Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
SNHG28P0DPA3 MIR196A2-201ENST00000385189 110 ntBASIC-0.23□□□□□ -2.45
SNHG28P0DPA3 MIR507-201ENST00000385234 94 ntBASIC-0.23□□□□□ -2.45
SNHG28P0DPA3 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.24□□□□□ -2.45
SNHG28P0DPA3 AC090616.4-201ENST00000448026 115 ntBASIC-0.24□□□□□ -2.45
SNHG28P0DPA3 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.25□□□□□ -2.45
SNHG28P0DPA3 SNORA13-201ENST00000458790 133 ntBASIC-0.25□□□□□ -2.45
SNHG28P0DPA3 MIR202-201ENST00000362219 110 ntBASIC-0.26□□□□□ -2.45
SNHG28P0DPA3 SNORD64-201ENST00000386683 67 ntBASIC-0.26□□□□□ -2.45
SNHG28P0DPA3 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.26□□□□□ -2.45
SNHG28P0DPA3 AC013734.1-201ENST00000619329 111 ntBASIC-0.26□□□□□ -2.45
SNHG28P0DPA3 RNU6-563P-201ENST00000364872 108 ntBASIC-0.27□□□□□ -2.45
SNHG28P0DPA3 MIR147A-201ENST00000385079 72 ntBASIC-0.27□□□□□ -2.45
SNHG28P0DPA3 SNORA3B-201ENST00000391305 131 ntBASIC-0.27□□□□□ -2.45
SNHG28P0DPA3 SNORD45.2-201ENST00000363552 72 ntBASIC-0.28□□□□□ -2.45
SNHG28P0DPA3 MIR581-201ENST00000384895 96 ntBASIC-0.28□□□□□ -2.45
SNHG28P0DPA3 MIR214-201ENST00000385214 110 ntBASIC-0.28□□□□□ -2.45
SNHG28P0DPA3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.28□□□□□ -2.45
SNHG28P0DPA3 RNU6-361P-201ENST00000364454 107 ntBASIC-0.29□□□□□ -2.46
SNHG28P0DPA3 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.29□□□□□ -2.46
SNHG28P0DPA3 SNORD126-201ENST00000459475 77 ntBASIC-0.29□□□□□ -2.46
SNHG28P0DPA3 MIR4426-201ENST00000640330 63 ntBASIC-0.29□□□□□ -2.46
SNHG28P0DPA3 RNU7-134P-201ENST00000458997 64 ntBASIC-0.3□□□□□ -2.46
SNHG28P0DPA3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.31□□□□□ -2.46
SNHG28P0DPA3 RNU6-320P-201ENST00000516511 106 ntBASIC-0.31□□□□□ -2.46
SNHG28P0DPA3 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.32□□□□□ -2.46
SNHG28P0DPA3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.32□□□□□ -2.46
SNHG28P0DPA3 SNORD114-14-201ENST00000362723 75 ntBASIC-0.33□□□□□ -2.46
SNHG28P0DPA3 SNORD14C-201ENST00000365382 88 ntBASIC-0.33□□□□□ -2.46
SNHG28P0DPA3 AC021146.6-201ENST00000514659 117 ntBASIC-0.33□□□□□ -2.46
SNHG28P0DPA3 SNORD114-25-201ENST00000363742 72 ntBASIC-0.34□□□□□ -2.46
SNHG28P0DPA3 SNORA17.4-201ENST00000391287 132 ntBASIC-0.34□□□□□ -2.46
SNHG28P0DPA3 MIR382-201ENST00000637119 76 ntBASIC-0.34□□□□□ -2.46
SNHG28P0DPA3 MIR6759-201ENST00000638110 65 ntBASIC-0.34□□□□□ -2.46
SNHG28P0DPA3 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.35□□□□□ -2.47
SNHG28P0DPA3 RNU6-59P-201ENST00000384787 107 ntBASIC-0.35□□□□□ -2.47
SNHG28P0DPA3 AL500527.2-201ENST00000454105 95 ntBASIC-0.35□□□□□ -2.47
SNHG28P0DPA3 AC120024.2-201ENST00000576526 175 ntBASIC-0.35□□□□□ -2.47
SNHG28P0DPA3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.36□□□□□ -2.47
SNHG28P0DPA3 MIR6818-201ENST00000621576 65 ntBASIC-0.36□□□□□ -2.47
SNHG28P0DPA3 RNA5SP275-201ENST00000363936 118 ntBASIC-0.37□□□□□ -2.47
SNHG28P0DPA3 MIR548N-201ENST00000408742 75 ntBASIC-0.37□□□□□ -2.47
SNHG28P0DPA3 RNU6-68P-201ENST00000516576 104 ntBASIC-0.37□□□□□ -2.47
SNHG28P0DPA3 Z95118.1-201ENST00000421372 247 ntBASIC-0.38□□□□□ -2.47
SNHG28P0DPA3 RNA5SP285-201ENST00000516619 119 ntBASIC-0.38□□□□□ -2.47
SNHG28P0DPA3 U6.97-201ENST00000636904 101 ntBASIC-0.38□□□□□ -2.47
SNHG28P0DPA3 RNU6-822P-201ENST00000362707 106 ntBASIC-0.39□□□□□ -2.47
SNHG28P0DPA3 SNORD114-31-201ENST00000363219 75 ntBASIC-0.39□□□□□ -2.47
SNHG28P0DPA3 RNU6-300P-201ENST00000459080 104 ntBASIC-0.39□□□□□ -2.47
SNHG28P0DPA3 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.4□□□□□ -2.47
SNHG28P0DPA3 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.4□□□□□ -2.47
SNHG28P0DPA3 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.4□□□□□ -2.47
SNHG28P0DPA3 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.41□□□□□ -2.48
SNHG28P0DPA3 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.43□□□□□ -2.48
SNHG28P0DPA3 IGLVI-20-201ENST00000519296 130 ntBASIC-0.43□□□□□ -2.48
SNHG28P0DPA3 SNORD114-28-201ENST00000363610 72 ntBASIC-0.44□□□□□ -2.48
SNHG28P0DPA3 RPS29P8-201ENST00000445109 171 ntBASIC-0.44□□□□□ -2.48
SNHG28P0DPA3 MIR4802-201ENST00000581881 80 ntBASIC-0.44□□□□□ -2.48
SNHG28P0DPA3 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.45□□□□□ -2.48
SNHG28P0DPA3 SNORD60-201ENST00000383903 83 ntBASIC-0.45□□□□□ -2.48
SNHG28P0DPA3 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.45□□□□□ -2.48
SNHG28P0DPA3 RNU6-79P-201ENST00000362511 107 ntBASIC-0.46□□□□□ -2.48
SNHG28P0DPA3 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.46□□□□□ -2.48
SNHG28P0DPA3 MIR23C-201ENST00000579846 100 ntBASIC-0.46□□□□□ -2.48
SNHG28P0DPA3 AP001180.6-201ENST00000584918 159 ntBASIC-0.46□□□□□ -2.48
SNHG28P0DPA3 MIR8064-201ENST00000612863 90 ntBASIC-0.46□□□□□ -2.48
SNHG28P0DPA3 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.46□□□□□ -2.48
SNHG28P0DPA3 MIR6874-201ENST00000635894 71 ntBASIC-0.46□□□□□ -2.48
SNHG28P0DPA3 MIR4317-201ENST00000637586 65 ntBASIC-0.46□□□□□ -2.48
SNHG28P0DPA3 RNU6-164P-201ENST00000364604 103 ntBASIC-0.47□□□□□ -2.48
SNHG28P0DPA3 RNY1P9-201ENST00000532431 109 ntBASIC-0.47□□□□□ -2.48
SNHG28P0DPA3 MIR548AZ-201ENST00000616567 95 ntBASIC-0.47□□□□□ -2.48
SNHG28P0DPA3 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.48□□□□□ -2.49
SNHG28P0DPA3 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.48□□□□□ -2.49
SNHG28P0DPA3 RNU6-695P-201ENST00000391157 104 ntBASIC-0.49□□□□□ -2.49
SNHG28P0DPA3 AC091912.2-201ENST00000624798 167 ntBASIC-0.49□□□□□ -2.49
SNHG28P0DPA3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.5□□□□□ -2.49
SNHG28P0DPA3 AC018880.2-201ENST00000414265 201 ntBASIC-0.5□□□□□ -2.49
SNHG28P0DPA3 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.51□□□□□ -2.49
SNHG28P0DPA3 snoU83B.1-201ENST00000517136 88 ntBASIC-0.51□□□□□ -2.49
SNHG28P0DPA3 MIR5589-201ENST00000579442 60 ntBASIC-0.51□□□□□ -2.49
SNHG28P0DPA3 RNU6-724P-201ENST00000390958 105 ntBASIC-0.52□□□□□ -2.49
SNHG28P0DPA3 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.52□□□□□ -2.49
SNHG28P0DPA3 MIR101-1-201ENST00000362265 75 ntBASIC-0.53□□□□□ -2.49
SNHG28P0DPA3 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.53□□□□□ -2.49
SNHG28P0DPA3 MIR8485-201ENST00000401372 91 ntBASIC-0.53□□□□□ -2.49
SNHG28P0DPA3 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.53□□□□□ -2.49
SNHG28P0DPA3 RNU6-176P-201ENST00000517196 105 ntBASIC-0.53□□□□□ -2.49
SNHG28P0DPA3 MIR4636-201ENST00000582271 80 ntBASIC-0.53□□□□□ -2.49
SNHG28P0DPA3 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.54□□□□□ -2.5
SNHG28P0DPA3 MIR4493-201ENST00000584016 73 ntBASIC-0.54□□□□□ -2.5
SNHG28P0DPA3 MIR4499-201ENST00000584834 69 ntBASIC-0.55□□□□□ -2.5
SNHG28P0DPA3 MIR196A1-201ENST00000388006 70 ntBASIC-0.56□□□□□ -2.5
SNHG28P0DPA3 U6.103-201ENST00000637085 61 ntBASIC-0.56□□□□□ -2.5
SNHG28P0DPA3 SNORD18C-201ENST00000362704 69 ntBASIC-0.57□□□□□ -2.5
SNHG28P0DPA3 RNU6-912P-201ENST00000363800 104 ntBASIC-0.57□□□□□ -2.5
SNHG28P0DPA3 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.58□□□□□ -2.5
SNHG28P0DPA3 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.61□□□□□ -2.51
SNHG28P0DPA3 uc_338.19-201ENST00000616808 99 ntBASIC-0.61□□□□□ -2.51
SNHG28P0DPA3 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 240.9 ms