Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SNORD83B-201ENST00000386745 93 ntBASIC-0.73□□□□□ -2.53
GFRA1P56159 MIR4490-201ENST00000582647 84 ntBASIC-0.73□□□□□ -2.53
GFRA1P56159 MIR4499-201ENST00000584834 69 ntBASIC-0.73□□□□□ -2.53
GFRA1P56159 uc_338.19-201ENST00000616808 99 ntBASIC-0.73□□□□□ -2.53
GFRA1P56159 RNU6-247P-201ENST00000362636 107 ntBASIC-0.74□□□□□ -2.53
GFRA1P56159 snoU13.19-201ENST00000459148 104 ntBASIC-0.74□□□□□ -2.53
GFRA1P56159 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.74□□□□□ -2.53
GFRA1P56159 AC079150.2-201ENST00000443733 78 ntBASIC-0.75□□□□□ -2.53
GFRA1P56159 MIR3170-201ENST00000582699 77 ntBASIC-0.75□□□□□ -2.53
GFRA1P56159 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.76□□□□□ -2.53
GFRA1P56159 RNU7-134P-201ENST00000458997 64 ntBASIC-0.76□□□□□ -2.53
GFRA1P56159 RNU6-446P-201ENST00000362827 106 ntBASIC-0.77□□□□□ -2.53
GFRA1P56159 RNU6-829P-201ENST00000363700 112 ntBASIC-0.77□□□□□ -2.53
GFRA1P56159 MIR125B1-201ENST00000385236 88 ntBASIC-0.78□□□□□ -2.53
GFRA1P56159 AP002795.1-201ENST00000534879 84 ntBASIC-0.78□□□□□ -2.53
GFRA1P56159 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.79□□□□□ -2.54
GFRA1P56159 RNU6-30P-201ENST00000384561 107 ntBASIC-0.79□□□□□ -2.54
GFRA1P56159 RNU6-828P-201ENST00000364876 107 ntBASIC-0.8□□□□□ -2.54
GFRA1P56159 MT-TQ-201ENST00000387372 72 ntBASIC-0.8□□□□□ -2.54
GFRA1P56159 snoU83B.1-201ENST00000517136 88 ntBASIC-0.81□□□□□ -2.54
GFRA1P56159 RNU4-63P-201ENST00000411313 118 ntBASIC-0.82□□□□□ -2.54
GFRA1P56159 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.82□□□□□ -2.54
GFRA1P56159 MIR507-201ENST00000385234 94 ntBASIC-0.83□□□□□ -2.54
GFRA1P56159 SNORD63.2-201ENST00000516303 64 ntBASIC-0.83□□□□□ -2.54
GFRA1P56159 MIR378F-201ENST00000578143 78 ntBASIC-0.83□□□□□ -2.54
GFRA1P56159 SCARNA17-201ENST00000516183 144 ntBASIC-0.84□□□□□ -2.54
GFRA1P56159 RNA5SP26-201ENST00000362406 119 ntBASIC-0.85□□□□□ -2.55
GFRA1P56159 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.85□□□□□ -2.55
GFRA1P56159 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.85□□□□□ -2.55
GFRA1P56159 MIR520D-201ENST00000385002 87 ntBASIC-0.86□□□□□ -2.55
GFRA1P56159 MIR8485-201ENST00000401372 91 ntBASIC-0.86□□□□□ -2.55
GFRA1P56159 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.86□□□□□ -2.55
GFRA1P56159 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.86□□□□□ -2.55
GFRA1P56159 MIR6818-201ENST00000621576 65 ntBASIC-0.86□□□□□ -2.55
GFRA1P56159 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.87□□□□□ -2.55
GFRA1P56159 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.87□□□□□ -2.55
GFRA1P56159 RPL35AP4-201ENST00000412007 102 ntBASIC-0.87□□□□□ -2.55
GFRA1P56159 MIR548AX-201ENST00000580117 73 ntBASIC-0.87□□□□□ -2.55
GFRA1P56159 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.87□□□□□ -2.55
GFRA1P56159 RNY1P9-201ENST00000532431 109 ntBASIC-0.88□□□□□ -2.55
GFRA1P56159 MIR29B1-201ENST00000385015 81 ntBASIC-0.91□□□□□ -2.56
GFRA1P56159 SNORD113-4-201ENST00000364802 75 ntBASIC-0.92□□□□□ -2.56
GFRA1P56159 MIR6874-201ENST00000635894 71 ntBASIC-0.92□□□□□ -2.56
GFRA1P56159 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.93□□□□□ -2.56
GFRA1P56159 RNU6-608P-201ENST00000383927 104 ntBASIC-0.93□□□□□ -2.56
GFRA1P56159 AC091912.2-201ENST00000624798 167 ntBASIC-0.93□□□□□ -2.56
GFRA1P56159 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.93□□□□□ -2.56
GFRA1P56159 SNORA27.2-201ENST00000363365 126 ntBASIC-0.94□□□□□ -2.56
GFRA1P56159 AC090616.4-201ENST00000448026 115 ntBASIC-0.94□□□□□ -2.56
GFRA1P56159 RNU6-419P-201ENST00000517030 63 ntBASIC-0.94□□□□□ -2.56
GFRA1P56159 SNORD45.2-201ENST00000363552 72 ntBASIC-0.95□□□□□ -2.56
GFRA1P56159 RNU6-614P-201ENST00000384369 107 ntBASIC-0.95□□□□□ -2.56
GFRA1P56159 RNA5SP67-201ENST00000516422 131 ntBASIC-0.95□□□□□ -2.56
GFRA1P56159 U6.59-201ENST00000615686 107 ntBASIC-0.95□□□□□ -2.56
GFRA1P56159 MIR1468-201ENST00000410600 86 ntBASIC-0.96□□□□□ -2.56
GFRA1P56159 MIR4306-201ENST00000583390 91 ntBASIC-0.96□□□□□ -2.56
GFRA1P56159 RNU6-576P-201ENST00000390854 102 ntBASIC-0.97□□□□□ -2.56
GFRA1P56159 RNU6-258P-201ENST00000390884 101 ntBASIC-0.97□□□□□ -2.56
GFRA1P56159 MIR548X-201ENST00000580069 75 ntBASIC-0.97□□□□□ -2.56
GFRA1P56159 MIR4324-201ENST00000584846 72 ntBASIC-0.97□□□□□ -2.56
GFRA1P56159 RNU6-974P-201ENST00000384099 108 ntBASIC-0.98□□□□□ -2.57
GFRA1P56159 AL451105.1-201ENST00000450005 189 ntBASIC-0.98□□□□□ -2.57
GFRA1P56159 RNU6-164P-201ENST00000364604 103 ntBASIC-0.99□□□□□ -2.57
GFRA1P56159 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.99□□□□□ -2.57
GFRA1P56159 MTND4LP19-201ENST00000403051 166 ntBASIC-1□□□□□ -2.57
GFRA1P56159 MIR23C-201ENST00000579846 100 ntBASIC-1□□□□□ -2.57
GFRA1P56159 MIR4520-1-201ENST00000582609 70 ntBASIC-1.02□□□□□ -2.57
GFRA1P56159 MIR6738-201ENST00000619620 64 ntBASIC-1.02□□□□□ -2.57
GFRA1P56159 MIR409-201ENST00000362237 79 ntBASIC-1.03□□□□□ -2.57
GFRA1P56159 MIR6502-201ENST00000617296 76 ntBASIC-1.04□□□□□ -2.58
GFRA1P56159 RNU6-706P-201ENST00000517229 104 ntBASIC-1.06□□□□□ -2.58
GFRA1P56159 MIR3115-201ENST00000577915 68 ntBASIC-1.07□□□□□ -2.58
GFRA1P56159 RNU6-563P-201ENST00000364872 108 ntBASIC-1.08□□□□□ -2.58
GFRA1P56159 AC018880.2-201ENST00000414265 201 ntBASIC-1.08□□□□□ -2.58
GFRA1P56159 RNU6-79P-201ENST00000362511 107 ntBASIC-1.1□□□□□ -2.59
GFRA1P56159 RNU4-33P-201ENST00000364316 85 ntBASIC-1.1□□□□□ -2.59
GFRA1P56159 MIR5591-201ENST00000578248 65 ntBASIC-1.1□□□□□ -2.59
GFRA1P56159 RNU6-10P-201ENST00000384036 107 ntBASIC-1.11□□□□□ -2.59
GFRA1P56159 HLA-S-202ENST00000425174 53 ntBASIC-1.11□□□□□ -2.59
GFRA1P56159 RNU6-936P-201ENST00000384005 107 ntBASIC-1.12□□□□□ -2.59
GFRA1P56159 RNU6-530P-201ENST00000391180 107 ntBASIC-1.12□□□□□ -2.59
GFRA1P56159 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.12□□□□□ -2.59
GFRA1P56159 MIR3165-201ENST00000579874 75 ntBASIC-1.12□□□□□ -2.59
GFRA1P56159 AC138207.3-201ENST00000585289 166 ntBASIC-1.12□□□□□ -2.59
GFRA1P56159 AL627230.5-201ENST00000619807 58 ntBASIC-1.12□□□□□ -2.59
GFRA1P56159 RNU6-226P-201ENST00000363778 107 ntBASIC-1.13□□□□□ -2.59
GFRA1P56159 RNA5SP266-201ENST00000410273 108 ntBASIC-1.13□□□□□ -2.59
GFRA1P56159 RNU6-980P-201ENST00000516925 103 ntBASIC-1.13□□□□□ -2.59
GFRA1P56159 AC120024.2-201ENST00000576526 175 ntBASIC-1.13□□□□□ -2.59
GFRA1P56159 MIR487B-201ENST00000385021 84 ntBASIC-1.15□□□□□ -2.59
GFRA1P56159 RNU6-808P-201ENST00000391233 108 ntBASIC-1.15□□□□□ -2.59
GFRA1P56159 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.15□□□□□ -2.59
GFRA1P56159 RNA5SP86-201ENST00000390869 98 ntBASIC-1.16□□□□□ -2.6
GFRA1P56159 RNU6-400P-201ENST00000391173 106 ntBASIC-1.16□□□□□ -2.6
GFRA1P56159 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.16□□□□□ -2.6
GFRA1P56159 AC013734.1-201ENST00000619329 111 ntBASIC-1.16□□□□□ -2.6
GFRA1P56159 RNA5SP331-201ENST00000364986 107 ntBASIC-1.18□□□□□ -2.6
GFRA1P56159 RNY3P8-201ENST00000411366 126 ntBASIC-1.18□□□□□ -2.6
GFRA1P56159 MIR4770-201ENST00000579149 58 ntBASIC-1.18□□□□□ -2.6
GFRA1P56159 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms