Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RNU6-563P-201ENST00000364872 108 ntBASIC0.35□□□□□ -2.35
HMGA2P52926 RNU7-165P-201ENST00000458864 60 ntBASIC0.35□□□□□ -2.35
HMGA2P52926 RNY1P9-201ENST00000532431 109 ntBASIC0.35□□□□□ -2.35
HMGA2P52926 MIR4714-201ENST00000580728 77 ntBASIC0.35□□□□□ -2.35
HMGA2P52926 SNORD115-33-201ENST00000363723 82 ntBASIC0.34□□□□□ -2.36
HMGA2P52926 Y_RNA.223-201ENST00000364290 113 ntBASIC0.34□□□□□ -2.36
HMGA2P52926 Y_RNA.338-201ENST00000365320 114 ntBASIC0.34□□□□□ -2.36
HMGA2P52926 MIR216A-201ENST00000385063 110 ntBASIC0.34□□□□□ -2.36
HMGA2P52926 AL353691.2-201ENST00000443795 59 ntBASIC0.34□□□□□ -2.36
HMGA2P52926 AL603825.1-201ENST00000438481 80 ntBASIC0.33□□□□□ -2.36
HMGA2P52926 SNORD18.2-201ENST00000459604 70 ntBASIC0.33□□□□□ -2.36
HMGA2P52926 RPS29P1-201ENST00000465274 159 ntBASIC0.33□□□□□ -2.36
HMGA2P52926 RNU6-1053P-201ENST00000515930 101 ntBASIC0.33□□□□□ -2.36
HMGA2P52926 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.33□□□□□ -2.36
HMGA2P52926 MIR145-201ENST00000384967 88 ntBASIC0.32□□□□□ -2.36
HMGA2P52926 RNU6-237P-201ENST00000515985 71 ntBASIC0.32□□□□□ -2.36
HMGA2P52926 SNORD22.1-201ENST00000516331 125 ntBASIC0.32□□□□□ -2.36
HMGA2P52926 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.32□□□□□ -2.36
HMGA2P52926 SNORD114-17-201ENST00000364699 75 ntBASIC0.31□□□□□ -2.36
HMGA2P52926 SNORD60-201ENST00000383903 83 ntBASIC0.31□□□□□ -2.36
HMGA2P52926 RNU6-176P-201ENST00000517196 105 ntBASIC0.31□□□□□ -2.36
HMGA2P52926 AL590491.3-201ENST00000610731 82 ntBASIC0.31□□□□□ -2.36
HMGA2P52926 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.3□□□□□ -2.36
HMGA2P52926 MIR1276-201ENST00000408707 83 ntBASIC0.29□□□□□ -2.36
HMGA2P52926 Y_RNA.603-201ENST00000410571 108 ntBASIC0.29□□□□□ -2.36
HMGA2P52926 AC090616.4-201ENST00000448026 115 ntBASIC0.29□□□□□ -2.36
HMGA2P52926 U6.97-201ENST00000636904 101 ntBASIC0.29□□□□□ -2.36
HMGA2P52926 RNA5SP26-201ENST00000362406 119 ntBASIC0.28□□□□□ -2.36
HMGA2P52926 SNORD115.2-201ENST00000391126 59 ntBASIC0.28□□□□□ -2.36
HMGA2P52926 RNA5SP121-201ENST00000516537 101 ntBASIC0.28□□□□□ -2.36
HMGA2P52926 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
HMGA2P52926 RNU6-1091P-201ENST00000363945 107 ntBASIC0.27□□□□□ -2.37
HMGA2P52926 SNORD74.6-201ENST00000364796 70 ntBASIC0.27□□□□□ -2.37
HMGA2P52926 SNORD114-22-201ENST00000365423 72 ntBASIC0.27□□□□□ -2.37
HMGA2P52926 RNU6-929P-201ENST00000384429 107 ntBASIC0.27□□□□□ -2.37
HMGA2P52926 MIR507-201ENST00000385234 94 ntBASIC0.27□□□□□ -2.37
HMGA2P52926 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
HMGA2P52926 SNORD114-5-201ENST00000362928 70 ntBASIC0.26□□□□□ -2.37
HMGA2P52926 RNA5SP214-201ENST00000363378 118 ntBASIC0.26□□□□□ -2.37
HMGA2P52926 Y_RNA.189-201ENST00000363959 112 ntBASIC0.26□□□□□ -2.37
HMGA2P52926 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
HMGA2P52926 MIR548AJ2-201ENST00000408539 92 ntBASIC0.26□□□□□ -2.37
HMGA2P52926 AC120024.2-201ENST00000576526 175 ntBASIC0.26□□□□□ -2.37
HMGA2P52926 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
HMGA2P52926 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
HMGA2P52926 SNORD114-9-201ENST00000364370 72 ntBASIC0.25□□□□□ -2.37
HMGA2P52926 RNA5SP224-201ENST00000365069 126 ntBASIC0.25□□□□□ -2.37
HMGA2P52926 Y_RNA.519-201ENST00000384553 102 ntBASIC0.25□□□□□ -2.37
HMGA2P52926 SNORD75.1-201ENST00000408373 60 ntBASIC0.25□□□□□ -2.37
HMGA2P52926 MIR4645-201ENST00000583158 77 ntBASIC0.25□□□□□ -2.37
HMGA2P52926 RNU6-1169P-201ENST00000363537 103 ntBASIC0.24□□□□□ -2.37
HMGA2P52926 SNORD49B-201ENST00000365172 72 ntBASIC0.24□□□□□ -2.37
HMGA2P52926 MIR518B-201ENST00000385127 83 ntBASIC0.24□□□□□ -2.37
HMGA2P52926 MIR610-201ENST00000385139 96 ntBASIC0.24□□□□□ -2.37
HMGA2P52926 RNU6-695P-201ENST00000391157 104 ntBASIC0.24□□□□□ -2.37
HMGA2P52926 AP000533.3-201ENST00000447704 118 ntBASIC0.24□□□□□ -2.37
HMGA2P52926 RNU7-159P-201ENST00000459284 62 ntBASIC0.24□□□□□ -2.37
HMGA2P52926 MIR4743-201ENST00000584576 69 ntBASIC0.24□□□□□ -2.37
HMGA2P52926 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.24□□□□□ -2.37
HMGA2P52926 MIR5000-201ENST00000577717 103 ntBASIC0.23□□□□□ -2.37
HMGA2P52926 MIR6504-201ENST00000613520 61 ntBASIC0.23□□□□□ -2.37
HMGA2P52926 MIR548T-201ENST00000408369 74 ntBASIC0.22□□□□□ -2.37
HMGA2P52926 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
HMGA2P52926 MIR6788-201ENST00000618842 66 ntBASIC0.22□□□□□ -2.37
HMGA2P52926 RNU6-836P-201ENST00000362920 107 ntBASIC0.21□□□□□ -2.38
HMGA2P52926 RNA5SP66-201ENST00000517178 101 ntBASIC0.21□□□□□ -2.38
HMGA2P52926 RNU6-912P-201ENST00000363800 104 ntBASIC0.2□□□□□ -2.38
HMGA2P52926 VTRNA1-3-201ENST00000365645 89 ntBASIC0.2□□□□□ -2.38
HMGA2P52926 MIR3179-1-201ENST00000578940 84 ntBASIC0.2□□□□□ -2.38
HMGA2P52926 MIR3179-2-201ENST00000579107 84 ntBASIC0.2□□□□□ -2.38
HMGA2P52926 MIR3179-3-201ENST00000579566 84 ntBASIC0.2□□□□□ -2.38
HMGA2P52926 MIR3179-4-201ENST00000617599 84 ntBASIC0.2□□□□□ -2.38
HMGA2P52926 Y_RNA.129-201ENST00000363392 110 ntBASIC0.19□□□□□ -2.38
HMGA2P52926 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
HMGA2P52926 MIR6513-201ENST00000621188 64 ntBASIC0.19□□□□□ -2.38
HMGA2P52926 SNORD114-11-201ENST00000363738 75 ntBASIC0.18□□□□□ -2.38
HMGA2P52926 Y_RNA.260-201ENST00000364628 101 ntBASIC0.18□□□□□ -2.38
HMGA2P52926 MIR1197-201ENST00000408818 88 ntBASIC0.18□□□□□ -2.38
HMGA2P52926 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.18□□□□□ -2.38
HMGA2P52926 RNU6-46P-201ENST00000383860 107 ntBASIC0.17□□□□□ -2.38
HMGA2P52926 RNA5SP134-201ENST00000516492 96 ntBASIC0.17□□□□□ -2.38
HMGA2P52926 MIR4711-201ENST00000578274 70 ntBASIC0.17□□□□□ -2.38
HMGA2P52926 MIR4452-201ENST00000583004 71 ntBASIC0.17□□□□□ -2.38
HMGA2P52926 MIR4298-201ENST00000584380 73 ntBASIC0.17□□□□□ -2.38
HMGA2P52926 AC093726.3-201ENST00000637588 150 ntBASIC0.17□□□□□ -2.38
HMGA2P52926 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.16□□□□□ -2.38
HMGA2P52926 RNA5SP193-201ENST00000410353 107 ntBASIC0.16□□□□□ -2.38
HMGA2P52926 SNORA62.5-201ENST00000516634 120 ntBASIC0.16□□□□□ -2.38
HMGA2P52926 FTX_4.1-201ENST00000616291 147 ntBASIC0.16□□□□□ -2.38
HMGA2P52926 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
HMGA2P52926 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.14□□□□□ -2.39
HMGA2P52926 SNORD18C-201ENST00000362704 69 ntBASIC0.13□□□□□ -2.39
HMGA2P52926 SNORD45C-201ENST00000383893 79 ntBASIC0.13□□□□□ -2.39
HMGA2P52926 MIR23C-201ENST00000579846 100 ntBASIC0.13□□□□□ -2.39
HMGA2P52926 MIR4290-201ENST00000583807 95 ntBASIC0.13□□□□□ -2.39
HMGA2P52926 MIR379-201ENST00000362218 67 ntBASIC0.12□□□□□ -2.39
HMGA2P52926 RNU6-79P-201ENST00000362511 107 ntBASIC0.12□□□□□ -2.39
HMGA2P52926 RNU6-431P-201ENST00000383874 107 ntBASIC0.12□□□□□ -2.39
HMGA2P52926 MIR936-201ENST00000401264 98 ntBASIC0.12□□□□□ -2.39
HMGA2P52926 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 367.4 ms