Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.64□□□□□ -2.67
POLR1EQ9GZS1 MIR496-201ENST00000385226 102 ntBASIC-1.64□□□□□ -2.67
POLR1EQ9GZS1 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 SNORD45.1-201ENST00000363181 77 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 MIR488-201ENST00000365739 83 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.65□□□□□ -2.67
POLR1EQ9GZS1 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.66□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.66□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.66□□□□□ -2.68
POLR1EQ9GZS1 RNU6-458P-201ENST00000384179 107 ntBASIC-1.66□□□□□ -2.68
POLR1EQ9GZS1 RNU6-695P-201ENST00000391157 104 ntBASIC-1.66□□□□□ -2.68
POLR1EQ9GZS1 U6.58-201ENST00000613107 107 ntBASIC-1.66□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.67□□□□□ -2.68
POLR1EQ9GZS1 RNU6-129P-201ENST00000391022 107 ntBASIC-1.67□□□□□ -2.68
POLR1EQ9GZS1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.67□□□□□ -2.68
POLR1EQ9GZS1 MIR3910-1-201ENST00000580936 111 ntBASIC-1.67□□□□□ -2.68
POLR1EQ9GZS1 RNU6-119P-201ENST00000364882 107 ntBASIC-1.68□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.68□□□□□ -2.68
POLR1EQ9GZS1 AC120024.2-201ENST00000576526 175 ntBASIC-1.68□□□□□ -2.68
POLR1EQ9GZS1 RNU6-640P-201ENST00000363693 105 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 RNU6-755P-201ENST00000364400 103 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 RNU6-587P-201ENST00000391282 106 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 MIR4484-201ENST00000582855 83 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 MIR3123-201ENST00000583417 75 ntBASIC-1.69□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.7□□□□□ -2.68
POLR1EQ9GZS1 RNU6-118P-201ENST00000516552 102 ntBASIC-1.7□□□□□ -2.68
POLR1EQ9GZS1 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.71□□□□□ -2.68
POLR1EQ9GZS1 RNU6-675P-201ENST00000384236 104 ntBASIC-1.71□□□□□ -2.68
POLR1EQ9GZS1 RNU6-598P-201ENST00000364017 105 ntBASIC-1.72□□□□□ -2.68
POLR1EQ9GZS1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.72□□□□□ -2.68
POLR1EQ9GZS1 RNU6-980P-201ENST00000516925 103 ntBASIC-1.72□□□□□ -2.68
POLR1EQ9GZS1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.72□□□□□ -2.68
POLR1EQ9GZS1 U4.4-201ENST00000620626 117 ntBASIC-1.72□□□□□ -2.68
POLR1EQ9GZS1 U2.18-201ENST00000622185 84 ntBASIC-1.72□□□□□ -2.68
POLR1EQ9GZS1 RNU6-698P-201ENST00000363523 107 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 RNU6-34P-201ENST00000364874 107 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 RNU6-696P-201ENST00000390834 107 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 MIR548AM-201ENST00000584298 74 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 MIR664B-201ENST00000626756 61 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 AC006160.2-201ENST00000637708 154 ntBASIC-1.73□□□□□ -2.69
POLR1EQ9GZS1 RNU6-32P-201ENST00000383948 107 ntBASIC-1.74□□□□□ -2.69
POLR1EQ9GZS1 RNU6-13P-201ENST00000384248 107 ntBASIC-1.74□□□□□ -2.69
POLR1EQ9GZS1 RNU6-12P-201ENST00000384604 107 ntBASIC-1.74□□□□□ -2.69
POLR1EQ9GZS1 RNU6-41P-201ENST00000384741 107 ntBASIC-1.74□□□□□ -2.69
POLR1EQ9GZS1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.74□□□□□ -2.69
POLR1EQ9GZS1 RNU6-844P-201ENST00000517175 102 ntBASIC-1.74□□□□□ -2.69
POLR1EQ9GZS1 SNORA63.4-201ENST00000362763 126 ntBASIC-1.75□□□□□ -2.69
POLR1EQ9GZS1 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.75□□□□□ -2.69
POLR1EQ9GZS1 MIR1297-201ENST00000637311 77 ntBASIC-1.75□□□□□ -2.69
POLR1EQ9GZS1 SNORD115-31-201ENST00000365318 82 ntBASIC-1.76□□□□□ -2.69
POLR1EQ9GZS1 SNORD113-1-201ENST00000365321 69 ntBASIC-1.76□□□□□ -2.69
POLR1EQ9GZS1 RNU6-147P-201ENST00000383983 107 ntBASIC-1.76□□□□□ -2.69
POLR1EQ9GZS1 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.77□□□□□ -2.69
POLR1EQ9GZS1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
POLR1EQ9GZS1 MIR548V-201ENST00000584165 80 ntBASIC-1.77□□□□□ -2.69
POLR1EQ9GZS1 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.78□□□□□ -2.69
POLR1EQ9GZS1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.78□□□□□ -2.69
POLR1EQ9GZS1 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.78□□□□□ -2.69
POLR1EQ9GZS1 AC013734.1-201ENST00000619329 111 ntBASIC-1.78□□□□□ -2.69
POLR1EQ9GZS1 MIR429-201ENST00000362106 83 ntBASIC-1.79□□□□□ -2.7
POLR1EQ9GZS1 MIR630-201ENST00000384957 97 ntBASIC-1.79□□□□□ -2.7
POLR1EQ9GZS1 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.79□□□□□ -2.7
POLR1EQ9GZS1 MTND4LP1-201ENST00000446263 157 ntBASIC-1.79□□□□□ -2.7
POLR1EQ9GZS1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.79□□□□□ -2.7
POLR1EQ9GZS1 MIR3170-201ENST00000582699 77 ntBASIC-1.79□□□□□ -2.7
POLR1EQ9GZS1 SNORD113.1-201ENST00000363280 73 ntBASIC-1.81□□□□□ -2.7
POLR1EQ9GZS1 RNU6-380P-201ENST00000410207 107 ntBASIC-1.81□□□□□ -2.7
POLR1EQ9GZS1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.81□□□□□ -2.7
POLR1EQ9GZS1 MIR664A-201ENST00000626086 82 ntBASIC-1.81□□□□□ -2.7
POLR1EQ9GZS1 U6.97-201ENST00000636904 101 ntBASIC-1.81□□□□□ -2.7
POLR1EQ9GZS1 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.82□□□□□ -2.7
POLR1EQ9GZS1 MIR8053-201ENST00000613344 75 ntBASIC-1.82□□□□□ -2.7
POLR1EQ9GZS1 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 RNU6-668P-201ENST00000364180 107 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 SNORD45A-201ENST00000384512 84 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 AL606753.1-201ENST00000427435 87 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 snoU13.10-201ENST00000459301 103 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 MIR548W-201ENST00000581970 74 ntBASIC-1.83□□□□□ -2.7
POLR1EQ9GZS1 RNA5SP93-201ENST00000362525 114 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 RNA5SP405-201ENST00000363059 114 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 RNA5SP215-201ENST00000363440 122 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 RNU6-194P-201ENST00000363862 105 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 RNU6-215P-201ENST00000365169 102 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 SNORD20-201ENST00000384550 80 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 SNORD113-2-201ENST00000391082 72 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 AC005520.4-201ENST00000604337 90 ntBASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.84□□□□□ -2.7
POLR1EQ9GZS1 RNU6-315P-201ENST00000362666 107 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms