Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC096531.1-201ENST00000419107 107 ntBASIC0.4□□□□□ -2.35
NOTCH3Q9UM47 RNU6-1206P-201ENST00000516339 103 ntBASIC0.4□□□□□ -2.35
NOTCH3Q9UM47 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.4□□□□□ -2.35
NOTCH3Q9UM47 RNU6-1008P-201ENST00000384160 104 ntBASIC0.39□□□□□ -2.35
NOTCH3Q9UM47 RNU6-724P-201ENST00000390958 105 ntBASIC0.39□□□□□ -2.35
NOTCH3Q9UM47 Y_RNA.583-201ENST00000391033 113 ntBASIC0.39□□□□□ -2.35
NOTCH3Q9UM47 AL445584.3-201ENST00000617173 78 ntBASIC0.39□□□□□ -2.35
NOTCH3Q9UM47 MIR26B-201ENST00000362251 77 ntBASIC0.39□□□□□ -2.35
NOTCH3Q9UM47 RNU6-986P-201ENST00000363133 102 ntBASIC0.39□□□□□ -2.35
NOTCH3Q9UM47 SNORD45.2-201ENST00000363552 72 ntBASIC0.39□□□□□ -2.35
NOTCH3Q9UM47 RNU6-46P-201ENST00000383860 107 ntBASIC0.39□□□□□ -2.35
NOTCH3Q9UM47 RNU6-945P-201ENST00000383947 107 ntBASIC0.39□□□□□ -2.35
NOTCH3Q9UM47 RNU6-974P-201ENST00000384099 108 ntBASIC0.39□□□□□ -2.35
NOTCH3Q9UM47 MIR29B1-201ENST00000385015 81 ntBASIC0.39□□□□□ -2.35
NOTCH3Q9UM47 AL353803.5-201ENST00000599815 141 ntBASIC0.39□□□□□ -2.35
NOTCH3Q9UM47 U6.103-201ENST00000637085 61 ntBASIC0.39□□□□□ -2.35
NOTCH3Q9UM47 RNU6-995P-201ENST00000391244 107 ntBASIC0.38□□□□□ -2.35
NOTCH3Q9UM47 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.38□□□□□ -2.35
NOTCH3Q9UM47 uc_338.36-201ENST00000622331 158 ntBASIC0.38□□□□□ -2.35
NOTCH3Q9UM47 RNY4P27-201ENST00000363341 96 ntBASIC0.38□□□□□ -2.35
NOTCH3Q9UM47 Y_RNA.403-201ENST00000383977 101 ntBASIC0.38□□□□□ -2.35
NOTCH3Q9UM47 AL391099.1-201ENST00000624635 187 ntBASIC0.38□□□□□ -2.35
NOTCH3Q9UM47 MIR103A1-201ENST00000362165 78 ntBASIC0.37□□□□□ -2.35
NOTCH3Q9UM47 Y_RNA.109-201ENST00000363215 102 ntBASIC0.37□□□□□ -2.35
NOTCH3Q9UM47 SNORD49B-201ENST00000365172 72 ntBASIC0.37□□□□□ -2.35
NOTCH3Q9UM47 MIR3170-201ENST00000582699 77 ntBASIC0.37□□□□□ -2.35
NOTCH3Q9UM47 Y_RNA.321-201ENST00000365149 102 ntBASIC0.37□□□□□ -2.35
NOTCH3Q9UM47 MIR876-201ENST00000401147 81 ntBASIC0.36□□□□□ -2.35
NOTCH3Q9UM47 RNU6-1238P-201ENST00000517215 102 ntBASIC0.36□□□□□ -2.35
NOTCH3Q9UM47 RN7SL660P-201ENST00000614852 299 ntBASIC0.36□□□□□ -2.35
NOTCH3Q9UM47 MIR499B-201ENST00000636498 73 ntBASIC0.36□□□□□ -2.35
NOTCH3Q9UM47 MIR643-201ENST00000385267 97 ntBASIC0.36□□□□□ -2.35
NOTCH3Q9UM47 RNU6-1133P-201ENST00000410963 100 ntBASIC0.36□□□□□ -2.35
NOTCH3Q9UM47 RNU7-129P-201ENST00000516128 62 ntBASIC0.36□□□□□ -2.35
NOTCH3Q9UM47 MIR4464-201ENST00000580818 92 ntBASIC0.36□□□□□ -2.35
NOTCH3Q9UM47 MIR6854-201ENST00000614935 69 ntBASIC0.36□□□□□ -2.35
NOTCH3Q9UM47 RNU6-110P-201ENST00000384508 104 ntBASIC0.35□□□□□ -2.35
NOTCH3Q9UM47 RNU6-939P-201ENST00000384634 107 ntBASIC0.35□□□□□ -2.35
NOTCH3Q9UM47 MIR6888-201ENST00000621977 67 ntBASIC0.35□□□□□ -2.35
NOTCH3Q9UM47 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
NOTCH3Q9UM47 RNU7-55P-201ENST00000459426 62 ntBASIC0.35□□□□□ -2.35
NOTCH3Q9UM47 MIR4317-201ENST00000637586 65 ntBASIC0.35□□□□□ -2.35
NOTCH3Q9UM47 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.35
NOTCH3Q9UM47 RNU6-828P-201ENST00000364876 107 ntBASIC0.34□□□□□ -2.36
NOTCH3Q9UM47 MIR1285-2-201ENST00000408311 88 ntBASIC0.34□□□□□ -2.36
NOTCH3Q9UM47 SNORD18.2-201ENST00000459604 70 ntBASIC0.34□□□□□ -2.36
NOTCH3Q9UM47 PSMC1P5-201ENST00000512850 177 ntBASIC0.34□□□□□ -2.36
NOTCH3Q9UM47 MIR8068-201ENST00000618032 68 ntBASIC0.34□□□□□ -2.36
NOTCH3Q9UM47 MIR101-1-201ENST00000362265 75 ntBASIC0.33□□□□□ -2.36
NOTCH3Q9UM47 RNA5SP128-201ENST00000365305 116 ntBASIC0.33□□□□□ -2.36
NOTCH3Q9UM47 MTRNR2L9-201ENST00000622562 75 ntBASIC0.33□□□□□ -2.36
NOTCH3Q9UM47 RNU6-1204P-201ENST00000363948 107 ntBASIC0.33□□□□□ -2.36
NOTCH3Q9UM47 AC104408.1-201ENST00000605241 170 ntBASIC0.33□□□□□ -2.36
NOTCH3Q9UM47 RNU6-822P-201ENST00000362707 106 ntBASIC0.32□□□□□ -2.36
NOTCH3Q9UM47 Y_RNA.69-201ENST00000362885 109 ntBASIC0.32□□□□□ -2.36
NOTCH3Q9UM47 SNORD44.1-201ENST00000363202 61 ntBASIC0.32□□□□□ -2.36
NOTCH3Q9UM47 RNU6-598P-201ENST00000364017 105 ntBASIC0.32□□□□□ -2.36
NOTCH3Q9UM47 MIR548H2-201ENST00000408874 88 ntBASIC0.32□□□□□ -2.36
NOTCH3Q9UM47 AL451105.1-201ENST00000450005 189 ntBASIC0.32□□□□□ -2.36
NOTCH3Q9UM47 SNORD63.2-201ENST00000516303 64 ntBASIC0.32□□□□□ -2.36
NOTCH3Q9UM47 CR383656.4-201ENST00000546909 122 ntBASIC0.32□□□□□ -2.36
NOTCH3Q9UM47 RNU6-455P-201ENST00000384681 107 ntBASIC0.32□□□□□ -2.36
NOTCH3Q9UM47 SNORA62.4-201ENST00000365504 151 ntBASIC0.31□□□□□ -2.36
NOTCH3Q9UM47 MIR548Q-201ENST00000408404 100 ntBASIC0.31□□□□□ -2.36
NOTCH3Q9UM47 RNU6-1267P-201ENST00000410747 107 ntBASIC0.31□□□□□ -2.36
NOTCH3Q9UM47 RNU6-1174P-201ENST00000517278 101 ntBASIC0.31□□□□□ -2.36
NOTCH3Q9UM47 MIR4320-201ENST00000636981 65 ntBASIC0.31□□□□□ -2.36
NOTCH3Q9UM47 SNORD56B-201ENST00000384713 71 ntBASIC0.31□□□□□ -2.36
NOTCH3Q9UM47 Y_RNA.206-201ENST00000364136 102 ntBASIC0.3□□□□□ -2.36
NOTCH3Q9UM47 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
NOTCH3Q9UM47 RNY4-201ENST00000516507 96 ntBASIC0.3□□□□□ -2.36
NOTCH3Q9UM47 MIR5704-201ENST00000584029 77 ntBASIC0.3□□□□□ -2.36
NOTCH3Q9UM47 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
NOTCH3Q9UM47 RNU7-159P-201ENST00000459284 62 ntBASIC0.29□□□□□ -2.36
NOTCH3Q9UM47 AP002795.1-201ENST00000534879 84 ntBASIC0.29□□□□□ -2.36
NOTCH3Q9UM47 MIR5190-201ENST00000581537 80 ntBASIC0.29□□□□□ -2.36
NOTCH3Q9UM47 Y_RNA.181-201ENST00000363872 101 ntBASIC0.29□□□□□ -2.36
NOTCH3Q9UM47 RNU6-900P-201ENST00000384498 102 ntBASIC0.29□□□□□ -2.36
NOTCH3Q9UM47 RNU6-901P-201ENST00000384593 106 ntBASIC0.29□□□□□ -2.36
NOTCH3Q9UM47 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
NOTCH3Q9UM47 AC114755.3-201ENST00000481111 251 ntBASIC0.29□□□□□ -2.36
NOTCH3Q9UM47 RNU6-119P-201ENST00000364882 107 ntBASIC0.28□□□□□ -2.36
NOTCH3Q9UM47 MIR4645-201ENST00000583158 77 ntBASIC0.28□□□□□ -2.36
NOTCH3Q9UM47 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC0.28□□□□□ -2.36
NOTCH3Q9UM47 MIR124-2-201ENST00000385081 109 ntBASIC0.27□□□□□ -2.37
NOTCH3Q9UM47 Y_RNA.613-201ENST00000410726 97 ntBASIC0.27□□□□□ -2.37
NOTCH3Q9UM47 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
NOTCH3Q9UM47 MIR4441-201ENST00000582623 100 ntBASIC0.27□□□□□ -2.37
NOTCH3Q9UM47 MIR4426-201ENST00000640330 63 ntBASIC0.27□□□□□ -2.37
NOTCH3Q9UM47 SNORD114-31-201ENST00000363219 75 ntBASIC0.27□□□□□ -2.37
NOTCH3Q9UM47 RNU6-530P-201ENST00000391180 107 ntBASIC0.27□□□□□ -2.37
NOTCH3Q9UM47 RNA5SP163-201ENST00000410304 99 ntBASIC0.27□□□□□ -2.37
NOTCH3Q9UM47 Y_RNA.616-201ENST00000410835 95 ntBASIC0.27□□□□□ -2.37
NOTCH3Q9UM47 RNU6-180P-201ENST00000516697 61 ntBASIC0.27□□□□□ -2.37
NOTCH3Q9UM47 RNU6-361P-201ENST00000364454 107 ntBASIC0.26□□□□□ -2.37
NOTCH3Q9UM47 RNU6-59P-201ENST00000384787 107 ntBASIC0.26□□□□□ -2.37
NOTCH3Q9UM47 MIR892B-201ENST00000401279 77 ntBASIC0.26□□□□□ -2.37
NOTCH3Q9UM47 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
NOTCH3Q9UM47 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
NOTCH3Q9UM47 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms