Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU6-1262P-201ENST00000516217 96 ntBASIC0.41□□□□□ -2.34
ZC3H4Q9UPT8 RNU7-151P-201ENST00000516930 53 ntBASIC0.41□□□□□ -2.34
ZC3H4Q9UPT8 MIR4464-201ENST00000580818 92 ntBASIC0.41□□□□□ -2.34
ZC3H4Q9UPT8 AL445584.3-201ENST00000617173 78 ntBASIC0.41□□□□□ -2.34
ZC3H4Q9UPT8 RNU6-696P-201ENST00000390834 107 ntBASIC0.4□□□□□ -2.34
ZC3H4Q9UPT8 MIR4490-201ENST00000582647 84 ntBASIC0.39□□□□□ -2.35
ZC3H4Q9UPT8 U4.2-201ENST00000618561 85 ntBASIC0.39□□□□□ -2.35
ZC3H4Q9UPT8 RNU6-753P-201ENST00000363926 107 ntBASIC0.38□□□□□ -2.35
ZC3H4Q9UPT8 MIR145-201ENST00000384967 88 ntBASIC0.38□□□□□ -2.35
ZC3H4Q9UPT8 AC096531.1-201ENST00000419107 107 ntBASIC0.38□□□□□ -2.35
ZC3H4Q9UPT8 SNORD114-5-201ENST00000362928 70 ntBASIC0.38□□□□□ -2.35
ZC3H4Q9UPT8 AL445193.1-201ENST00000441183 141 ntBASIC0.37□□□□□ -2.35
ZC3H4Q9UPT8 RNA5SP214-201ENST00000363378 118 ntBASIC0.36□□□□□ -2.35
ZC3H4Q9UPT8 MIR548AA1-201ENST00000384971 97 ntBASIC0.36□□□□□ -2.35
ZC3H4Q9UPT8 RNU4-88P-201ENST00000411220 86 ntBASIC0.36□□□□□ -2.35
ZC3H4Q9UPT8 SNX3P1X-201ENST00000414887 175 ntBASIC0.36□□□□□ -2.35
ZC3H4Q9UPT8 AC244250.2-201ENST00000418731 148 ntBASIC0.36□□□□□ -2.35
ZC3H4Q9UPT8 MIR5190-201ENST00000581537 80 ntBASIC0.36□□□□□ -2.35
ZC3H4Q9UPT8 SNORD114-31-201ENST00000363219 75 ntBASIC0.35□□□□□ -2.35
ZC3H4Q9UPT8 RNU4-33P-201ENST00000364316 85 ntBASIC0.35□□□□□ -2.35
ZC3H4Q9UPT8 AC104692.1-201ENST00000472406 90 ntBASIC0.35□□□□□ -2.35
ZC3H4Q9UPT8 MIR6854-201ENST00000614935 69 ntBASIC0.35□□□□□ -2.35
ZC3H4Q9UPT8 MIR8068-201ENST00000618032 68 ntBASIC0.35□□□□□ -2.35
ZC3H4Q9UPT8 MIR604-201ENST00000384880 94 ntBASIC0.34□□□□□ -2.36
ZC3H4Q9UPT8 MIR124-2-201ENST00000385081 109 ntBASIC0.34□□□□□ -2.36
ZC3H4Q9UPT8 RNU6-1174P-201ENST00000517278 101 ntBASIC0.34□□□□□ -2.36
ZC3H4Q9UPT8 MIR548X-201ENST00000580069 75 ntBASIC0.34□□□□□ -2.36
ZC3H4Q9UPT8 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.34□□□□□ -2.36
ZC3H4Q9UPT8 RNU6-924P-201ENST00000362926 108 ntBASIC0.33□□□□□ -2.36
ZC3H4Q9UPT8 RNU7-165P-201ENST00000458864 60 ntBASIC0.33□□□□□ -2.36
ZC3H4Q9UPT8 SNORD63.1-201ENST00000516178 80 ntBASIC0.33□□□□□ -2.36
ZC3H4Q9UPT8 RNU6-980P-201ENST00000516925 103 ntBASIC0.33□□□□□ -2.36
ZC3H4Q9UPT8 MIR4493-201ENST00000584016 73 ntBASIC0.33□□□□□ -2.36
ZC3H4Q9UPT8 Y_RNA.610-201ENST00000410681 103 ntBASIC0.32□□□□□ -2.36
ZC3H4Q9UPT8 RNU7-160P-201ENST00000516660 62 ntBASIC0.32□□□□□ -2.36
ZC3H4Q9UPT8 AP001180.6-201ENST00000584918 159 ntBASIC0.32□□□□□ -2.36
ZC3H4Q9UPT8 SNORD56B-201ENST00000384713 71 ntBASIC0.31□□□□□ -2.36
ZC3H4Q9UPT8 RNU6-1267P-201ENST00000410747 107 ntBASIC0.31□□□□□ -2.36
ZC3H4Q9UPT8 MIR4743-201ENST00000584576 69 ntBASIC0.31□□□□□ -2.36
ZC3H4Q9UPT8 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.31□□□□□ -2.36
ZC3H4Q9UPT8 Y_RNA.69-201ENST00000362885 109 ntBASIC0.3□□□□□ -2.36
ZC3H4Q9UPT8 SNORA42.1-201ENST00000363515 137 ntBASIC0.3□□□□□ -2.36
ZC3H4Q9UPT8 RNY1P9-201ENST00000532431 109 ntBASIC0.3□□□□□ -2.36
ZC3H4Q9UPT8 RNU6-46P-201ENST00000383860 107 ntBASIC0.28□□□□□ -2.36
ZC3H4Q9UPT8 Y_RNA.613-201ENST00000410726 97 ntBASIC0.28□□□□□ -2.36
ZC3H4Q9UPT8 SNORD95.1-201ENST00000364099 68 ntBASIC0.27□□□□□ -2.37
ZC3H4Q9UPT8 Y_RNA.468-201ENST00000384298 102 ntBASIC0.27□□□□□ -2.37
ZC3H4Q9UPT8 RNU6-929P-201ENST00000384429 107 ntBASIC0.27□□□□□ -2.37
ZC3H4Q9UPT8 RNU6-1206P-201ENST00000516339 103 ntBASIC0.27□□□□□ -2.37
ZC3H4Q9UPT8 MIR5093-201ENST00000583199 100 ntBASIC0.27□□□□□ -2.37
ZC3H4Q9UPT8 SNORD114-9-201ENST00000364370 72 ntBASIC0.26□□□□□ -2.37
ZC3H4Q9UPT8 MIR601-201ENST00000385256 79 ntBASIC0.26□□□□□ -2.37
ZC3H4Q9UPT8 MIR1207-201ENST00000408249 87 ntBASIC0.26□□□□□ -2.37
ZC3H4Q9UPT8 RNU6-1238P-201ENST00000517215 102 ntBASIC0.26□□□□□ -2.37
ZC3H4Q9UPT8 Y_RNA.514-201ENST00000384528 112 ntBASIC0.25□□□□□ -2.37
ZC3H4Q9UPT8 MIR4768-201ENST00000585270 74 ntBASIC0.25□□□□□ -2.37
ZC3H4Q9UPT8 RNU6-828P-201ENST00000364876 107 ntBASIC0.24□□□□□ -2.37
ZC3H4Q9UPT8 SNORD49B-201ENST00000365172 72 ntBASIC0.24□□□□□ -2.37
ZC3H4Q9UPT8 RNU6-419P-201ENST00000517030 63 ntBASIC0.24□□□□□ -2.37
ZC3H4Q9UPT8 Y_RNA.413-201ENST00000384007 102 ntBASIC0.23□□□□□ -2.37
ZC3H4Q9UPT8 MIR548Q-201ENST00000408404 100 ntBASIC0.23□□□□□ -2.37
ZC3H4Q9UPT8 Y_RNA.754-201ENST00000476024 102 ntBASIC0.23□□□□□ -2.37
ZC3H4Q9UPT8 Y_RNA.790-201ENST00000614282 102 ntBASIC0.23□□□□□ -2.37
ZC3H4Q9UPT8 Y_RNA.782-201ENST00000614695 102 ntBASIC0.23□□□□□ -2.37
ZC3H4Q9UPT8 RNU6-732P-201ENST00000516033 103 ntBASIC0.22□□□□□ -2.37
ZC3H4Q9UPT8 RNU6-247P-201ENST00000362636 107 ntBASIC0.21□□□□□ -2.38
ZC3H4Q9UPT8 MIR371B-201ENST00000638082 66 ntBASIC0.21□□□□□ -2.38
ZC3H4Q9UPT8 RPS29P8-201ENST00000445109 171 ntBASIC0.2□□□□□ -2.38
ZC3H4Q9UPT8 AC114755.3-201ENST00000481111 251 ntBASIC0.2□□□□□ -2.38
ZC3H4Q9UPT8 MIR101-1-201ENST00000362265 75 ntBASIC0.19□□□□□ -2.38
ZC3H4Q9UPT8 MIR125B1-201ENST00000385236 88 ntBASIC0.18□□□□□ -2.38
ZC3H4Q9UPT8 MIR548AX-201ENST00000580117 73 ntBASIC0.18□□□□□ -2.38
ZC3H4Q9UPT8 MIR655-201ENST00000362159 97 ntBASIC0.17□□□□□ -2.38
ZC3H4Q9UPT8 RNU6-1233P-201ENST00000362922 102 ntBASIC0.17□□□□□ -2.38
ZC3H4Q9UPT8 Y_RNA.139-201ENST00000363464 102 ntBASIC0.17□□□□□ -2.38
ZC3H4Q9UPT8 RNU6-1111P-201ENST00000391118 107 ntBASIC0.17□□□□□ -2.38
ZC3H4Q9UPT8 MIR198-201ENST00000637333 62 ntBASIC0.17□□□□□ -2.38
ZC3H4Q9UPT8 MIR224-201ENST00000384889 81 ntBASIC0.16□□□□□ -2.38
ZC3H4Q9UPT8 SNORD38.3-201ENST00000516599 73 ntBASIC0.16□□□□□ -2.38
ZC3H4Q9UPT8 RNU6-930P-201ENST00000390938 100 ntBASIC0.15□□□□□ -2.38
ZC3H4Q9UPT8 SNORD63.2-201ENST00000516303 64 ntBASIC0.15□□□□□ -2.38
ZC3H4Q9UPT8 MIR4320-201ENST00000636981 65 ntBASIC0.15□□□□□ -2.38
ZC3H4Q9UPT8 RNU4-63P-201ENST00000411313 118 ntBASIC0.14□□□□□ -2.39
ZC3H4Q9UPT8 SNORD18.2-201ENST00000459604 70 ntBASIC0.14□□□□□ -2.39
ZC3H4Q9UPT8 MIR4280-201ENST00000582178 76 ntBASIC0.14□□□□□ -2.39
ZC3H4Q9UPT8 MIR3170-201ENST00000582699 77 ntBASIC0.13□□□□□ -2.39
ZC3H4Q9UPT8 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
ZC3H4Q9UPT8 Y_RNA.684-201ENST00000516510 99 ntBASIC0.13□□□□□ -2.39
ZC3H4Q9UPT8 SNORD114-16-201ENST00000363044 70 ntBASIC0.12□□□□□ -2.39
ZC3H4Q9UPT8 SNORD114-3-201ENST00000364969 75 ntBASIC0.12□□□□□ -2.39
ZC3H4Q9UPT8 MIR4667-201ENST00000578933 66 ntBASIC0.12□□□□□ -2.39
ZC3H4Q9UPT8 MIR4645-201ENST00000583158 77 ntBASIC0.12□□□□□ -2.39
ZC3H4Q9UPT8 SNORD114-12-201ENST00000365400 75 ntBASIC0.11□□□□□ -2.39
ZC3H4Q9UPT8 AL451105.1-201ENST00000450005 189 ntBASIC0.11□□□□□ -2.39
ZC3H4Q9UPT8 RNA5SP66-201ENST00000517178 101 ntBASIC0.11□□□□□ -2.39
ZC3H4Q9UPT8 MIR6851-201ENST00000617060 67 ntBASIC0.11□□□□□ -2.39
ZC3H4Q9UPT8 MIR214-201ENST00000385214 110 ntBASIC0.1□□□□□ -2.39
ZC3H4Q9UPT8 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
ZC3H4Q9UPT8 SNORD114-28-201ENST00000363610 72 ntBASIC0.09□□□□□ -2.4
ZC3H4Q9UPT8 RNU6-974P-201ENST00000384099 108 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms