Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 Y_RNA.423-201ENST00000384057 113 ntBASIC0.53□□□□□ -2.32
SALL3Q9BXA9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.52□□□□□ -2.33
SALL3Q9BXA9 SNORD114-29-201ENST00000364819 70 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 MIR106A-201ENST00000384870 81 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 MIR548H2-201ENST00000408874 88 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 MIR1468-201ENST00000410600 86 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 RNU7-55P-201ENST00000459426 62 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 AC114755.3-201ENST00000481111 251 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 RNA5SP67-201ENST00000516422 131 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 MIR499B-201ENST00000636498 73 ntBASIC0.52□□□□□ -2.33
SALL3Q9BXA9 MIR429-201ENST00000362106 83 ntBASIC0.51□□□□□ -2.33
SALL3Q9BXA9 RNU6-361P-201ENST00000364454 107 ntBASIC0.51□□□□□ -2.33
SALL3Q9BXA9 SNORD2-201ENST00000459163 69 ntBASIC0.51□□□□□ -2.33
SALL3Q9BXA9 MIR4514-201ENST00000581410 57 ntBASIC0.51□□□□□ -2.33
SALL3Q9BXA9 AC013734.1-201ENST00000619329 111 ntBASIC0.51□□□□□ -2.33
SALL3Q9BXA9 RNU6-1091P-201ENST00000363945 107 ntBASIC0.5□□□□□ -2.33
SALL3Q9BXA9 Y_RNA.320-201ENST00000365144 102 ntBASIC0.5□□□□□ -2.33
SALL3Q9BXA9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.5□□□□□ -2.33
SALL3Q9BXA9 Y_RNA.382-201ENST00000365672 114 ntBASIC0.49□□□□□ -2.33
SALL3Q9BXA9 SNORD56B-201ENST00000384713 71 ntBASIC0.49□□□□□ -2.33
SALL3Q9BXA9 Y_RNA.613-201ENST00000410726 97 ntBASIC0.49□□□□□ -2.33
SALL3Q9BXA9 AC096531.1-201ENST00000419107 107 ntBASIC0.49□□□□□ -2.33
SALL3Q9BXA9 AC104408.1-201ENST00000605241 170 ntBASIC0.49□□□□□ -2.33
SALL3Q9BXA9 MIR4317-201ENST00000637586 65 ntBASIC0.49□□□□□ -2.33
SALL3Q9BXA9 Y_RNA.134-201ENST00000363435 105 ntBASIC0.48□□□□□ -2.33
SALL3Q9BXA9 RNA5SP128-201ENST00000365305 116 ntBASIC0.48□□□□□ -2.33
SALL3Q9BXA9 AL391099.1-201ENST00000624635 187 ntBASIC0.48□□□□□ -2.33
SALL3Q9BXA9 SNORA27.2-201ENST00000363365 126 ntBASIC0.47□□□□□ -2.33
SALL3Q9BXA9 RNU6-1233P-201ENST00000362922 102 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 RNU6-973P-201ENST00000364690 107 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 MIR124-2-201ENST00000385081 109 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 MIR760-201ENST00000390220 80 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 RNU6-1111P-201ENST00000391118 107 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 SCARNA11.2-201ENST00000517183 154 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 AC084368.1-201ENST00000620935 65 ntBASIC0.46□□□□□ -2.34
SALL3Q9BXA9 SNORD45.2-201ENST00000363552 72 ntBASIC0.45□□□□□ -2.34
SALL3Q9BXA9 RNU6-563P-201ENST00000364872 108 ntBASIC0.45□□□□□ -2.34
SALL3Q9BXA9 SNORA17.4-201ENST00000391287 132 ntBASIC0.45□□□□□ -2.34
SALL3Q9BXA9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
SALL3Q9BXA9 snoU13.19-201ENST00000459148 104 ntBASIC0.45□□□□□ -2.34
SALL3Q9BXA9 MIR6759-201ENST00000638110 65 ntBASIC0.45□□□□□ -2.34
SALL3Q9BXA9 AC090625.1-201ENST00000357130 210 ntBASIC0.44□□□□□ -2.34
SALL3Q9BXA9 MIR655-201ENST00000362159 97 ntBASIC0.44□□□□□ -2.34
SALL3Q9BXA9 RNU6-1169P-201ENST00000363537 103 ntBASIC0.44□□□□□ -2.34
SALL3Q9BXA9 Y_RNA.519-201ENST00000384553 102 ntBASIC0.44□□□□□ -2.34
SALL3Q9BXA9 MIR548N-201ENST00000408742 75 ntBASIC0.44□□□□□ -2.34
SALL3Q9BXA9 RPL35AP4-201ENST00000412007 102 ntBASIC0.44□□□□□ -2.34
SALL3Q9BXA9 MIR103A1-201ENST00000362165 78 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 Y_RNA.223-201ENST00000364290 113 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 RNA5SP224-201ENST00000365069 126 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 Y_RNA.321-201ENST00000365149 102 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 MIR548Q-201ENST00000408404 100 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 Y_RNA.699-201ENST00000516803 93 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 MIR4280-201ENST00000582178 76 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.43□□□□□ -2.34
SALL3Q9BXA9 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
SALL3Q9BXA9 RNU6-127P-201ENST00000390897 107 ntBASIC0.42□□□□□ -2.34
SALL3Q9BXA9 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
SALL3Q9BXA9 MIR548AJ2-201ENST00000408539 92 ntBASIC0.41□□□□□ -2.34
SALL3Q9BXA9 AC244250.2-201ENST00000418731 148 ntBASIC0.41□□□□□ -2.34
SALL3Q9BXA9 MIR4636-201ENST00000582271 80 ntBASIC0.41□□□□□ -2.34
SALL3Q9BXA9 RNU6-815P-201ENST00000384080 113 ntBASIC0.4□□□□□ -2.34
SALL3Q9BXA9 RNU6-900P-201ENST00000384498 102 ntBASIC0.4□□□□□ -2.34
SALL3Q9BXA9 RNU6-455P-201ENST00000384681 107 ntBASIC0.4□□□□□ -2.34
SALL3Q9BXA9 MIR6854-201ENST00000614935 69 ntBASIC0.4□□□□□ -2.34
SALL3Q9BXA9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.4□□□□□ -2.35
SALL3Q9BXA9 RNU7-129P-201ENST00000516128 62 ntBASIC0.39□□□□□ -2.35
SALL3Q9BXA9 MIR5589-201ENST00000579442 60 ntBASIC0.39□□□□□ -2.35
SALL3Q9BXA9 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.39□□□□□ -2.35
SALL3Q9BXA9 snoR1.1-201ENST00000628177 80 ntBASIC0.39□□□□□ -2.35
SALL3Q9BXA9 MIR5683-201ENST00000636514 76 ntBASIC0.39□□□□□ -2.35
SALL3Q9BXA9 SNORA62.4-201ENST00000365504 151 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 SNORD115.2-201ENST00000391126 59 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 Z95118.1-201ENST00000421372 247 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 SNORD38.3-201ENST00000516599 73 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 RNA5SP169-201ENST00000517268 117 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.38□□□□□ -2.35
SALL3Q9BXA9 RNA5SP98-201ENST00000363158 137 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 RNU6-1133P-201ENST00000410963 100 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 U6.97-201ENST00000636904 101 ntBASIC0.38□□□□□ -2.35
SALL3Q9BXA9 RNA5SP26-201ENST00000362406 119 ntBASIC0.37□□□□□ -2.35
SALL3Q9BXA9 RNU6-79P-201ENST00000362511 107 ntBASIC0.37□□□□□ -2.35
SALL3Q9BXA9 RNU6-695P-201ENST00000391157 104 ntBASIC0.37□□□□□ -2.35
SALL3Q9BXA9 AC108740.1-201ENST00000498629 225 ntBASIC0.37□□□□□ -2.35
SALL3Q9BXA9 AC069113.3-201ENST00000521019 150 ntBASIC0.37□□□□□ -2.35
SALL3Q9BXA9 MIR6514-201ENST00000622549 70 ntBASIC0.37□□□□□ -2.35
SALL3Q9BXA9 Y_RNA.260-201ENST00000364628 101 ntBASIC0.36□□□□□ -2.35
SALL3Q9BXA9 RNU6-30P-201ENST00000384561 107 ntBASIC0.36□□□□□ -2.35
SALL3Q9BXA9 SNORA26.4-201ENST00000391188 123 ntBASIC0.36□□□□□ -2.35
SALL3Q9BXA9 RNU6-180P-201ENST00000516697 61 ntBASIC0.36□□□□□ -2.35
SALL3Q9BXA9 RNU6-836P-201ENST00000362920 107 ntBASIC0.35□□□□□ -2.35
SALL3Q9BXA9 RNU6-912P-201ENST00000363800 104 ntBASIC0.35□□□□□ -2.35
SALL3Q9BXA9 AC090616.4-201ENST00000448026 115 ntBASIC0.35□□□□□ -2.35
SALL3Q9BXA9 FTX_4.1-201ENST00000616291 147 ntBASIC0.35□□□□□ -2.35
SALL3Q9BXA9 Y_RNA.185-201ENST00000363894 100 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms