Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.86□□□□□ -2.71
COL6A3P12111 MIR548X-201ENST00000580069 75 ntBASIC-1.86□□□□□ -2.71
COL6A3P12111 U4.5-201ENST00000617137 123 ntBASIC-1.86□□□□□ -2.71
COL6A3P12111 MIR548AH-201ENST00000637109 76 ntBASIC-1.86□□□□□ -2.71
COL6A3P12111 AC069439.1-201ENST00000494739 167 ntBASIC-1.86□□□□□ -2.71
COL6A3P12111 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.87□□□□□ -2.71
COL6A3P12111 MIR545-201ENST00000385085 106 ntBASIC-1.87□□□□□ -2.71
COL6A3P12111 RNU7-107P-201ENST00000459121 61 ntBASIC-1.87□□□□□ -2.71
COL6A3P12111 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.87□□□□□ -2.71
COL6A3P12111 SNORA81.3-201ENST00000517283 198 ntBASIC-1.87□□□□□ -2.71
COL6A3P12111 AL157777.2-201ENST00000258070 137 ntBASIC-1.87□□□□□ -2.71
COL6A3P12111 RNU6-836P-201ENST00000362920 107 ntBASIC-1.87□□□□□ -2.71
COL6A3P12111 RNU4-85P-201ENST00000364675 123 ntBASIC-1.87□□□□□ -2.71
COL6A3P12111 SNORD19B-201ENST00000459623 84 ntBASIC-1.87□□□□□ -2.71
COL6A3P12111 MIR1277-201ENST00000408536 78 ntBASIC-1.88□□□□□ -2.71
COL6A3P12111 RNU6-635P-201ENST00000516651 102 ntBASIC-1.88□□□□□ -2.71
COL6A3P12111 U6atac.1-201ENST00000616025 117 ntBASIC-1.88□□□□□ -2.71
COL6A3P12111 RNU6-797P-201ENST00000363101 109 ntBASIC-1.88□□□□□ -2.71
COL6A3P12111 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.88□□□□□ -2.71
COL6A3P12111 RNU6-315P-201ENST00000362666 107 ntBASIC-1.89□□□□□ -2.71
COL6A3P12111 RNU6-663P-201ENST00000391105 106 ntBASIC-1.89□□□□□ -2.71
COL6A3P12111 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.89□□□□□ -2.71
COL6A3P12111 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.89□□□□□ -2.71
COL6A3P12111 MIR590-201ENST00000385008 97 ntBASIC-1.89□□□□□ -2.71
COL6A3P12111 MT-TL1-201ENST00000386347 75 ntBASIC-1.89□□□□□ -2.71
COL6A3P12111 AL117187.1-201ENST00000555482 181 ntBASIC-1.89□□□□□ -2.71
COL6A3P12111 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.9□□□□□ -2.71
COL6A3P12111 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.9□□□□□ -2.71
COL6A3P12111 RNY3P1-201ENST00000365085 102 ntBASIC-1.9□□□□□ -2.71
COL6A3P12111 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.9□□□□□ -2.71
COL6A3P12111 SNORD33.1-201ENST00000516213 88 ntBASIC-1.9□□□□□ -2.71
COL6A3P12111 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.91□□□□□ -2.71
COL6A3P12111 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.91□□□□□ -2.71
COL6A3P12111 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.91□□□□□ -2.71
COL6A3P12111 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.91□□□□□ -2.71
COL6A3P12111 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.91□□□□□ -2.71
COL6A3P12111 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.91□□□□□ -2.72
COL6A3P12111 RNU6-497P-201ENST00000365316 104 ntBASIC-1.91□□□□□ -2.72
COL6A3P12111 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.91□□□□□ -2.72
COL6A3P12111 AC022559.1-201ENST00000520905 205 ntBASIC-1.91□□□□□ -2.72
COL6A3P12111 AC139792.2-201ENST00000624218 587 ntBASIC-1.91□□□□□ -2.72
COL6A3P12111 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.92□□□□□ -2.72
COL6A3P12111 RNU6-985P-201ENST00000410182 104 ntBASIC-1.92□□□□□ -2.72
COL6A3P12111 RNU6-979P-201ENST00000383896 107 ntBASIC-1.92□□□□□ -2.72
COL6A3P12111 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.92□□□□□ -2.72
COL6A3P12111 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.93□□□□□ -2.72
COL6A3P12111 RNU6-109P-201ENST00000516364 107 ntBASIC-1.93□□□□□ -2.72
COL6A3P12111 RNU6-184P-201ENST00000516514 107 ntBASIC-1.93□□□□□ -2.72
COL6A3P12111 SNORD116-18-201ENST00000383961 92 ntBASIC-1.93□□□□□ -2.72
COL6A3P12111 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.93□□□□□ -2.72
COL6A3P12111 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.93□□□□□ -2.72
COL6A3P12111 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.94□□□□□ -2.72
COL6A3P12111 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.94□□□□□ -2.72
COL6A3P12111 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.94□□□□□ -2.72
COL6A3P12111 SNORD116-21-201ENST00000384507 92 ntBASIC-1.94□□□□□ -2.72
COL6A3P12111 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.94□□□□□ -2.72
COL6A3P12111 MIR548X2-201ENST00000579776 100 ntBASIC-1.94□□□□□ -2.72
COL6A3P12111 U6.95-201ENST00000636931 70 ntBASIC-1.94□□□□□ -2.72
COL6A3P12111 MIR3938-201ENST00000582157 103 ntBASIC-1.94□□□□□ -2.72
COL6A3P12111 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.95□□□□□ -2.72
COL6A3P12111 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.95□□□□□ -2.72
COL6A3P12111 MIR1302-5-201ENST00000408164 150 ntBASIC-1.95□□□□□ -2.72
COL6A3P12111 SNORA40.13-201ENST00000516379 120 ntBASIC-1.95□□□□□ -2.72
COL6A3P12111 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.95□□□□□ -2.72
COL6A3P12111 RNU6-426P-201ENST00000516464 97 ntBASIC-1.95□□□□□ -2.72
COL6A3P12111 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.95□□□□□ -2.72
COL6A3P12111 MIR3974-201ENST00000637126 96 ntBASIC-1.95□□□□□ -2.72
COL6A3P12111 RNU6-122P-201ENST00000516818 107 ntBASIC-1.96□□□□□ -2.72
COL6A3P12111 MIR548AL-201ENST00000578416 97 ntBASIC-1.96□□□□□ -2.72
COL6A3P12111 MIR4680-201ENST00000580906 66 ntBASIC-1.96□□□□□ -2.72
COL6A3P12111 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.96□□□□□ -2.72
COL6A3P12111 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.96□□□□□ -2.72
COL6A3P12111 SNORD42.2-201ENST00000365570 69 ntBASIC-1.96□□□□□ -2.72
COL6A3P12111 SNORA40-201ENST00000388090 126 ntBASIC-1.96□□□□□ -2.72
COL6A3P12111 AC141273.2-201ENST00000618989 130 ntBASIC-1.96□□□□□ -2.72
COL6A3P12111 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.97□□□□□ -2.72
COL6A3P12111 MTND4LP9-201ENST00000427694 174 ntBASIC-1.97□□□□□ -2.72
COL6A3P12111 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.97□□□□□ -2.72
COL6A3P12111 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.97□□□□□ -2.73
COL6A3P12111 RNU6-394P-201ENST00000410735 107 ntBASIC-1.97□□□□□ -2.73
COL6A3P12111 RNU6-379P-201ENST00000363813 104 ntBASIC-1.98□□□□□ -2.73
COL6A3P12111 RNU6-907P-201ENST00000390924 102 ntBASIC-1.98□□□□□ -2.73
COL6A3P12111 AC134503.1-201ENST00000633048 54 ntBASIC-1.98□□□□□ -2.73
COL6A3P12111 RNU4-33P-201ENST00000364316 85 ntBASIC-1.98□□□□□ -2.73
COL6A3P12111 RNU6-219P-201ENST00000364728 107 ntBASIC-1.98□□□□□ -2.73
COL6A3P12111 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.98□□□□□ -2.73
COL6A3P12111 RNU2-16P-201ENST00000410712 136 ntBASIC-1.98□□□□□ -2.73
COL6A3P12111 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.99□□□□□ -2.73
COL6A3P12111 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.99□□□□□ -2.73
COL6A3P12111 AC004792.1-201ENST00000614523 137 ntBASIC-1.99□□□□□ -2.73
COL6A3P12111 MIR3128-201ENST00000581957 66 ntBASIC-2□□□□□ -2.73
COL6A3P12111 MIR1302-1-201ENST00000637932 143 ntBASIC-2□□□□□ -2.73
COL6A3P12111 Y_RNA.273-201ENST00000364703 102 ntBASIC-2□□□□□ -2.73
COL6A3P12111 RNU6-687P-201ENST00000516443 89 ntBASIC-2□□□□□ -2.73
COL6A3P12111 MIR3914-2-201ENST00000637339 95 ntBASIC-2□□□□□ -2.73
COL6A3P12111 RNU6-111P-201ENST00000517179 105 ntBASIC-2.01□□□□□ -2.73
COL6A3P12111 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.01□□□□□ -2.73
COL6A3P12111 RNU6-255P-201ENST00000516957 105 ntBASIC-2.01□□□□□ -2.73
COL6A3P12111 MIR548BB-201ENST00000626714 66 ntBASIC-2.01□□□□□ -2.73
COL6A3P12111 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.02□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms