Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MTATP8P2-201ENST00000435212 202 ntBASIC-3.11□□□□□ -2.91
AP1S3Q96PC3 AC093729.1-201ENST00000513074 128 ntBASIC-3.11□□□□□ -2.91
AP1S3Q96PC3 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.12□□□□□ -2.91
AP1S3Q96PC3 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.12□□□□□ -2.91
AP1S3Q96PC3 MIR548N-201ENST00000408742 75 ntBASIC-3.12□□□□□ -2.91
AP1S3Q96PC3 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.12□□□□□ -2.91
AP1S3Q96PC3 SNORD113-3-201ENST00000364830 72 ntBASIC-3.13□□□□□ -2.91
AP1S3Q96PC3 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.13□□□□□ -2.91
AP1S3Q96PC3 MTND5P41-201ENST00000517498 206 ntBASIC-3.13□□□□□ -2.91
AP1S3Q96PC3 RNU6-686P-201ENST00000364839 107 ntBASIC-3.14□□□□□ -2.91
AP1S3Q96PC3 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.14□□□□□ -2.91
AP1S3Q96PC3 MIR4484-201ENST00000582855 83 ntBASIC-3.14□□□□□ -2.91
AP1S3Q96PC3 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.15□□□□□ -2.91
AP1S3Q96PC3 Y_RNA.290-201ENST00000364879 114 ntBASIC-3.15□□□□□ -2.91
AP1S3Q96PC3 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.15□□□□□ -2.91
AP1S3Q96PC3 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.15□□□□□ -2.91
AP1S3Q96PC3 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.15□□□□□ -2.91
AP1S3Q96PC3 SNORD60-201ENST00000383903 83 ntBASIC-3.15□□□□□ -2.91
AP1S3Q96PC3 RNU6-649P-201ENST00000384463 107 ntBASIC-3.15□□□□□ -2.91
AP1S3Q96PC3 MIRLET7A1-201ENST00000362295 80 ntBASIC-3.16□□□□□ -2.92
AP1S3Q96PC3 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.16□□□□□ -2.92
AP1S3Q96PC3 RNA5SP173-201ENST00000364857 136 ntBASIC-3.16□□□□□ -2.92
AP1S3Q96PC3 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.16□□□□□ -2.92
AP1S3Q96PC3 RNU6-257P-201ENST00000410238 98 ntBASIC-3.16□□□□□ -2.92
AP1S3Q96PC3 MIR4668-201ENST00000582284 70 ntBASIC-3.16□□□□□ -2.92
AP1S3Q96PC3 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.17□□□□□ -2.92
AP1S3Q96PC3 SNORD45A-201ENST00000384512 84 ntBASIC-3.17□□□□□ -2.92
AP1S3Q96PC3 RNU6-659P-201ENST00000516454 104 ntBASIC-3.17□□□□□ -2.92
AP1S3Q96PC3 AC008737.2-201ENST00000599446 118 ntBASIC-3.17□□□□□ -2.92
AP1S3Q96PC3 U6.95-201ENST00000636931 70 ntBASIC-3.17□□□□□ -2.92
AP1S3Q96PC3 SNORA40-201ENST00000388090 126 ntBASIC-3.18□□□□□ -2.92
AP1S3Q96PC3 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.19□□□□□ -2.92
AP1S3Q96PC3 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.19□□□□□ -2.92
AP1S3Q96PC3 RNU6-106P-201ENST00000384405 107 ntBASIC-3.19□□□□□ -2.92
AP1S3Q96PC3 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.19□□□□□ -2.92
AP1S3Q96PC3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.19□□□□□ -2.92
AP1S3Q96PC3 MTCYBP9-201ENST00000431021 303 ntBASIC-3.19□□□□□ -2.92
AP1S3Q96PC3 RNU6-971P-201ENST00000516920 106 ntBASIC-3.19□□□□□ -2.92
AP1S3Q96PC3 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.2□□□□□ -2.92
AP1S3Q96PC3 AC004792.1-201ENST00000614523 137 ntBASIC-3.2□□□□□ -2.92
AP1S3Q96PC3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.2□□□□□ -2.92
AP1S3Q96PC3 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.21□□□□□ -2.92
AP1S3Q96PC3 SNORA17.4-201ENST00000391287 132 ntBASIC-3.21□□□□□ -2.92
AP1S3Q96PC3 AP001318.4-201ENST00000616637 121 ntBASIC-3.21□□□□□ -2.92
AP1S3Q96PC3 MIR664A-201ENST00000626086 82 ntBASIC-3.21□□□□□ -2.92
AP1S3Q96PC3 RNU6-912P-201ENST00000363800 104 ntBASIC-3.22□□□□□ -2.92
AP1S3Q96PC3 SNORD116-21-201ENST00000384507 92 ntBASIC-3.22□□□□□ -2.92
AP1S3Q96PC3 SNORA19-201ENST00000384737 128 ntBASIC-3.22□□□□□ -2.92
AP1S3Q96PC3 RNU6-402P-201ENST00000410678 103 ntBASIC-3.22□□□□□ -2.92
AP1S3Q96PC3 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.22□□□□□ -2.92
AP1S3Q96PC3 MIR8053-201ENST00000613344 75 ntBASIC-3.22□□□□□ -2.92
AP1S3Q96PC3 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.22□□□□□ -2.92
AP1S3Q96PC3 RNU6-497P-201ENST00000365316 104 ntBASIC-3.23□□□□□ -2.93
AP1S3Q96PC3 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.23□□□□□ -2.93
AP1S3Q96PC3 RNU6-129P-201ENST00000391022 107 ntBASIC-3.23□□□□□ -2.93
AP1S3Q96PC3 RNU6-68P-201ENST00000516576 104 ntBASIC-3.23□□□□□ -2.93
AP1S3Q96PC3 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.23□□□□□ -2.93
AP1S3Q96PC3 AC044792.1-201ENST00000593294 196 ntBASIC-3.23□□□□□ -2.93
AP1S3Q96PC3 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.23□□□□□ -2.93
AP1S3Q96PC3 RNU6-230P-201ENST00000362457 104 ntBASIC-3.24□□□□□ -2.93
AP1S3Q96PC3 RNY4P7-201ENST00000364600 96 ntBASIC-3.24□□□□□ -2.93
AP1S3Q96PC3 MIR1302-5-201ENST00000408164 150 ntBASIC-3.24□□□□□ -2.93
AP1S3Q96PC3 RNU6-361P-201ENST00000364454 107 ntBASIC-3.25□□□□□ -2.93
AP1S3Q96PC3 RNU7-160P-201ENST00000516660 62 ntBASIC-3.25□□□□□ -2.93
AP1S3Q96PC3 RNU6-267P-201ENST00000516714 103 ntBASIC-3.25□□□□□ -2.93
AP1S3Q96PC3 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.25□□□□□ -2.93
AP1S3Q96PC3 MIR606-201ENST00000384851 96 ntBASIC-3.26□□□□□ -2.93
AP1S3Q96PC3 RNU6-554P-201ENST00000410466 106 ntBASIC-3.26□□□□□ -2.93
AP1S3Q96PC3 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.27□□□□□ -2.93
AP1S3Q96PC3 RNU6-219P-201ENST00000364728 107 ntBASIC-3.27□□□□□ -2.93
AP1S3Q96PC3 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.27□□□□□ -2.93
AP1S3Q96PC3 RNU6-530P-201ENST00000391180 107 ntBASIC-3.27□□□□□ -2.93
AP1S3Q96PC3 MIR548BB-201ENST00000626714 66 ntBASIC-3.27□□□□□ -2.93
AP1S3Q96PC3 SNORA63.4-201ENST00000362763 126 ntBASIC-3.28□□□□□ -2.93
AP1S3Q96PC3 RNU6-200P-201ENST00000364743 107 ntBASIC-3.28□□□□□ -2.93
AP1S3Q96PC3 RNU6-828P-201ENST00000364876 107 ntBASIC-3.28□□□□□ -2.93
AP1S3Q96PC3 RNU6-834P-201ENST00000362367 110 ntBASIC-3.29□□□□□ -2.94
AP1S3Q96PC3 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.29□□□□□ -2.94
AP1S3Q96PC3 MIR1297-201ENST00000637311 77 ntBASIC-3.29□□□□□ -2.94
AP1S3Q96PC3 Y_RNA.218-201ENST00000364218 104 ntBASIC-3.3□□□□□ -2.94
AP1S3Q96PC3 RNU6-755P-201ENST00000364400 103 ntBASIC-3.3□□□□□ -2.94
AP1S3Q96PC3 SNORD116-24-201ENST00000384549 92 ntBASIC-3.3□□□□□ -2.94
AP1S3Q96PC3 MIR1302-3-201ENST00000408128 138 ntBASIC-3.3□□□□□ -2.94
AP1S3Q96PC3 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.3□□□□□ -2.94
AP1S3Q96PC3 RNU6-810P-201ENST00000364001 107 ntBASIC-3.31□□□□□ -2.94
AP1S3Q96PC3 RNU6-789P-201ENST00000517105 102 ntBASIC-3.32□□□□□ -2.94
AP1S3Q96PC3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-3.34□□□□□ -2.94
AP1S3Q96PC3 MIR7110-201ENST00000612638 86 ntBASIC-3.34□□□□□ -2.94
AP1S3Q96PC3 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.35□□□□□ -2.95
AP1S3Q96PC3 RNU6-738P-201ENST00000384531 106 ntBASIC-3.35□□□□□ -2.95
AP1S3Q96PC3 MIR379-201ENST00000362218 67 ntBASIC-3.36□□□□□ -2.95
AP1S3Q96PC3 Y_RNA.193-201ENST00000363979 102 ntBASIC-3.36□□□□□ -2.95
AP1S3Q96PC3 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.36□□□□□ -2.95
AP1S3Q96PC3 SNORD116-22-201ENST00000384430 92 ntBASIC-3.36□□□□□ -2.95
AP1S3Q96PC3 RNU6-907P-201ENST00000390924 102 ntBASIC-3.36□□□□□ -2.95
AP1S3Q96PC3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.37□□□□□ -2.95
AP1S3Q96PC3 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.37□□□□□ -2.95
AP1S3Q96PC3 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.38□□□□□ -2.95
AP1S3Q96PC3 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.38□□□□□ -2.95
AP1S3Q96PC3 RNU7-200P-201ENST00000516105 62 ntBASIC-3.38□□□□□ -2.95
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms