Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNU6-194P-201ENST00000363862 105 ntBASIC-2.15□□□□□ -2.75
HHLA3Q9XRX5 MTND4LP1-201ENST00000446263 157 ntBASIC-2.15□□□□□ -2.75
HHLA3Q9XRX5 RNU6-247P-201ENST00000362636 107 ntBASIC-2.16□□□□□ -2.76
HHLA3Q9XRX5 RNA5SP215-201ENST00000363440 122 ntBASIC-2.16□□□□□ -2.76
HHLA3Q9XRX5 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.16□□□□□ -2.76
HHLA3Q9XRX5 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.16□□□□□ -2.76
HHLA3Q9XRX5 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.17□□□□□ -2.76
HHLA3Q9XRX5 RNU6-766P-201ENST00000362478 107 ntBASIC-2.17□□□□□ -2.76
HHLA3Q9XRX5 RNU6-497P-201ENST00000365316 104 ntBASIC-2.17□□□□□ -2.76
HHLA3Q9XRX5 AC013734.1-201ENST00000619329 111 ntBASIC-2.17□□□□□ -2.76
HHLA3Q9XRX5 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.17□□□□□ -2.76
HHLA3Q9XRX5 SNORD1B-201ENST00000363091 84 ntBASIC-2.18□□□□□ -2.76
HHLA3Q9XRX5 RNU6-219P-201ENST00000364728 107 ntBASIC-2.18□□□□□ -2.76
HHLA3Q9XRX5 SNORD115-31-201ENST00000365318 82 ntBASIC-2.18□□□□□ -2.76
HHLA3Q9XRX5 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.18□□□□□ -2.76
HHLA3Q9XRX5 SNORA41B-201ENST00000384785 128 ntBASIC-2.18□□□□□ -2.76
HHLA3Q9XRX5 RNY4P27-201ENST00000363341 96 ntBASIC-2.19□□□□□ -2.76
HHLA3Q9XRX5 RNU6-668P-201ENST00000364180 107 ntBASIC-2.19□□□□□ -2.76
HHLA3Q9XRX5 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.19□□□□□ -2.76
HHLA3Q9XRX5 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.19□□□□□ -2.76
HHLA3Q9XRX5 RNU6-118P-201ENST00000516552 102 ntBASIC-2.19□□□□□ -2.76
HHLA3Q9XRX5 MIR548W-201ENST00000581970 74 ntBASIC-2.19□□□□□ -2.76
HHLA3Q9XRX5 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.19□□□□□ -2.76
HHLA3Q9XRX5 MIR548BB-201ENST00000626714 66 ntBASIC-2.19□□□□□ -2.76
HHLA3Q9XRX5 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.2□□□□□ -2.76
HHLA3Q9XRX5 SNORD116-22-201ENST00000384430 92 ntBASIC-2.2□□□□□ -2.76
HHLA3Q9XRX5 snoU13.10-201ENST00000459301 103 ntBASIC-2.2□□□□□ -2.76
HHLA3Q9XRX5 RNU6-267P-201ENST00000516714 103 ntBASIC-2.2□□□□□ -2.76
HHLA3Q9XRX5 MIR4484-201ENST00000582855 83 ntBASIC-2.2□□□□□ -2.76
HHLA3Q9XRX5 SNORD113.1-201ENST00000363280 73 ntBASIC-2.21□□□□□ -2.76
HHLA3Q9XRX5 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.21□□□□□ -2.76
HHLA3Q9XRX5 MIR3139-201ENST00000579145 76 ntBASIC-2.21□□□□□ -2.76
HHLA3Q9XRX5 AC005520.4-201ENST00000604337 90 ntBASIC-2.21□□□□□ -2.76
HHLA3Q9XRX5 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.21□□□□□ -2.76
HHLA3Q9XRX5 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.22□□□□□ -2.76
HHLA3Q9XRX5 RNU6-129P-201ENST00000391022 107 ntBASIC-2.22□□□□□ -2.76
HHLA3Q9XRX5 RNU6-402P-201ENST00000410678 103 ntBASIC-2.22□□□□□ -2.76
HHLA3Q9XRX5 MIR2052-201ENST00000636055 55 ntBASIC-2.22□□□□□ -2.76
HHLA3Q9XRX5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.23□□□□□ -2.77
HHLA3Q9XRX5 RNU7-151P-201ENST00000516930 53 ntBASIC-2.23□□□□□ -2.77
HHLA3Q9XRX5 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.23□□□□□ -2.77
HHLA3Q9XRX5 U6.97-201ENST00000636904 101 ntBASIC-2.23□□□□□ -2.77
HHLA3Q9XRX5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.23□□□□□ -2.77
HHLA3Q9XRX5 SNORA27.2-201ENST00000363365 126 ntBASIC-2.24□□□□□ -2.77
HHLA3Q9XRX5 RNY4P18-201ENST00000391107 89 ntBASIC-2.24□□□□□ -2.77
HHLA3Q9XRX5 RNU6-995P-201ENST00000391244 107 ntBASIC-2.24□□□□□ -2.77
HHLA3Q9XRX5 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.24□□□□□ -2.77
HHLA3Q9XRX5 MIR4748-201ENST00000578076 82 ntBASIC-2.24□□□□□ -2.77
HHLA3Q9XRX5 MIR466-201ENST00000580653 84 ntBASIC-2.24□□□□□ -2.77
HHLA3Q9XRX5 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.24□□□□□ -2.77
HHLA3Q9XRX5 MIR8053-201ENST00000613344 75 ntBASIC-2.24□□□□□ -2.77
HHLA3Q9XRX5 MIR1297-201ENST00000637311 77 ntBASIC-2.24□□□□□ -2.77
HHLA3Q9XRX5 RNA5SP173-201ENST00000364857 136 ntBASIC-2.25□□□□□ -2.77
HHLA3Q9XRX5 RNU6-669P-201ENST00000365575 107 ntBASIC-2.25□□□□□ -2.77
HHLA3Q9XRX5 SNORD45A-201ENST00000384512 84 ntBASIC-2.26□□□□□ -2.77
HHLA3Q9XRX5 SNORD63.2-201ENST00000516303 64 ntBASIC-2.26□□□□□ -2.77
HHLA3Q9XRX5 MIR579-201ENST00000385221 98 ntBASIC-2.27□□□□□ -2.77
HHLA3Q9XRX5 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.27□□□□□ -2.77
HHLA3Q9XRX5 RNU6-589P-201ENST00000516485 107 ntBASIC-2.27□□□□□ -2.77
HHLA3Q9XRX5 MIR7978-201ENST00000636158 59 ntBASIC-2.28□□□□□ -2.77
HHLA3Q9XRX5 MALAT1.1-201ENST00000618249 95 ntBASIC-2.29□□□□□ -2.78
HHLA3Q9XRX5 MT-TM-201ENST00000387377 68 ntBASIC-2.3□□□□□ -2.78
HHLA3Q9XRX5 RNU6-172P-201ENST00000411000 93 ntBASIC-2.3□□□□□ -2.78
HHLA3Q9XRX5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.3□□□□□ -2.78
HHLA3Q9XRX5 MIR664A-201ENST00000626086 82 ntBASIC-2.3□□□□□ -2.78
HHLA3Q9XRX5 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.3□□□□□ -2.78
HHLA3Q9XRX5 SNORA63.4-201ENST00000362763 126 ntBASIC-2.31□□□□□ -2.78
HHLA3Q9XRX5 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.31□□□□□ -2.78
HHLA3Q9XRX5 RNY3P8-201ENST00000411366 126 ntBASIC-2.31□□□□□ -2.78
HHLA3Q9XRX5 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.31□□□□□ -2.78
HHLA3Q9XRX5 FTX_4.1-201ENST00000616291 147 ntBASIC-2.31□□□□□ -2.78
HHLA3Q9XRX5 RNU6-755P-201ENST00000364400 103 ntBASIC-2.32□□□□□ -2.78
HHLA3Q9XRX5 MIR125B1-201ENST00000385236 88 ntBASIC-2.32□□□□□ -2.78
HHLA3Q9XRX5 RNU6-523P-201ENST00000516304 54 ntBASIC-2.32□□□□□ -2.78
HHLA3Q9XRX5 MIR450A1-201ENST00000362262 91 ntBASIC-2.33□□□□□ -2.78
HHLA3Q9XRX5 RNU6-959P-201ENST00000384671 107 ntBASIC-2.33□□□□□ -2.78
HHLA3Q9XRX5 RNU6-380P-201ENST00000410207 107 ntBASIC-2.33□□□□□ -2.78
HHLA3Q9XRX5 AC008267.6-201ENST00000441664 139 ntBASIC-2.33□□□□□ -2.78
HHLA3Q9XRX5 AC097484.2-201ENST00000509147 251 ntBASIC-2.33□□□□□ -2.78
HHLA3Q9XRX5 AP001318.4-201ENST00000616637 121 ntBASIC-2.33□□□□□ -2.78
HHLA3Q9XRX5 AC006160.2-201ENST00000637708 154 ntBASIC-2.33□□□□□ -2.78
HHLA3Q9XRX5 SNORD18C-201ENST00000362704 69 ntBASIC-2.34□□□□□ -2.78
HHLA3Q9XRX5 AL031737.1-201ENST00000450125 223 ntBASIC-2.34□□□□□ -2.78
HHLA3Q9XRX5 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.35□□□□□ -2.79
HHLA3Q9XRX5 RNU6-974P-201ENST00000384099 108 ntBASIC-2.35□□□□□ -2.79
HHLA3Q9XRX5 AL365222.1-201ENST00000614661 98 ntBASIC-2.35□□□□□ -2.79
HHLA3Q9XRX5 RNU6-675P-201ENST00000384236 104 ntBASIC-2.36□□□□□ -2.79
HHLA3Q9XRX5 MIR581-201ENST00000384895 96 ntBASIC-2.36□□□□□ -2.79
HHLA3Q9XRX5 SNORA40.13-201ENST00000516379 120 ntBASIC-2.36□□□□□ -2.79
HHLA3Q9XRX5 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.37□□□□□ -2.79
HHLA3Q9XRX5 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.37□□□□□ -2.79
HHLA3Q9XRX5 MIR3133-201ENST00000583157 78 ntBASIC-2.37□□□□□ -2.79
HHLA3Q9XRX5 RNU6-119P-201ENST00000364882 107 ntBASIC-2.38□□□□□ -2.79
HHLA3Q9XRX5 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.38□□□□□ -2.79
HHLA3Q9XRX5 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.38□□□□□ -2.79
HHLA3Q9XRX5 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.39□□□□□ -2.79
HHLA3Q9XRX5 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.39□□□□□ -2.79
HHLA3Q9XRX5 SNORD116-24-201ENST00000384549 92 ntBASIC-2.39□□□□□ -2.79
HHLA3Q9XRX5 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.39□□□□□ -2.79
HHLA3Q9XRX5 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.39□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms