Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MIR630-201ENST00000384957 97 ntBASIC-1.08□□□□□ -2.58
RPAP1Q9BWH6 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
RPAP1Q9BWH6 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.08□□□□□ -2.58
RPAP1Q9BWH6 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.09□□□□□ -2.58
RPAP1Q9BWH6 MIR520D-201ENST00000385002 87 ntBASIC-1.09□□□□□ -2.58
RPAP1Q9BWH6 SNORD113-2-201ENST00000391082 72 ntBASIC-1.09□□□□□ -2.58
RPAP1Q9BWH6 MIR1207-201ENST00000408249 87 ntBASIC-1.09□□□□□ -2.58
RPAP1Q9BWH6 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.09□□□□□ -2.58
RPAP1Q9BWH6 U2.18-201ENST00000622185 84 ntBASIC-1.09□□□□□ -2.58
RPAP1Q9BWH6 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.1□□□□□ -2.59
RPAP1Q9BWH6 SNORD114-3-201ENST00000364969 75 ntBASIC-1.1□□□□□ -2.59
RPAP1Q9BWH6 RNU6-608P-201ENST00000383927 104 ntBASIC-1.1□□□□□ -2.59
RPAP1Q9BWH6 SNORD45A-201ENST00000384512 84 ntBASIC-1.1□□□□□ -2.59
RPAP1Q9BWH6 RNU6-630P-201ENST00000391258 106 ntBASIC-1.1□□□□□ -2.59
RPAP1Q9BWH6 RNU6-919P-201ENST00000516731 104 ntBASIC-1.1□□□□□ -2.59
RPAP1Q9BWH6 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.11□□□□□ -2.59
RPAP1Q9BWH6 RNU6-979P-201ENST00000383896 107 ntBASIC-1.11□□□□□ -2.59
RPAP1Q9BWH6 RNU6-44P-201ENST00000384045 107 ntBASIC-1.11□□□□□ -2.59
RPAP1Q9BWH6 MIR5588-201ENST00000581890 63 ntBASIC-1.11□□□□□ -2.59
RPAP1Q9BWH6 MIR6502-201ENST00000617296 76 ntBASIC-1.11□□□□□ -2.59
RPAP1Q9BWH6 RNU6-315P-201ENST00000362666 107 ntBASIC-1.12□□□□□ -2.59
RPAP1Q9BWH6 RNA5SP215-201ENST00000363440 122 ntBASIC-1.12□□□□□ -2.59
RPAP1Q9BWH6 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.12□□□□□ -2.59
RPAP1Q9BWH6 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.12□□□□□ -2.59
RPAP1Q9BWH6 MTND4LP1-201ENST00000446263 157 ntBASIC-1.12□□□□□ -2.59
RPAP1Q9BWH6 RNU6-668P-201ENST00000364180 107 ntBASIC-1.13□□□□□ -2.59
RPAP1Q9BWH6 SNORA41B-201ENST00000384785 128 ntBASIC-1.13□□□□□ -2.59
RPAP1Q9BWH6 RNA5SP89-201ENST00000410300 108 ntBASIC-1.13□□□□□ -2.59
RPAP1Q9BWH6 RNU6-168P-201ENST00000516189 101 ntBASIC-1.13□□□□□ -2.59
RPAP1Q9BWH6 RNU6-706P-201ENST00000517229 104 ntBASIC-1.13□□□□□ -2.59
RPAP1Q9BWH6 MIR8053-201ENST00000613344 75 ntBASIC-1.13□□□□□ -2.59
RPAP1Q9BWH6 IGLL4P-201ENST00000614590 133 ntBASIC-1.13□□□□□ -2.59
RPAP1Q9BWH6 RNY1P1-201ENST00000364372 112 ntBASIC-1.14□□□□□ -2.59
RPAP1Q9BWH6 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.15□□□□□ -2.59
RPAP1Q9BWH6 SNORD116-16-201ENST00000384533 92 ntBASIC-1.15□□□□□ -2.59
RPAP1Q9BWH6 AC138207.3-201ENST00000585289 166 ntBASIC-1.15□□□□□ -2.59
RPAP1Q9BWH6 MIR365A-201ENST00000362260 87 ntBASIC-1.16□□□□□ -2.59
RPAP1Q9BWH6 SNORD116-24-201ENST00000384549 92 ntBASIC-1.16□□□□□ -2.59
RPAP1Q9BWH6 RNU6-380P-201ENST00000410207 107 ntBASIC-1.16□□□□□ -2.59
RPAP1Q9BWH6 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.16□□□□□ -2.59
RPAP1Q9BWH6 RNU7-171P-201ENST00000459581 62 ntBASIC-1.16□□□□□ -2.59
RPAP1Q9BWH6 MIR429-201ENST00000362106 83 ntBASIC-1.17□□□□□ -2.6
RPAP1Q9BWH6 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.17□□□□□ -2.6
RPAP1Q9BWH6 MIR1285-2-201ENST00000408311 88 ntBASIC-1.17□□□□□ -2.6
RPAP1Q9BWH6 MIR4441-201ENST00000582623 100 ntBASIC-1.17□□□□□ -2.6
RPAP1Q9BWH6 MIR3170-201ENST00000582699 77 ntBASIC-1.17□□□□□ -2.6
RPAP1Q9BWH6 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.18□□□□□ -2.6
RPAP1Q9BWH6 RNU6-79P-201ENST00000362511 107 ntBASIC-1.18□□□□□ -2.6
RPAP1Q9BWH6 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.18□□□□□ -2.6
RPAP1Q9BWH6 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.18□□□□□ -2.6
RPAP1Q9BWH6 MIR4520-1-201ENST00000582609 70 ntBASIC-1.18□□□□□ -2.6
RPAP1Q9BWH6 MIR4712-201ENST00000583750 82 ntBASIC-1.18□□□□□ -2.6
RPAP1Q9BWH6 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.18□□□□□ -2.6
RPAP1Q9BWH6 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.19□□□□□ -2.6
RPAP1Q9BWH6 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.19□□□□□ -2.6
RPAP1Q9BWH6 RNU6-258P-201ENST00000390884 101 ntBASIC-1.19□□□□□ -2.6
RPAP1Q9BWH6 AL603908.1-201ENST00000406098 201 ntBASIC-1.19□□□□□ -2.6
RPAP1Q9BWH6 AC018880.2-201ENST00000414265 201 ntBASIC-1.19□□□□□ -2.6
RPAP1Q9BWH6 MIR1245B-201ENST00000636115 69 ntBASIC-1.19□□□□□ -2.6
RPAP1Q9BWH6 SNORD1B-201ENST00000363091 84 ntBASIC-1.2□□□□□ -2.6
RPAP1Q9BWH6 SNORD115-31-201ENST00000365318 82 ntBASIC-1.2□□□□□ -2.6
RPAP1Q9BWH6 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.2□□□□□ -2.6
RPAP1Q9BWH6 MIR5591-201ENST00000578248 65 ntBASIC-1.2□□□□□ -2.6
RPAP1Q9BWH6 MIR548AA1-201ENST00000384971 97 ntBASIC-1.21□□□□□ -2.6
RPAP1Q9BWH6 RNU6-70P-201ENST00000516438 60 ntBASIC-1.21□□□□□ -2.6
RPAP1Q9BWH6 RNU6-406P-201ENST00000516470 107 ntBASIC-1.21□□□□□ -2.6
RPAP1Q9BWH6 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.21□□□□□ -2.6
RPAP1Q9BWH6 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.21□□□□□ -2.6
RPAP1Q9BWH6 RNY4P30-201ENST00000410216 95 ntBASIC-1.21□□□□□ -2.6
RPAP1Q9BWH6 HLA-S-202ENST00000425174 53 ntBASIC-1.21□□□□□ -2.6
RPAP1Q9BWH6 MIR3134-201ENST00000579433 74 ntBASIC-1.21□□□□□ -2.6
RPAP1Q9BWH6 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.21□□□□□ -2.6
RPAP1Q9BWH6 RNU6-789P-201ENST00000517105 102 ntBASIC-1.22□□□□□ -2.61
RPAP1Q9BWH6 MIR4770-201ENST00000579149 58 ntBASIC-1.22□□□□□ -2.61
RPAP1Q9BWH6 MIR494-201ENST00000349529 81 ntBASIC-1.23□□□□□ -2.61
RPAP1Q9BWH6 RNU6-787P-201ENST00000384032 107 ntBASIC-1.23□□□□□ -2.61
RPAP1Q9BWH6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.23□□□□□ -2.61
RPAP1Q9BWH6 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.23□□□□□ -2.61
RPAP1Q9BWH6 RNU6-153P-201ENST00000364422 104 ntBASIC-1.24□□□□□ -2.61
RPAP1Q9BWH6 MIR154-201ENST00000385243 84 ntBASIC-1.24□□□□□ -2.61
RPAP1Q9BWH6 RNU6-687P-201ENST00000516443 89 ntBASIC-1.24□□□□□ -2.61
RPAP1Q9BWH6 RNU7-151P-201ENST00000516930 53 ntBASIC-1.24□□□□□ -2.61
RPAP1Q9BWH6 RNU6-563P-201ENST00000364872 108 ntBASIC-1.25□□□□□ -2.61
RPAP1Q9BWH6 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.25□□□□□ -2.61
RPAP1Q9BWH6 AC120024.2-201ENST00000576526 175 ntBASIC-1.25□□□□□ -2.61
RPAP1Q9BWH6 MIR4666B-201ENST00000578142 81 ntBASIC-1.25□□□□□ -2.61
RPAP1Q9BWH6 RNA5SP173-201ENST00000364857 136 ntBASIC-1.26□□□□□ -2.61
RPAP1Q9BWH6 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.26□□□□□ -2.61
RPAP1Q9BWH6 MIR579-201ENST00000385221 98 ntBASIC-1.26□□□□□ -2.61
RPAP1Q9BWH6 RNU6-400P-201ENST00000391173 106 ntBASIC-1.26□□□□□ -2.61
RPAP1Q9BWH6 MIR23C-201ENST00000579846 100 ntBASIC-1.26□□□□□ -2.61
RPAP1Q9BWH6 MIR7978-201ENST00000636158 59 ntBASIC-1.26□□□□□ -2.61
RPAP1Q9BWH6 RNU6-895P-201ENST00000384125 103 ntBASIC-1.27□□□□□ -2.61
RPAP1Q9BWH6 RNA5SP86-201ENST00000390869 98 ntBASIC-1.27□□□□□ -2.61
RPAP1Q9BWH6 RNU6-172P-201ENST00000411000 93 ntBASIC-1.27□□□□□ -2.61
RPAP1Q9BWH6 MIR1246-201ENST00000636535 73 ntBASIC-1.27□□□□□ -2.61
RPAP1Q9BWH6 RNY4P27-201ENST00000363341 96 ntBASIC-1.28□□□□□ -2.61
RPAP1Q9BWH6 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.28□□□□□ -2.61
RPAP1Q9BWH6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
RPAP1Q9BWH6 RNU6-294P-201ENST00000364999 102 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms