Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.25□□□□□ -2.61
RPUSD3Q6P087 RNU6-194P-201ENST00000363862 105 ntBASIC-1.26□□□□□ -2.61
RPUSD3Q6P087 MIR548C-201ENST00000384815 97 ntBASIC-1.26□□□□□ -2.61
RPUSD3Q6P087 MIR548AA1-201ENST00000384971 97 ntBASIC-1.26□□□□□ -2.61
RPUSD3Q6P087 MIR590-201ENST00000385008 97 ntBASIC-1.26□□□□□ -2.61
RPUSD3Q6P087 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.26□□□□□ -2.61
RPUSD3Q6P087 RNU6-162P-201ENST00000516228 103 ntBASIC-1.26□□□□□ -2.61
RPUSD3Q6P087 RNU7-151P-201ENST00000516930 53 ntBASIC-1.26□□□□□ -2.61
RPUSD3Q6P087 SNORD113-3-201ENST00000364830 72 ntBASIC-1.27□□□□□ -2.61
RPUSD3Q6P087 SNORA8.1-201ENST00000384250 140 ntBASIC-1.27□□□□□ -2.61
RPUSD3Q6P087 MIR579-201ENST00000385221 98 ntBASIC-1.27□□□□□ -2.61
RPUSD3Q6P087 MTATP8P2-201ENST00000435212 202 ntBASIC-1.27□□□□□ -2.61
RPUSD3Q6P087 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.27□□□□□ -2.61
RPUSD3Q6P087 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.27□□□□□ -2.61
RPUSD3Q6P087 U7.3-201ENST00000616123 62 ntBASIC-1.27□□□□□ -2.61
RPUSD3Q6P087 MIR198-201ENST00000637333 62 ntBASIC-1.27□□□□□ -2.61
RPUSD3Q6P087 SNORA27.2-201ENST00000363365 126 ntBASIC-1.28□□□□□ -2.61
RPUSD3Q6P087 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.28□□□□□ -2.61
RPUSD3Q6P087 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.28□□□□□ -2.61
RPUSD3Q6P087 SNORD63.2-201ENST00000516303 64 ntBASIC-1.28□□□□□ -2.61
RPUSD3Q6P087 RNU6-109P-201ENST00000516364 107 ntBASIC-1.28□□□□□ -2.61
RPUSD3Q6P087 RNU6-184P-201ENST00000516514 107 ntBASIC-1.28□□□□□ -2.61
RPUSD3Q6P087 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.28□□□□□ -2.61
RPUSD3Q6P087 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.28□□□□□ -2.61
RPUSD3Q6P087 RNU6-209P-201ENST00000384118 107 ntBASIC-1.29□□□□□ -2.62
RPUSD3Q6P087 RNU6-141P-201ENST00000410499 105 ntBASIC-1.29□□□□□ -2.62
RPUSD3Q6P087 MIR3675-201ENST00000583661 73 ntBASIC-1.29□□□□□ -2.62
RPUSD3Q6P087 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.29□□□□□ -2.62
RPUSD3Q6P087 RNU6-633P-201ENST00000362612 103 ntBASIC-1.3□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.3□□□□□ -2.62
RPUSD3Q6P087 RNU6-681P-201ENST00000364012 104 ntBASIC-1.3□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.3□□□□□ -2.62
RPUSD3Q6P087 RNU6-219P-201ENST00000364728 107 ntBASIC-1.3□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.3□□□□□ -2.62
RPUSD3Q6P087 RNU6-106P-201ENST00000384405 107 ntBASIC-1.3□□□□□ -2.62
RPUSD3Q6P087 MIR519C-201ENST00000385053 87 ntBASIC-1.3□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.3□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.3□□□□□ -2.62
RPUSD3Q6P087 MIR4723-201ENST00000585070 81 ntBASIC-1.3□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.3□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.3□□□□□ -2.62
RPUSD3Q6P087 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.31□□□□□ -2.62
RPUSD3Q6P087 MIR548N-201ENST00000408742 75 ntBASIC-1.31□□□□□ -2.62
RPUSD3Q6P087 RNU6-172P-201ENST00000411000 93 ntBASIC-1.31□□□□□ -2.62
RPUSD3Q6P087 AC097484.2-201ENST00000509147 251 ntBASIC-1.31□□□□□ -2.62
RPUSD3Q6P087 RNU6-557P-201ENST00000516842 110 ntBASIC-1.31□□□□□ -2.62
RPUSD3Q6P087 RNU6-303P-201ENST00000517091 106 ntBASIC-1.31□□□□□ -2.62
RPUSD3Q6P087 FTX_4.1-201ENST00000616291 147 ntBASIC-1.31□□□□□ -2.62
RPUSD3Q6P087 MIR664A-201ENST00000626086 82 ntBASIC-1.31□□□□□ -2.62
RPUSD3Q6P087 RNU6-247P-201ENST00000362636 107 ntBASIC-1.32□□□□□ -2.62
RPUSD3Q6P087 SNORD45.1-201ENST00000363181 77 ntBASIC-1.32□□□□□ -2.62
RPUSD3Q6P087 SNORD116-24-201ENST00000384549 92 ntBASIC-1.32□□□□□ -2.62
RPUSD3Q6P087 RNU6-267P-201ENST00000516714 103 ntBASIC-1.32□□□□□ -2.62
RPUSD3Q6P087 MIR466-201ENST00000580653 84 ntBASIC-1.32□□□□□ -2.62
RPUSD3Q6P087 SNORD113.1-201ENST00000363280 73 ntBASIC-1.33□□□□□ -2.62
RPUSD3Q6P087 RNU6-554P-201ENST00000410466 106 ntBASIC-1.33□□□□□ -2.62
RPUSD3Q6P087 AC008267.6-201ENST00000441664 139 ntBASIC-1.33□□□□□ -2.62
RPUSD3Q6P087 MIR429-201ENST00000362106 83 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 MIR202-201ENST00000362219 110 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 SNORD18C-201ENST00000362704 69 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 SNORD45A-201ENST00000384512 84 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 MIR3668-201ENST00000582138 75 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 MIR4668-201ENST00000582284 70 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.34□□□□□ -2.62
RPUSD3Q6P087 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.35□□□□□ -2.63
RPUSD3Q6P087 RNA5SP215-201ENST00000363440 122 ntBASIC-1.35□□□□□ -2.63
RPUSD3Q6P087 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.35□□□□□ -2.63
RPUSD3Q6P087 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.35□□□□□ -2.63
RPUSD3Q6P087 SNORA19-201ENST00000384737 128 ntBASIC-1.35□□□□□ -2.63
RPUSD3Q6P087 MIR4484-201ENST00000582855 83 ntBASIC-1.35□□□□□ -2.63
RPUSD3Q6P087 MIR3133-201ENST00000583157 78 ntBASIC-1.35□□□□□ -2.63
RPUSD3Q6P087 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.36□□□□□ -2.63
RPUSD3Q6P087 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.36□□□□□ -2.63
RPUSD3Q6P087 RNU6-530P-201ENST00000391180 107 ntBASIC-1.36□□□□□ -2.63
RPUSD3Q6P087 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.36□□□□□ -2.63
RPUSD3Q6P087 RNU6-402P-201ENST00000410678 103 ntBASIC-1.36□□□□□ -2.63
RPUSD3Q6P087 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.37□□□□□ -2.63
RPUSD3Q6P087 MIR3671-201ENST00000580455 88 ntBASIC-1.37□□□□□ -2.63
RPUSD3Q6P087 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.38□□□□□ -2.63
RPUSD3Q6P087 RNY1P1-201ENST00000364372 112 ntBASIC-1.38□□□□□ -2.63
RPUSD3Q6P087 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.38□□□□□ -2.63
RPUSD3Q6P087 RNU6-686P-201ENST00000364839 107 ntBASIC-1.38□□□□□ -2.63
RPUSD3Q6P087 RNU6-520P-201ENST00000384717 104 ntBASIC-1.38□□□□□ -2.63
RPUSD3Q6P087 AC093729.1-201ENST00000513074 128 ntBASIC-1.38□□□□□ -2.63
RPUSD3Q6P087 AP001318.4-201ENST00000616637 121 ntBASIC-1.38□□□□□ -2.63
RPUSD3Q6P087 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.38□□□□□ -2.63
RPUSD3Q6P087 MIR548BB-201ENST00000626714 66 ntBASIC-1.38□□□□□ -2.63
RPUSD3Q6P087 RNA5SP93-201ENST00000362525 114 ntBASIC-1.39□□□□□ -2.63
RPUSD3Q6P087 RNU6-912P-201ENST00000363800 104 ntBASIC-1.39□□□□□ -2.63
RPUSD3Q6P087 RNY4P18-201ENST00000391107 89 ntBASIC-1.39□□□□□ -2.63
RPUSD3Q6P087 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms