Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.52□□□□□ -2.97
TRAV1-2A0A0B4J238 RNU6-426P-201ENST00000516464 97 ntBASIC-3.52□□□□□ -2.97
TRAV1-2A0A0B4J238 RNU6-231P-201ENST00000517122 103 ntBASIC-3.52□□□□□ -2.97
TRAV1-2A0A0B4J238 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-3.52□□□□□ -2.97
TRAV1-2A0A0B4J238 Y_RNA.47-201ENST00000362697 108 ntBASIC-3.53□□□□□ -2.97
TRAV1-2A0A0B4J238 RNU6-800P-201ENST00000384473 103 ntBASIC-3.53□□□□□ -2.97
TRAV1-2A0A0B4J238 MIR1302-5-201ENST00000408164 150 ntBASIC-3.53□□□□□ -2.97
TRAV1-2A0A0B4J238 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.53□□□□□ -2.97
TRAV1-2A0A0B4J238 MTND5P20-201ENST00000448677 143 ntBASIC-3.54□□□□□ -2.98
TRAV1-2A0A0B4J238 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.54□□□□□ -2.98
TRAV1-2A0A0B4J238 MIR548AI-201ENST00000579940 88 ntBASIC-3.54□□□□□ -2.98
TRAV1-2A0A0B4J238 MIR664A-201ENST00000626086 82 ntBASIC-3.54□□□□□ -2.98
TRAV1-2A0A0B4J238 SNORA40B-201ENST00000385573 128 ntBASIC-3.55□□□□□ -2.98
TRAV1-2A0A0B4J238 AL451105.1-201ENST00000450005 189 ntBASIC-3.55□□□□□ -2.98
TRAV1-2A0A0B4J238 RNU6-542P-201ENST00000516405 103 ntBASIC-3.55□□□□□ -2.98
TRAV1-2A0A0B4J238 SNORD116.2-201ENST00000391251 93 ntBASIC-3.56□□□□□ -2.98
TRAV1-2A0A0B4J238 SNORD60.1-201ENST00000362451 73 ntBASIC-3.57□□□□□ -2.98
TRAV1-2A0A0B4J238 RNU6-804P-201ENST00000384286 107 ntBASIC-3.57□□□□□ -2.98
TRAV1-2A0A0B4J238 SNORA40-201ENST00000388090 126 ntBASIC-3.57□□□□□ -2.98
TRAV1-2A0A0B4J238 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.57□□□□□ -2.98
TRAV1-2A0A0B4J238 MIR548BB-201ENST00000626714 66 ntBASIC-3.57□□□□□ -2.98
TRAV1-2A0A0B4J238 RNU6-219P-201ENST00000364728 107 ntBASIC-3.58□□□□□ -2.98
TRAV1-2A0A0B4J238 Y_RNA.460-201ENST00000384255 102 ntBASIC-3.58□□□□□ -2.98
TRAV1-2A0A0B4J238 SNORA19-201ENST00000384737 128 ntBASIC-3.58□□□□□ -2.98
TRAV1-2A0A0B4J238 RNU6-380P-201ENST00000410207 107 ntBASIC-3.58□□□□□ -2.98
TRAV1-2A0A0B4J238 Y_RNA.702-201ENST00000516843 96 ntBASIC-3.58□□□□□ -2.98
TRAV1-2A0A0B4J238 AL117187.1-201ENST00000555482 181 ntBASIC-3.58□□□□□ -2.98
TRAV1-2A0A0B4J238 SNORD116-21-201ENST00000384507 92 ntBASIC-3.59□□□□□ -2.98
TRAV1-2A0A0B4J238 Y_RNA.619-201ENST00000410951 90 ntBASIC-3.59□□□□□ -2.98
TRAV1-2A0A0B4J238 AC062037.2-201ENST00000610137 73 ntBASIC-3.59□□□□□ -2.98
TRAV1-2A0A0B4J238 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.59□□□□□ -2.98
TRAV1-2A0A0B4J238 RNU6-867P-201ENST00000364956 107 ntBASIC-3.6□□□□□ -2.99
TRAV1-2A0A0B4J238 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.6□□□□□ -2.99
TRAV1-2A0A0B4J238 AL359920.1-201ENST00000618332 176 ntBASIC-3.6□□□□□ -2.99
TRAV1-2A0A0B4J238 SNORD116-22-201ENST00000384430 92 ntBASIC-3.61□□□□□ -2.99
TRAV1-2A0A0B4J238 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.62□□□□□ -2.99
TRAV1-2A0A0B4J238 AC004792.1-201ENST00000614523 137 ntBASIC-3.62□□□□□ -2.99
TRAV1-2A0A0B4J238 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.63□□□□□ -2.99
TRAV1-2A0A0B4J238 RNU6-257P-201ENST00000410238 98 ntBASIC-3.63□□□□□ -2.99
TRAV1-2A0A0B4J238 RNU6-267P-201ENST00000516714 103 ntBASIC-3.63□□□□□ -2.99
TRAV1-2A0A0B4J238 SNORA40.16-201ENST00000517238 121 ntBASIC-3.63□□□□□ -2.99
TRAV1-2A0A0B4J238 MTCYBP6-201ENST00000441810 138 ntBASIC-3.64□□□□□ -2.99
TRAV1-2A0A0B4J238 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.65□□□□□ -2.99
TRAV1-2A0A0B4J238 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.65□□□□□ -2.99
TRAV1-2A0A0B4J238 RNU6-196P-201ENST00000384315 107 ntBASIC-3.66□□□□□ -3
TRAV1-2A0A0B4J238 RNU6-895P-201ENST00000384125 103 ntBASIC-3.67□□□□□ -3
TRAV1-2A0A0B4J238 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.68□□□□□ -3
TRAV1-2A0A0B4J238 MTND5P41-201ENST00000517498 206 ntBASIC-3.68□□□□□ -3
TRAV1-2A0A0B4J238 RNU6-797P-201ENST00000363101 109 ntBASIC-3.69□□□□□ -3
TRAV1-2A0A0B4J238 RNU6-742P-201ENST00000365289 107 ntBASIC-3.69□□□□□ -3
TRAV1-2A0A0B4J238 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.69□□□□□ -3
TRAV1-2A0A0B4J238 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.7□□□□□ -3
TRAV1-2A0A0B4J238 MIR154-201ENST00000385243 84 ntBASIC-3.71□□□□□ -3
TRAV1-2A0A0B4J238 Y_RNA.604-201ENST00000410574 102 ntBASIC-3.71□□□□□ -3
TRAV1-2A0A0B4J238 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.71□□□□□ -3
TRAV1-2A0A0B4J238 RNU6-315P-201ENST00000362666 107 ntBASIC-3.72□□□□□ -3
TRAV1-2A0A0B4J238 Y_RNA.544-201ENST00000384650 113 ntBASIC-3.72□□□□□ -3
TRAV1-2A0A0B4J238 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.72□□□□□ -3
TRAV1-2A0A0B4J238 MIR2052-201ENST00000636055 55 ntBASIC-3.72□□□□□ -3
TRAV1-2A0A0B4J238 RNU6-822P-201ENST00000362707 106 ntBASIC-3.73□□□□□ -3.01
TRAV1-2A0A0B4J238 AC006160.2-201ENST00000637708 154 ntBASIC-3.73□□□□□ -3.01
TRAV1-2A0A0B4J238 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.75□□□□□ -3.01
TRAV1-2A0A0B4J238 RNU7-119P-201ENST00000459279 63 ntBASIC-3.75□□□□□ -3.01
TRAV1-2A0A0B4J238 Y_RNA.218-201ENST00000364218 104 ntBASIC-3.76□□□□□ -3.01
TRAV1-2A0A0B4J238 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.76□□□□□ -3.01
TRAV1-2A0A0B4J238 MIR568-201ENST00000385036 95 ntBASIC-3.76□□□□□ -3.01
TRAV1-2A0A0B4J238 RNU6-70P-201ENST00000516438 60 ntBASIC-3.76□□□□□ -3.01
TRAV1-2A0A0B4J238 RNU6-419P-201ENST00000517030 63 ntBASIC-3.76□□□□□ -3.01
TRAV1-2A0A0B4J238 SNORA63-201ENST00000363450 132 ntBASIC-3.77□□□□□ -3.01
TRAV1-2A0A0B4J238 RNU6-200P-201ENST00000364743 107 ntBASIC-3.77□□□□□ -3.01
TRAV1-2A0A0B4J238 RNU6-737P-201ENST00000365370 107 ntBASIC-3.77□□□□□ -3.01
TRAV1-2A0A0B4J238 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.77□□□□□ -3.01
TRAV1-2A0A0B4J238 MTCYBP9-201ENST00000431021 303 ntBASIC-3.77□□□□□ -3.01
TRAV1-2A0A0B4J238 RNU6-122P-201ENST00000516818 107 ntBASIC-3.77□□□□□ -3.01
TRAV1-2A0A0B4J238 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.78□□□□□ -3.01
TRAV1-2A0A0B4J238 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.79□□□□□ -3.02
TRAV1-2A0A0B4J238 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.79□□□□□ -3.02
TRAV1-2A0A0B4J238 MIR1302-3-201ENST00000408128 138 ntBASIC-3.79□□□□□ -3.02
TRAV1-2A0A0B4J238 AC062037.1-201ENST00000605302 128 ntBASIC-3.79□□□□□ -3.02
TRAV1-2A0A0B4J238 MIR548S-201ENST00000581352 82 ntBASIC-3.81□□□□□ -3.02
TRAV1-2A0A0B4J238 AC008737.2-201ENST00000599446 118 ntBASIC-3.81□□□□□ -3.02
TRAV1-2A0A0B4J238 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.82□□□□□ -3.02
TRAV1-2A0A0B4J238 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.82□□□□□ -3.02
TRAV1-2A0A0B4J238 RNU6-675P-201ENST00000384236 104 ntBASIC-3.82□□□□□ -3.02
TRAV1-2A0A0B4J238 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.83□□□□□ -3.02
TRAV1-2A0A0B4J238 AC139453.2-201ENST00000487255 133 ntBASIC-3.83□□□□□ -3.02
TRAV1-2A0A0B4J238 AC044792.1-201ENST00000593294 196 ntBASIC-3.83□□□□□ -3.02
TRAV1-2A0A0B4J238 SNORA25.5-201ENST00000363782 126 ntBASIC-3.84□□□□□ -3.02
TRAV1-2A0A0B4J238 RNU6-907P-201ENST00000390924 102 ntBASIC-3.84□□□□□ -3.02
TRAV1-2A0A0B4J238 SNORD115-45-201ENST00000391078 81 ntBASIC-3.84□□□□□ -3.02
TRAV1-2A0A0B4J238 AL353621.2-201ENST00000605340 133 ntBASIC-3.84□□□□□ -3.02
TRAV1-2A0A0B4J238 MALAT1.1-201ENST00000618249 95 ntBASIC-3.84□□□□□ -3.02
TRAV1-2A0A0B4J238 MIR656-201ENST00000385224 78 ntBASIC-3.85□□□□□ -3.03
TRAV1-2A0A0B4J238 RNU7-200P-201ENST00000516105 62 ntBASIC-3.85□□□□□ -3.03
TRAV1-2A0A0B4J238 RNU6-854P-201ENST00000364036 107 ntBASIC-3.88□□□□□ -3.03
TRAV1-2A0A0B4J238 RNU6-687P-201ENST00000516443 89 ntBASIC-3.88□□□□□ -3.03
TRAV1-2A0A0B4J238 SNORD116-14-201ENST00000383894 92 ntBASIC-3.89□□□□□ -3.03
TRAV1-2A0A0B4J238 SNORD116-17-201ENST00000383929 92 ntBASIC-3.89□□□□□ -3.03
TRAV1-2A0A0B4J238 SNORD116-15-201ENST00000384445 92 ntBASIC-3.89□□□□□ -3.03
TRAV1-2A0A0B4J238 SNORD116-19-201ENST00000384729 92 ntBASIC-3.89□□□□□ -3.03
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms