□□□□ -2.36
NEDD1Q8NHV4 SNORD75.1-201ENST00000408373 60 ntBASIC0.34□□□□□ -2.36
NEDD1Q8NHV4 Y_RNA.189-201ENST00000363959 112 ntBASIC0.33□□□□□ -2.36
NEDD1Q8NHV4 SNORD115.2-201ENST00000391126 59 ntBASIC0.33□□□□□ -2.36
NEDD1Q8NHV4 AC090616.4-201ENST00000448026 115 ntBASIC0.33□□□□□ -2.36
NEDD1Q8NHV4 RNA5SP66-201ENST00000517178 101 ntBASIC0.33□□□□□ -2.36
NEDD1Q8NHV4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
NEDD1Q8NHV4 U6.97-201ENST00000636904 101 ntBASIC0.32□□□□□ -2.36
NEDD1Q8NHV4 RNU6-46P-201ENST00000383860 107 ntBASIC0.31□□□□□ -2.36
NEDD1Q8NHV4 AP000533.3-201ENST00000447704 118 ntBASIC0.31□□□□□ -2.36
NEDD1Q8NHV4 MIR2909-201ENST00000617113 69 ntBASIC0.31□□□□□ -2.36
NEDD1Q8NHV4 AC120024.2-201ENST00000576526 175 ntBASIC0.3□□□□□ -2.36
NEDD1Q8NHV4 RNA5SP26-201ENST00000362406 119 ntBASIC0.29□□□□□ -2.36
NEDD1Q8NHV4 HAR1A.1-201ENST00000459583 118 ntBASIC0.29□□□□□ -2.36
NEDD1Q8NHV4 AC093726.3-201ENST00000637588 150 ntBASIC0.29□□□□□ -2.36
NEDD1Q8NHV4 Y_RNA.129-201ENST00000363392 110 ntBASIC0.28□□□□□ -2.36
NEDD1Q8NHV4 RNA5SP476-201ENST00000516613 103 ntBASIC0.28□□□□□ -2.36
NEDD1Q8NHV4 MIR3179-1-201ENST00000578940 84 ntBASIC0.28□□□□□ -2.36
NEDD1Q8NHV4 MIR3179-2-201ENST00000579107 84 ntBASIC0.28□□□□□ -2.36
NEDD1Q8NHV4 MIR3179-3-201ENST00000579566 84 ntBASIC0.28□□□□□ -2.36
NEDD1Q8NHV4 MIR3179-4-201ENST00000617599 84 ntBASIC0.28□□□□□ -2.36
NEDD1Q8NHV4 MIR4645-201ENST00000583158 77 ntBASIC0.27□□□□□ -2.37
NEDD1Q8NHV4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
NEDD1Q8NHV4 MIR6086-201ENST00000638065 55 ntBASIC0.27□□□□□ -2.37
NEDD1Q8NHV4 RNU6-1091P-201ENST00000363945 107 ntBASIC0.26□□□□□ -2.37
NEDD1Q8NHV4 MIR23C-201ENST00000579846 100 ntBASIC0.26□□□□□ -2.37
NEDD1Q8NHV4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.26□□□□□ -2.37
NEDD1Q8NHV4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.25□□□□□ -2.37
NEDD1Q8NHV4 MIR548AJ2-201ENST00000408539 92 ntBASIC0.25□□□□□ -2.37
NEDD1Q8NHV4 Y_RNA.519-201ENST00000384553 102 ntBASIC0.24□□□□□ -2.37
NEDD1Q8NHV4 RNU6-695P-201ENST00000391157 104 ntBASIC0.24□□□□□ -2.37
NEDD1Q8NHV4 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
NEDD1Q8NHV4 RNU6-836P-201ENST00000362920 107 ntBASIC0.23□□□□□ -2.37
NEDD1Q8NHV4 RNA5SP224-201ENST00000365069 126 ntBASIC0.23□□□□□ -2.37
NEDD1Q8NHV4 MIR1295A-201ENST00000408463 79 ntBASIC0.2□□□□□ -2.38
NEDD1Q8NHV4 MIR6718-201ENST00000616153 80 ntBASIC0.2□□□□□ -2.38
NEDD1Q8NHV4 RNU6-1169P-201ENST00000363537 103 ntBASIC0.19□□□□□ -2.38
NEDD1Q8NHV4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.19□□□□□ -2.38
NEDD1Q8NHV4 MIR379-201ENST00000362218 67 ntBASIC0.18□□□□□ -2.38
NEDD1Q8NHV4 SNORD114-11-201ENST00000363738 75 ntBASIC0.18□□□□□ -2.38
NEDD1Q8NHV4 Y_RNA.260-201ENST00000364628 101 ntBASIC0.18□□□□□ -2.38
NEDD1Q8NHV4 MIR4290-201ENST00000583807 95 ntBASIC0.18□□□□□ -2.38
NEDD1Q8NHV4 SNORD18C-201ENST00000362704 69 ntBASIC0.17□□□□□ -2.38
NEDD1Q8NHV4 MIR6759-201ENST00000638110 65 ntBASIC0.17□□□□□ -2.38
NEDD1Q8NHV4 RNU6-912P-201ENST00000363800 104 ntBASIC0.16□□□□□ -2.38
NEDD1Q8NHV4 MIR204-201ENST00000385200 110 ntBASIC0.16□□□□□ -2.38
NEDD1Q8NHV4 SNORA13-201ENST00000458790 133 ntBASIC0.16□□□□□ -2.38
NEDD1Q8NHV4 SNORA32.1-201ENST00000364514 115 ntBASIC0.15□□□□□ -2.39
NEDD1Q8NHV4 SNORD114-12-201ENST00000365400 75 ntBASIC0.15□□□□□ -2.39
NEDD1Q8NHV4 MIR5190-201ENST00000581537 80 ntBASIC0.15□□□□□ -2.39
NEDD1Q8NHV4 MIR4636-201ENST00000582271 80 ntBASIC0.15□□□□□ -2.39
NEDD1Q8NHV4 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
NEDD1Q8NHV4 FTX_4.1-201ENST00000616291 147 ntBASIC0.14□□□□□ -2.39
NEDD1Q8NHV4 Y_RNA.781-201ENST00000620301 103 ntBASIC0.14□□□□□ -2.39
NEDD1Q8NHV4 MIR371B-201ENST00000638082 66 ntBASIC0.14□□□□□ -2.39
NEDD1Q8NHV4 Y_RNA.185-201ENST00000363894 100 ntBASIC0.12□□□□□ -2.39
NEDD1Q8NHV4 MIR548T-201ENST00000408369 74 ntBASIC0.12□□□□□ -2.39
NEDD1Q8NHV4 MIR5589-201ENST00000579442 60 ntBASIC0.12□□□□□ -2.39
NEDD1Q8NHV4 MIR4263-201ENST00000584745 83 ntBASIC0.12□□□□□ -2.39
NEDD1Q8NHV4 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.11□□□□□ -2.39
NEDD1Q8NHV4 SNORA18.1-201ENST00000363418 128 ntBASIC0.1□□□□□ -2.39
NEDD1Q8NHV4 AC104692.1-201ENST00000472406 90 ntBASIC0.1□□□□□ -2.39
NEDD1Q8NHV4 MIR3666-201ENST00000607845 111 ntBASIC0.1□□□□□ -2.39
NEDD1Q8NHV4 MIR4788-201ENST00000639104 80 ntBASIC0.1□□□□□ -2.39
NEDD1Q8NHV4 SNORD45C-201ENST00000383893 79 ntBASIC0.09□□□□□ -2.4
NEDD1Q8NHV4 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.09□□□□□ -2.4
NEDD1Q8NHV4 RNU6-431P-201ENST00000383874 107 ntBASIC0.07□□□□□ -2.4
NEDD1Q8NHV4 Y_RNA.406-201ENST00000383984 100 ntBASIC0.07□□□□□ -2.4
NEDD1Q8NHV4 MIR4802-201ENST00000581881 80 ntBASIC0.07□□□□□ -2.4
NEDD1Q8NHV4 RNA5SP300-201ENST00000391197 107 ntBASIC0.06□□□□□ -2.4
NEDD1Q8NHV4 MIR147A-201ENST00000385079 72 ntBASIC0.05□□□□□ -2.4
NEDD1Q8NHV4 RNU6-79P-201ENST00000362511 107 ntBASIC0.04□□□□□ -2.4
NEDD1Q8NHV4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
NEDD1Q8NHV4 Z95118.1-201ENST00000421372 247 ntBASIC0.04□□□□□ -2.4
NEDD1Q8NHV4 SNORD4A-201ENST00000459174 72 ntBASIC0.03□□□□□ -2.4
NEDD1Q8NHV4 MIR6818-201ENST00000621576 65 ntBASIC0.03□□□□□ -2.4
NEDD1Q8NHV4 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
NEDD1Q8NHV4 AC018880.2-201ENST00000414265 201 ntBASIC0.02□□□□□ -2.41
NEDD1Q8NHV4 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
NEDD1Q8NHV4 Y_RNA.335-201ENST00000365299 96 ntBASIC0.01□□□□□ -2.41
NEDD1Q8NHV4 snoU13.19-201ENST00000459148 104 ntBASIC0.01□□□□□ -2.41
NEDD1Q8NHV4 SNORD114-31-201ENST00000363219 75 ntBASIC0□□□□□ -2.41
NEDD1Q8NHV4 SNORD64-201ENST00000386683 67 ntBASIC0□□□□□ -2.41
NEDD1Q8NHV4 RNU6-30P-201ENST00000384561 107 ntBASIC-0.01□□□□□ -2.41
NEDD1Q8NHV4 IGLVI-20-201ENST00000519296 130 ntBASIC-0.01□□□□□ -2.41
NEDD1Q8NHV4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.02□□□□□ -2.41
NEDD1Q8NHV4 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.03□□□□□ -2.41
NEDD1Q8NHV4 MIR1295B-201ENST00000636144 60 ntBASIC-0.03□□□□□ -2.41
NEDD1Q8NHV4 RNU7-134P-201ENST00000458997 64 ntBASIC-0.04□□□□□ -2.42
NEDD1Q8NHV4 RNU6-164P-201ENST00000364604 103 ntBASIC-0.05□□□□□ -2.42
NEDD1Q8NHV4 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
NEDD1Q8NHV4 AC021146.6-201ENST00000514659 117 ntBASIC-0.05□□□□□ -2.42
NEDD1Q8NHV4 RNA5SP368-201ENST00000364298 116 ntBASIC-0.06□□□□□ -2.42
NEDD1Q8NHV4 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.06□□□□□ -2.42
NEDD1Q8NHV4 MIR656-201ENST00000385224 78 ntBASIC-0.06□□□□□ -2.42
NEDD1Q8NHV4 AL500527.2-201ENST00000454105 95 ntBASIC-0.06□□□□□ -2.42
NEDD1Q8NHV4 MIR1254-1-201ENST00000408257 97 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 341.2 ms