Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.33□□□□□ -2.46
SLC44A3Q8N4M1 RNU6-419P-201ENST00000517030 63 ntBASIC-0.33□□□□□ -2.46
SLC44A3Q8N4M1 MIR548X-201ENST00000580069 75 ntBASIC-0.33□□□□□ -2.46
SLC44A3Q8N4M1 MIR548AX-201ENST00000580117 73 ntBASIC-0.33□□□□□ -2.46
SLC44A3Q8N4M1 SNORD114-17-201ENST00000364699 75 ntBASIC-0.34□□□□□ -2.46
SLC44A3Q8N4M1 RNU6-828P-201ENST00000364876 107 ntBASIC-0.34□□□□□ -2.46
SLC44A3Q8N4M1 SNORD14C-201ENST00000365382 88 ntBASIC-0.34□□□□□ -2.46
SLC44A3Q8N4M1 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.34□□□□□ -2.46
SLC44A3Q8N4M1 SNX3P1X-201ENST00000414887 175 ntBASIC-0.34□□□□□ -2.46
SLC44A3Q8N4M1 AL353691.2-201ENST00000443795 59 ntBASIC-0.34□□□□□ -2.46
SLC44A3Q8N4M1 RNU6-320P-201ENST00000516511 106 ntBASIC-0.34□□□□□ -2.46
SLC44A3Q8N4M1 RNU4-37P-201ENST00000410214 84 ntBASIC-0.35□□□□□ -2.47
SLC44A3Q8N4M1 SNORD126-201ENST00000459475 77 ntBASIC-0.35□□□□□ -2.47
SLC44A3Q8N4M1 RNA5SP275-201ENST00000363936 118 ntBASIC-0.36□□□□□ -2.47
SLC44A3Q8N4M1 RNU6-936P-201ENST00000384005 107 ntBASIC-0.36□□□□□ -2.47
SLC44A3Q8N4M1 RNU6-974P-201ENST00000384099 108 ntBASIC-0.36□□□□□ -2.47
SLC44A3Q8N4M1 RNU6-258P-201ENST00000390884 101 ntBASIC-0.36□□□□□ -2.47
SLC44A3Q8N4M1 MIR548Q-201ENST00000408404 100 ntBASIC-0.36□□□□□ -2.47
SLC44A3Q8N4M1 MIR4723-201ENST00000585070 81 ntBASIC-0.36□□□□□ -2.47
SLC44A3Q8N4M1 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.37□□□□□ -2.47
SLC44A3Q8N4M1 MIR5683-201ENST00000636514 76 ntBASIC-0.37□□□□□ -2.47
SLC44A3Q8N4M1 SNORD114-14-201ENST00000362723 75 ntBASIC-0.38□□□□□ -2.47
SLC44A3Q8N4M1 SNORA32.3-201ENST00000384772 121 ntBASIC-0.38□□□□□ -2.47
SLC44A3Q8N4M1 AC021146.6-201ENST00000514659 117 ntBASIC-0.38□□□□□ -2.47
SLC44A3Q8N4M1 Y_RNA.722-201ENST00000517279 114 ntBASIC-0.38□□□□□ -2.47
SLC44A3Q8N4M1 MIR196A2-201ENST00000385189 110 ntBASIC-0.39□□□□□ -2.47
SLC44A3Q8N4M1 RNU4-63P-201ENST00000411313 118 ntBASIC-0.39□□□□□ -2.47
SLC44A3Q8N4M1 SNORD63.2-201ENST00000516303 64 ntBASIC-0.39□□□□□ -2.47
SLC44A3Q8N4M1 RNU6-141P-201ENST00000410499 105 ntBASIC-0.4□□□□□ -2.47
SLC44A3Q8N4M1 RNU6-284P-201ENST00000411105 106 ntBASIC-0.4□□□□□ -2.47
SLC44A3Q8N4M1 RNU6-247P-201ENST00000362636 107 ntBASIC-0.41□□□□□ -2.48
SLC44A3Q8N4M1 RNU4-33P-201ENST00000364316 85 ntBASIC-0.41□□□□□ -2.48
SLC44A3Q8N4M1 RNU6-608P-201ENST00000383927 104 ntBASIC-0.41□□□□□ -2.48
SLC44A3Q8N4M1 AL451105.1-201ENST00000450005 189 ntBASIC-0.41□□□□□ -2.48
SLC44A3Q8N4M1 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.42□□□□□ -2.48
SLC44A3Q8N4M1 SNORA3B-201ENST00000391305 131 ntBASIC-0.42□□□□□ -2.48
SLC44A3Q8N4M1 RNU6-808P-201ENST00000391233 108 ntBASIC-0.43□□□□□ -2.48
SLC44A3Q8N4M1 MIR4436A-201ENST00000585278 85 ntBASIC-0.43□□□□□ -2.48
SLC44A3Q8N4M1 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.44□□□□□ -2.48
SLC44A3Q8N4M1 MIR548AZ-201ENST00000616567 95 ntBASIC-0.44□□□□□ -2.48
SLC44A3Q8N4M1 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.45□□□□□ -2.48
SLC44A3Q8N4M1 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.46□□□□□ -2.48
SLC44A3Q8N4M1 MIR147A-201ENST00000385079 72 ntBASIC-0.46□□□□□ -2.48
SLC44A3Q8N4M1 SNORA27.2-201ENST00000363365 126 ntBASIC-0.48□□□□□ -2.49
SLC44A3Q8N4M1 RNU6-431P-201ENST00000383874 107 ntBASIC-0.48□□□□□ -2.49
SLC44A3Q8N4M1 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.48□□□□□ -2.49
SLC44A3Q8N4M1 MIR29B1-201ENST00000385015 81 ntBASIC-0.5□□□□□ -2.49
SLC44A3Q8N4M1 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
SLC44A3Q8N4M1 RNU6-753P-201ENST00000363926 107 ntBASIC-0.51□□□□□ -2.49
SLC44A3Q8N4M1 MIR507-201ENST00000385234 94 ntBASIC-0.51□□□□□ -2.49
SLC44A3Q8N4M1 RNA5SP26-201ENST00000362406 119 ntBASIC-0.52□□□□□ -2.49
SLC44A3Q8N4M1 MT-TQ-201ENST00000387372 72 ntBASIC-0.52□□□□□ -2.49
SLC44A3Q8N4M1 SNORD64-201ENST00000386683 67 ntBASIC-0.53□□□□□ -2.49
SLC44A3Q8N4M1 RPL35AP4-201ENST00000412007 102 ntBASIC-0.53□□□□□ -2.49
SLC44A3Q8N4M1 SNORD45.2-201ENST00000363552 72 ntBASIC-0.54□□□□□ -2.5
SLC44A3Q8N4M1 MIR3681-201ENST00000580089 72 ntBASIC-0.54□□□□□ -2.5
SLC44A3Q8N4M1 RNU4-88P-201ENST00000411220 86 ntBASIC-0.55□□□□□ -2.5
SLC44A3Q8N4M1 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.57□□□□□ -2.5
SLC44A3Q8N4M1 RNU6-530P-201ENST00000391180 107 ntBASIC-0.57□□□□□ -2.5
SLC44A3Q8N4M1 AC090616.4-201ENST00000448026 115 ntBASIC-0.57□□□□□ -2.5
SLC44A3Q8N4M1 RNU6-838P-201ENST00000363399 108 ntBASIC-0.58□□□□□ -2.5
SLC44A3Q8N4M1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.58□□□□□ -2.5
SLC44A3Q8N4M1 MIR382-201ENST00000637119 76 ntBASIC-0.58□□□□□ -2.5
SLC44A3Q8N4M1 MIR601-201ENST00000385256 79 ntBASIC-0.59□□□□□ -2.5
SLC44A3Q8N4M1 MIR548F3-201ENST00000408509 87 ntBASIC-0.6□□□□□ -2.51
SLC44A3Q8N4M1 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.6□□□□□ -2.51
SLC44A3Q8N4M1 RNY3P8-201ENST00000411366 126 ntBASIC-0.6□□□□□ -2.51
SLC44A3Q8N4M1 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.61□□□□□ -2.51
SLC44A3Q8N4M1 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.61□□□□□ -2.51
SLC44A3Q8N4M1 MIR6818-201ENST00000621576 65 ntBASIC-0.61□□□□□ -2.51
SLC44A3Q8N4M1 RNU6-742P-201ENST00000365289 107 ntBASIC-0.62□□□□□ -2.51
SLC44A3Q8N4M1 MIR587-201ENST00000384845 96 ntBASIC-0.62□□□□□ -2.51
SLC44A3Q8N4M1 RNU6-930P-201ENST00000390938 100 ntBASIC-0.62□□□□□ -2.51
SLC44A3Q8N4M1 MIR548AL-201ENST00000578416 97 ntBASIC-0.62□□□□□ -2.51
SLC44A3Q8N4M1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.62□□□□□ -2.51
SLC44A3Q8N4M1 MIR198-201ENST00000637333 62 ntBASIC-0.62□□□□□ -2.51
SLC44A3Q8N4M1 SNORD114-25-201ENST00000363742 72 ntBASIC-0.63□□□□□ -2.51
SLC44A3Q8N4M1 RNU6-361P-201ENST00000364454 107 ntBASIC-0.63□□□□□ -2.51
SLC44A3Q8N4M1 MIR23C-201ENST00000579846 100 ntBASIC-0.64□□□□□ -2.51
SLC44A3Q8N4M1 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.64□□□□□ -2.51
SLC44A3Q8N4M1 U4.2-201ENST00000618561 85 ntBASIC-0.64□□□□□ -2.51
SLC44A3Q8N4M1 MIR4320-201ENST00000636981 65 ntBASIC-0.64□□□□□ -2.51
SLC44A3Q8N4M1 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.66□□□□□ -2.52
SLC44A3Q8N4M1 MIR202-201ENST00000362219 110 ntBASIC-0.67□□□□□ -2.52
SLC44A3Q8N4M1 AL500527.2-201ENST00000454105 95 ntBASIC-0.67□□□□□ -2.52
SLC44A3Q8N4M1 MIR4426-201ENST00000640330 63 ntBASIC-0.67□□□□□ -2.52
SLC44A3Q8N4M1 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.68□□□□□ -2.52
SLC44A3Q8N4M1 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.69□□□□□ -2.52
SLC44A3Q8N4M1 snoU83B.1-201ENST00000517136 88 ntBASIC-0.69□□□□□ -2.52
SLC44A3Q8N4M1 RNU7-134P-201ENST00000458997 64 ntBASIC-0.7□□□□□ -2.52
SLC44A3Q8N4M1 RNU6-563P-201ENST00000364872 108 ntBASIC-0.71□□□□□ -2.52
SLC44A3Q8N4M1 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.71□□□□□ -2.52
SLC44A3Q8N4M1 SNORA17.4-201ENST00000391287 132 ntBASIC-0.71□□□□□ -2.52
SLC44A3Q8N4M1 MIR548H4-201ENST00000408689 111 ntBASIC-0.71□□□□□ -2.52
SLC44A3Q8N4M1 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.71□□□□□ -2.52
SLC44A3Q8N4M1 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.71□□□□□ -2.52
SLC44A3Q8N4M1 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.71□□□□□ -2.52
SLC44A3Q8N4M1 AC013734.1-201ENST00000619329 111 ntBASIC-0.71□□□□□ -2.52
SLC44A3Q8N4M1 MIR1207-201ENST00000408249 87 ntBASIC-0.72□□□□□ -2.52
SLC44A3Q8N4M1 SCARNA17-201ENST00000516183 144 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms