Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 MIR330-201ENST00000362196 94 ntBASIC0.66□□□□□ -2.3
NFX1Q12986 RNA5SP62-201ENST00000363457 110 ntBASIC0.66□□□□□ -2.3
NFX1Q12986 Y_RNA.433-201ENST00000384089 102 ntBASIC0.66□□□□□ -2.3
NFX1Q12986 SNORD75.1-201ENST00000408373 60 ntBASIC0.66□□□□□ -2.3
NFX1Q12986 MIR4711-201ENST00000578274 70 ntBASIC0.65□□□□□ -2.31
NFX1Q12986 RNU6-1340P-201ENST00000384438 107 ntBASIC0.64□□□□□ -2.31
NFX1Q12986 RNA5SP193-201ENST00000410353 107 ntBASIC0.64□□□□□ -2.31
NFX1Q12986 RNU6-345P-201ENST00000517001 107 ntBASIC0.64□□□□□ -2.31
NFX1Q12986 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
NFX1Q12986 AC069113.3-201ENST00000521019 150 ntBASIC0.62□□□□□ -2.31
NFX1Q12986 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
NFX1Q12986 MIR1254-1-201ENST00000408257 97 ntBASIC0.61□□□□□ -2.31
NFX1Q12986 AP000533.3-201ENST00000447704 118 ntBASIC0.61□□□□□ -2.31
NFX1Q12986 MIRLET7D-201ENST00000362263 87 ntBASIC0.6□□□□□ -2.31
NFX1Q12986 RNA5SP26-201ENST00000362406 119 ntBASIC0.6□□□□□ -2.31
NFX1Q12986 SNORA32.1-201ENST00000364514 115 ntBASIC0.6□□□□□ -2.31
NFX1Q12986 RNU6-1024P-201ENST00000384199 107 ntBASIC0.59□□□□□ -2.31
NFX1Q12986 RNU7-165P-201ENST00000458864 60 ntBASIC0.59□□□□□ -2.31
NFX1Q12986 Y_RNA.189-201ENST00000363959 112 ntBASIC0.58□□□□□ -2.32
NFX1Q12986 RNU6-1324P-201ENST00000384222 107 ntBASIC0.58□□□□□ -2.32
NFX1Q12986 MIR593-201ENST00000384856 100 ntBASIC0.58□□□□□ -2.32
NFX1Q12986 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
NFX1Q12986 SNORA62.5-201ENST00000516634 120 ntBASIC0.58□□□□□ -2.32
NFX1Q12986 MIR4645-201ENST00000583158 77 ntBASIC0.58□□□□□ -2.32
NFX1Q12986 RNA5SP66-201ENST00000517178 101 ntBASIC0.57□□□□□ -2.32
NFX1Q12986 MIR3179-1-201ENST00000578940 84 ntBASIC0.57□□□□□ -2.32
NFX1Q12986 MIR3179-2-201ENST00000579107 84 ntBASIC0.57□□□□□ -2.32
NFX1Q12986 MIR3179-3-201ENST00000579566 84 ntBASIC0.57□□□□□ -2.32
NFX1Q12986 MIR3179-4-201ENST00000617599 84 ntBASIC0.57□□□□□ -2.32
NFX1Q12986 Y_RNA.434-201ENST00000384090 100 ntBASIC0.56□□□□□ -2.32
NFX1Q12986 MIR610-201ENST00000385139 96 ntBASIC0.56□□□□□ -2.32
NFX1Q12986 RNU7-159P-201ENST00000459284 62 ntBASIC0.56□□□□□ -2.32
NFX1Q12986 MIR4743-201ENST00000584576 69 ntBASIC0.56□□□□□ -2.32
NFX1Q12986 AC093726.3-201ENST00000637588 150 ntBASIC0.56□□□□□ -2.32
NFX1Q12986 AC018880.2-201ENST00000414265 201 ntBASIC0.55□□□□□ -2.32
NFX1Q12986 AC114737.2-201ENST00000421583 173 ntBASIC0.55□□□□□ -2.32
NFX1Q12986 SNORD49B-201ENST00000365172 72 ntBASIC0.54□□□□□ -2.32
NFX1Q12986 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
NFX1Q12986 SNORA13-201ENST00000458790 133 ntBASIC0.53□□□□□ -2.32
NFX1Q12986 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.53□□□□□ -2.32
NFX1Q12986 AL500527.2-201ENST00000454105 95 ntBASIC0.52□□□□□ -2.33
NFX1Q12986 VTRNA1-3-201ENST00000365645 89 ntBASIC0.51□□□□□ -2.33
NFX1Q12986 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
NFX1Q12986 MIR145-201ENST00000384967 88 ntBASIC0.51□□□□□ -2.33
NFX1Q12986 RNU6-46P-201ENST00000383860 107 ntBASIC0.5□□□□□ -2.33
NFX1Q12986 AL590491.3-201ENST00000610731 82 ntBASIC0.5□□□□□ -2.33
NFX1Q12986 RNU6-79P-201ENST00000362511 107 ntBASIC0.49□□□□□ -2.33
NFX1Q12986 MIR204-201ENST00000385200 110 ntBASIC0.49□□□□□ -2.33
NFX1Q12986 RNA5SP476-201ENST00000516613 103 ntBASIC0.49□□□□□ -2.33
NFX1Q12986 MIR2909-201ENST00000617113 69 ntBASIC0.49□□□□□ -2.33
NFX1Q12986 MIR4315-1-201ENST00000636800 73 ntBASIC0.48□□□□□ -2.33
NFX1Q12986 MIR4315-2-201ENST00000640925 73 ntBASIC0.48□□□□□ -2.33
NFX1Q12986 RNU6-1043P-201ENST00000410355 99 ntBASIC0.47□□□□□ -2.33
NFX1Q12986 SNORD19B.1-201ENST00000630615 80 ntBASIC0.47□□□□□ -2.33
NFX1Q12986 RNU6-1327P-201ENST00000365302 105 ntBASIC0.46□□□□□ -2.34
NFX1Q12986 MIR4514-201ENST00000581410 57 ntBASIC0.45□□□□□ -2.34
NFX1Q12986 Y_RNA.349-201ENST00000365406 102 ntBASIC0.44□□□□□ -2.34
NFX1Q12986 RNA5SP63-201ENST00000391225 112 ntBASIC0.44□□□□□ -2.34
NFX1Q12986 MIR548H1-201ENST00000408610 102 ntBASIC0.44□□□□□ -2.34
NFX1Q12986 Z95118.1-201ENST00000421372 247 ntBASIC0.43□□□□□ -2.34
NFX1Q12986 RNU6-422P-201ENST00000384632 107 ntBASIC0.42□□□□□ -2.34
NFX1Q12986 MIR4263-201ENST00000584745 83 ntBASIC0.41□□□□□ -2.34
NFX1Q12986 AC023932.2-201ENST00000603176 175 ntBASIC0.41□□□□□ -2.34
NFX1Q12986 RNA5SP214-201ENST00000363378 118 ntBASIC0.4□□□□□ -2.35
NFX1Q12986 HAR1A.1-201ENST00000459583 118 ntBASIC0.4□□□□□ -2.35
NFX1Q12986 RNA5SP134-201ENST00000516492 96 ntBASIC0.4□□□□□ -2.35
NFX1Q12986 RNA5SP285-201ENST00000516619 119 ntBASIC0.4□□□□□ -2.35
NFX1Q12986 Y_RNA.59-201ENST00000362828 102 ntBASIC0.39□□□□□ -2.35
NFX1Q12986 SNORD114-5-201ENST00000362928 70 ntBASIC0.38□□□□□ -2.35
NFX1Q12986 RNU6-1034P-201ENST00000365335 101 ntBASIC0.38□□□□□ -2.35
NFX1Q12986 MIR6818-201ENST00000621576 65 ntBASIC0.38□□□□□ -2.35
NFX1Q12986 RNU6-854P-201ENST00000364036 107 ntBASIC0.37□□□□□ -2.35
NFX1Q12986 RNU6-164P-201ENST00000364604 103 ntBASIC0.37□□□□□ -2.35
NFX1Q12986 SNORD113-3-201ENST00000364830 72 ntBASIC0.36□□□□□ -2.35
NFX1Q12986 SNORD114-9-201ENST00000364370 72 ntBASIC0.34□□□□□ -2.36
NFX1Q12986 RNU6-627P-201ENST00000364032 102 ntBASIC0.33□□□□□ -2.36
NFX1Q12986 AC104692.1-201ENST00000472406 90 ntBASIC0.33□□□□□ -2.36
NFX1Q12986 MIR6086-201ENST00000638065 55 ntBASIC0.33□□□□□ -2.36
NFX1Q12986 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.32□□□□□ -2.36
NFX1Q12986 MIR147A-201ENST00000385079 72 ntBASIC0.31□□□□□ -2.36
NFX1Q12986 SNORD114-11-201ENST00000363738 75 ntBASIC0.29□□□□□ -2.36
NFX1Q12986 SNORD114-12-201ENST00000365400 75 ntBASIC0.29□□□□□ -2.36
NFX1Q12986 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.29□□□□□ -2.36
NFX1Q12986 RNU6-431P-201ENST00000383874 107 ntBASIC0.28□□□□□ -2.36
NFX1Q12986 Y_RNA.484-201ENST00000384389 103 ntBASIC0.28□□□□□ -2.36
NFX1Q12986 snoU13.10-201ENST00000459301 103 ntBASIC0.28□□□□□ -2.36
NFX1Q12986 AC021146.6-201ENST00000514659 117 ntBASIC0.28□□□□□ -2.36
NFX1Q12986 MIR3666-201ENST00000607845 111 ntBASIC0.28□□□□□ -2.36
NFX1Q12986 MIR4788-201ENST00000639104 80 ntBASIC0.28□□□□□ -2.36
NFX1Q12986 Y_RNA.63-201ENST00000362841 102 ntBASIC0.27□□□□□ -2.37
NFX1Q12986 Y_RNA.449-201ENST00000384187 102 ntBASIC0.27□□□□□ -2.37
NFX1Q12986 RNU6-983P-201ENST00000516004 103 ntBASIC0.27□□□□□ -2.37
NFX1Q12986 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC0.27□□□□□ -2.37
NFX1Q12986 MIR6718-201ENST00000616153 80 ntBASIC0.27□□□□□ -2.37
NFX1Q12986 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.27□□□□□ -2.37
NFX1Q12986 SNORA18.1-201ENST00000363418 128 ntBASIC0.26□□□□□ -2.37
NFX1Q12986 MIR548W-201ENST00000581970 74 ntBASIC0.26□□□□□ -2.37
NFX1Q12986 MIR6759-201ENST00000638110 65 ntBASIC0.26□□□□□ -2.37
NFX1Q12986 SNORD64-201ENST00000386683 67 ntBASIC0.24□□□□□ -2.37
NFX1Q12986 MIR4636-201ENST00000582271 80 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms