Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.48□□□□□ -2.65
CDH13P55290 MIR527-201ENST00000385244 85 ntBASIC-1.48□□□□□ -2.65
CDH13P55290 MIR548V-201ENST00000584165 80 ntBASIC-1.49□□□□□ -2.65
CDH13P55290 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.5□□□□□ -2.65
CDH13P55290 U4.4-201ENST00000620626 117 ntBASIC-1.5□□□□□ -2.65
CDH13P55290 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.5□□□□□ -2.65
CDH13P55290 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.51□□□□□ -2.65
CDH13P55290 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.51□□□□□ -2.65
CDH13P55290 SNORD45A-201ENST00000384512 84 ntBASIC-1.51□□□□□ -2.65
CDH13P55290 MIR601-201ENST00000385256 79 ntBASIC-1.51□□□□□ -2.65
CDH13P55290 MIR4666B-201ENST00000578142 81 ntBASIC-1.51□□□□□ -2.65
CDH13P55290 MIR664A-201ENST00000626086 82 ntBASIC-1.51□□□□□ -2.65
CDH13P55290 MIR494-201ENST00000349529 81 ntBASIC-1.52□□□□□ -2.65
CDH13P55290 RNA5SP173-201ENST00000364857 136 ntBASIC-1.52□□□□□ -2.65
CDH13P55290 RNU6-696P-201ENST00000390834 107 ntBASIC-1.52□□□□□ -2.65
CDH13P55290 SNORD19-201ENST00000391191 68 ntBASIC-1.52□□□□□ -2.65
CDH13P55290 MIR4490-201ENST00000582647 84 ntBASIC-1.52□□□□□ -2.65
CDH13P55290 RNU6-820P-201ENST00000384273 107 ntBASIC-1.53□□□□□ -2.65
CDH13P55290 SNORD113-2-201ENST00000391082 72 ntBASIC-1.53□□□□□ -2.65
CDH13P55290 MIR1468-201ENST00000410600 86 ntBASIC-1.53□□□□□ -2.65
CDH13P55290 RNA5SP461-201ENST00000516451 104 ntBASIC-1.53□□□□□ -2.65
CDH13P55290 MIR6818-201ENST00000621576 65 ntBASIC-1.53□□□□□ -2.65
CDH13P55290 MIR5683-201ENST00000636514 76 ntBASIC-1.53□□□□□ -2.65
CDH13P55290 MIR198-201ENST00000637333 62 ntBASIC-1.54□□□□□ -2.66
CDH13P55290 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.55□□□□□ -2.66
CDH13P55290 RNU6-70P-201ENST00000516438 60 ntBASIC-1.55□□□□□ -2.66
CDH13P55290 RNU6-706P-201ENST00000517229 104 ntBASIC-1.55□□□□□ -2.66
CDH13P55290 MIR5582-201ENST00000579697 68 ntBASIC-1.55□□□□□ -2.66
CDH13P55290 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.55□□□□□ -2.66
CDH13P55290 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.56□□□□□ -2.66
CDH13P55290 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.56□□□□□ -2.66
CDH13P55290 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.57□□□□□ -2.66
CDH13P55290 MIR630-201ENST00000384957 97 ntBASIC-1.57□□□□□ -2.66
CDH13P55290 MIR154-201ENST00000385243 84 ntBASIC-1.57□□□□□ -2.66
CDH13P55290 MIR507-201ENST00000385234 94 ntBASIC-1.58□□□□□ -2.66
CDH13P55290 RNU7-134P-201ENST00000458997 64 ntBASIC-1.58□□□□□ -2.66
CDH13P55290 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.58□□□□□ -2.66
CDH13P55290 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.59□□□□□ -2.66
CDH13P55290 AP002795.1-201ENST00000534879 84 ntBASIC-1.59□□□□□ -2.66
CDH13P55290 RNA5SP26-201ENST00000362406 119 ntBASIC-1.6□□□□□ -2.67
CDH13P55290 RNU6-895P-201ENST00000384125 103 ntBASIC-1.6□□□□□ -2.67
CDH13P55290 RNU6-576P-201ENST00000390854 102 ntBASIC-1.6□□□□□ -2.67
CDH13P55290 MIR548Q-201ENST00000408404 100 ntBASIC-1.6□□□□□ -2.67
CDH13P55290 SNORD116-16-201ENST00000384533 92 ntBASIC-1.62□□□□□ -2.67
CDH13P55290 MIR8485-201ENST00000401372 91 ntBASIC-1.62□□□□□ -2.67
CDH13P55290 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.63□□□□□ -2.67
CDH13P55290 RNU6-598P-201ENST00000364017 105 ntBASIC-1.64□□□□□ -2.67
CDH13P55290 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.64□□□□□ -2.67
CDH13P55290 AC138207.3-201ENST00000585289 166 ntBASIC-1.65□□□□□ -2.67
CDH13P55290 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.65□□□□□ -2.67
CDH13P55290 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.66□□□□□ -2.68
CDH13P55290 RNU6-787P-201ENST00000384032 107 ntBASIC-1.66□□□□□ -2.68
CDH13P55290 SNORD116-24-201ENST00000384549 92 ntBASIC-1.66□□□□□ -2.68
CDH13P55290 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.66□□□□□ -2.68
CDH13P55290 HLA-S-202ENST00000425174 53 ntBASIC-1.67□□□□□ -2.68
CDH13P55290 MIR3134-201ENST00000579433 74 ntBASIC-1.67□□□□□ -2.68
CDH13P55290 RNU6-164P-201ENST00000364604 103 ntBASIC-1.68□□□□□ -2.68
CDH13P55290 RNA5SP180-201ENST00000516181 101 ntBASIC-1.68□□□□□ -2.68
CDH13P55290 RNU6-687P-201ENST00000516443 89 ntBASIC-1.68□□□□□ -2.68
CDH13P55290 AC062037.1-201ENST00000605302 128 ntBASIC-1.68□□□□□ -2.68
CDH13P55290 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.68□□□□□ -2.68
CDH13P55290 MIR1285-2-201ENST00000408311 88 ntBASIC-1.69□□□□□ -2.68
CDH13P55290 SNORD115-31-201ENST00000365318 82 ntBASIC-1.7□□□□□ -2.68
CDH13P55290 RNU6-411P-201ENST00000384451 107 ntBASIC-1.7□□□□□ -2.68
CDH13P55290 MIR365A-201ENST00000362260 87 ntBASIC-1.71□□□□□ -2.68
CDH13P55290 MIR548AA1-201ENST00000384971 97 ntBASIC-1.71□□□□□ -2.68
CDH13P55290 U7.4-201ENST00000614961 63 ntBASIC-1.71□□□□□ -2.68
CDH13P55290 SNORA41B-201ENST00000384785 128 ntBASIC-1.72□□□□□ -2.68
CDH13P55290 MIR889-201ENST00000401280 79 ntBASIC-1.72□□□□□ -2.68
CDH13P55290 RNU6-542P-201ENST00000516405 103 ntBASIC-1.72□□□□□ -2.68
CDH13P55290 U4.2-201ENST00000618561 85 ntBASIC-1.72□□□□□ -2.68
CDH13P55290 RNU6-630P-201ENST00000391258 106 ntBASIC-1.73□□□□□ -2.69
CDH13P55290 RNA5SP170-201ENST00000517150 101 ntBASIC-1.73□□□□□ -2.69
CDH13P55290 MIR5591-201ENST00000578248 65 ntBASIC-1.73□□□□□ -2.69
CDH13P55290 U2.18-201ENST00000622185 84 ntBASIC-1.73□□□□□ -2.69
CDH13P55290 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.74□□□□□ -2.69
CDH13P55290 AC090616.4-201ENST00000448026 115 ntBASIC-1.74□□□□□ -2.69
CDH13P55290 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.74□□□□□ -2.69
CDH13P55290 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.74□□□□□ -2.69
CDH13P55290 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.74□□□□□ -2.69
CDH13P55290 RPL35AP4-201ENST00000412007 102 ntBASIC-1.75□□□□□ -2.69
CDH13P55290 MIR4441-201ENST00000582623 100 ntBASIC-1.75□□□□□ -2.69
CDH13P55290 MIR3202-2-201ENST00000635980 79 ntBASIC-1.75□□□□□ -2.69
CDH13P55290 MIR4520-1-201ENST00000582609 70 ntBASIC-1.76□□□□□ -2.69
CDH13P55290 MIR4723-201ENST00000585070 81 ntBASIC-1.77□□□□□ -2.69
CDH13P55290 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.78□□□□□ -2.69
CDH13P55290 MIR23C-201ENST00000579846 100 ntBASIC-1.78□□□□□ -2.69
CDH13P55290 SNORD1B-201ENST00000363091 84 ntBASIC-1.79□□□□□ -2.7
CDH13P55290 RNU6-226P-201ENST00000363778 107 ntBASIC-1.79□□□□□ -2.7
CDH13P55290 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.79□□□□□ -2.7
CDH13P55290 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.79□□□□□ -2.7
CDH13P55290 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.79□□□□□ -2.7
CDH13P55290 AC091912.2-201ENST00000624798 167 ntBASIC-1.79□□□□□ -2.7
CDH13P55290 RNU6-608P-201ENST00000383927 104 ntBASIC-1.8□□□□□ -2.7
CDH13P55290 MIR4770-201ENST00000579149 58 ntBASIC-1.8□□□□□ -2.7
CDH13P55290 MIR6874-201ENST00000635894 71 ntBASIC-1.8□□□□□ -2.7
CDH13P55290 SNORD114-3-201ENST00000364969 75 ntBASIC-1.81□□□□□ -2.7
CDH13P55290 MIR520D-201ENST00000385002 87 ntBASIC-1.81□□□□□ -2.7
CDH13P55290 MIR3170-201ENST00000582699 77 ntBASIC-1.81□□□□□ -2.7
CDH13P55290 RNU6-92P-201ENST00000605893 104 ntBASIC-1.81□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 2376.2 ms