Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 MIR643-201ENST00000385267 97 ntBASIC1.53□□□□□ -2.16
HOXD11P31277 MIR548T-201ENST00000408369 74 ntBASIC1.53□□□□□ -2.16
HOXD11P31277 SNORA26.4-201ENST00000391188 123 ntBASIC1.52□□□□□ -2.17
HOXD11P31277 RNU6-939P-201ENST00000384634 107 ntBASIC1.51□□□□□ -2.17
HOXD11P31277 MIR150-201ENST00000385048 84 ntBASIC1.51□□□□□ -2.17
HOXD11P31277 MIR8087-201ENST00000612745 78 ntBASIC1.51□□□□□ -2.17
HOXD11P31277 AC114755.3-201ENST00000481111 251 ntBASIC1.5□□□□□ -2.17
HOXD11P31277 SNORD18.2-201ENST00000459604 70 ntBASIC1.49□□□□□ -2.17
HOXD11P31277 CR383656.4-201ENST00000546909 122 ntBASIC1.49□□□□□ -2.17
HOXD11P31277 RNU6-836P-201ENST00000362920 107 ntBASIC1.48□□□□□ -2.17
HOXD11P31277 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
HOXD11P31277 AC010487.4-201ENST00000637027 61 ntBASIC1.48□□□□□ -2.17
HOXD11P31277 Y_RNA.320-201ENST00000365144 102 ntBASIC1.47□□□□□ -2.17
HOXD11P31277 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
HOXD11P31277 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
HOXD11P31277 SNORD115-33-201ENST00000363723 82 ntBASIC1.46□□□□□ -2.18
HOXD11P31277 SNORD44.1-201ENST00000363202 61 ntBASIC1.45□□□□□ -2.18
HOXD11P31277 SNORD56B-201ENST00000384713 71 ntBASIC1.45□□□□□ -2.18
HOXD11P31277 RNU6-127P-201ENST00000390897 107 ntBASIC1.45□□□□□ -2.18
HOXD11P31277 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC1.45□□□□□ -2.18
HOXD11P31277 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HOXD11P31277 MIR330-201ENST00000362196 94 ntBASIC1.43□□□□□ -2.18
HOXD11P31277 SNORD114-23-201ENST00000363536 72 ntBASIC1.42□□□□□ -2.18
HOXD11P31277 MIR148A-201ENST00000362215 68 ntBASIC1.4□□□□□ -2.19
HOXD11P31277 RNA5SP163-201ENST00000410304 99 ntBASIC1.4□□□□□ -2.19
HOXD11P31277 AL445193.1-201ENST00000441183 141 ntBASIC1.4□□□□□ -2.19
HOXD11P31277 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC1.4□□□□□ -2.19
HOXD11P31277 Y_RNA.223-201ENST00000364290 113 ntBASIC1.38□□□□□ -2.19
HOXD11P31277 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HOXD11P31277 snoU13.19-201ENST00000459148 104 ntBASIC1.38□□□□□ -2.19
HOXD11P31277 RPL35AP4-201ENST00000412007 102 ntBASIC1.37□□□□□ -2.19
HOXD11P31277 RNU6-68P-201ENST00000516576 104 ntBASIC1.37□□□□□ -2.19
HOXD11P31277 CYP3A137P-201ENST00000562436 69 ntBASIC1.37□□□□□ -2.19
HOXD11P31277 MIR23C-201ENST00000579846 100 ntBASIC1.37□□□□□ -2.19
HOXD11P31277 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
HOXD11P31277 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.36□□□□□ -2.19
HOXD11P31277 AC211469.2-201ENST00000605461 205 ntBASIC1.36□□□□□ -2.19
HOXD11P31277 AC013734.1-201ENST00000619329 111 ntBASIC1.36□□□□□ -2.19
HOXD11P31277 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
HOXD11P31277 MIR1197-201ENST00000408818 88 ntBASIC1.35□□□□□ -2.19
HOXD11P31277 Y_RNA.603-201ENST00000410571 108 ntBASIC1.34□□□□□ -2.19
HOXD11P31277 RNA5SP285-201ENST00000516619 119 ntBASIC1.34□□□□□ -2.19
HOXD11P31277 MIR4723-201ENST00000585070 81 ntBASIC1.34□□□□□ -2.19
HOXD11P31277 U6.97-201ENST00000636904 101 ntBASIC1.34□□□□□ -2.19
HOXD11P31277 MIR373-201ENST00000362273 69 ntBASIC1.33□□□□□ -2.2
HOXD11P31277 MIR379-201ENST00000362218 67 ntBASIC1.32□□□□□ -2.2
HOXD11P31277 PSMC1P5-201ENST00000512850 177 ntBASIC1.32□□□□□ -2.2
HOXD11P31277 RNU6-180P-201ENST00000516697 61 ntBASIC1.32□□□□□ -2.2
HOXD11P31277 MIR581-201ENST00000384895 96 ntBASIC1.31□□□□□ -2.2
HOXD11P31277 Y_RNA.260-201ENST00000364628 101 ntBASIC1.3□□□□□ -2.2
HOXD11P31277 MIR6513-201ENST00000621188 64 ntBASIC1.3□□□□□ -2.2
HOXD11P31277 SNORD74.6-201ENST00000364796 70 ntBASIC1.29□□□□□ -2.2
HOXD11P31277 Y_RNA.406-201ENST00000383984 100 ntBASIC1.29□□□□□ -2.2
HOXD11P31277 MIR2909-201ENST00000617113 69 ntBASIC1.29□□□□□ -2.2
HOXD11P31277 MIR507-201ENST00000385234 94 ntBASIC1.28□□□□□ -2.2
HOXD11P31277 MIR1304-201ENST00000408243 91 ntBASIC1.28□□□□□ -2.2
HOXD11P31277 MIR936-201ENST00000401264 98 ntBASIC1.27□□□□□ -2.21
HOXD11P31277 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
HOXD11P31277 MIR103A1-201ENST00000362165 78 ntBASIC1.26□□□□□ -2.21
HOXD11P31277 MIR892B-201ENST00000401279 77 ntBASIC1.26□□□□□ -2.21
HOXD11P31277 MIR4280-201ENST00000582178 76 ntBASIC1.25□□□□□ -2.21
HOXD11P31277 RNA5SP224-201ENST00000365069 126 ntBASIC1.24□□□□□ -2.21
HOXD11P31277 RNU6-815P-201ENST00000384080 113 ntBASIC1.23□□□□□ -2.21
HOXD11P31277 AC244250.2-201ENST00000418731 148 ntBASIC1.22□□□□□ -2.21
HOXD11P31277 SNORD38.3-201ENST00000516599 73 ntBASIC1.22□□□□□ -2.21
HOXD11P31277 Y_RNA.335-201ENST00000365299 96 ntBASIC1.21□□□□□ -2.22
HOXD11P31277 MIR4636-201ENST00000582271 80 ntBASIC1.21□□□□□ -2.22
HOXD11P31277 MIR4714-201ENST00000580728 77 ntBASIC1.2□□□□□ -2.22
HOXD11P31277 RNU6-30P-201ENST00000384561 107 ntBASIC1.19□□□□□ -2.22
HOXD11P31277 MIR3973-201ENST00000579824 107 ntBASIC1.19□□□□□ -2.22
HOXD11P31277 MIR6851-201ENST00000617060 67 ntBASIC1.18□□□□□ -2.22
HOXD11P31277 SNORD114-17-201ENST00000364699 75 ntBASIC1.16□□□□□ -2.22
HOXD11P31277 SNORA68.3-201ENST00000515906 83 ntBASIC1.16□□□□□ -2.22
HOXD11P31277 AC068338.1-201ENST00000565567 176 ntBASIC1.16□□□□□ -2.22
HOXD11P31277 AC120024.2-201ENST00000576526 175 ntBASIC1.16□□□□□ -2.22
HOXD11P31277 SNORD18C-201ENST00000362704 69 ntBASIC1.15□□□□□ -2.23
HOXD11P31277 RNU6-929P-201ENST00000384429 107 ntBASIC1.15□□□□□ -2.23
HOXD11P31277 MIR6857-201ENST00000613267 93 ntBASIC1.15□□□□□ -2.23
HOXD11P31277 MIR548AJ2-201ENST00000408539 92 ntBASIC1.14□□□□□ -2.23
HOXD11P31277 MIR518B-201ENST00000385127 83 ntBASIC1.13□□□□□ -2.23
HOXD11P31277 RNU6-695P-201ENST00000391157 104 ntBASIC1.13□□□□□ -2.23
HOXD11P31277 RNA5SP193-201ENST00000410353 107 ntBASIC1.13□□□□□ -2.23
HOXD11P31277 RNA5SP25-201ENST00000410815 110 ntBASIC1.13□□□□□ -2.23
HOXD11P31277 MIR6759-201ENST00000638110 65 ntBASIC1.12□□□□□ -2.23
HOXD11P31277 SNORD45C-201ENST00000383893 79 ntBASIC1.11□□□□□ -2.23
HOXD11P31277 SNORD22.1-201ENST00000516331 125 ntBASIC1.11□□□□□ -2.23
HOXD11P31277 AC069113.3-201ENST00000521019 150 ntBASIC1.11□□□□□ -2.23
HOXD11P31277 FTX_4.1-201ENST00000616291 147 ntBASIC1.11□□□□□ -2.23
HOXD11P31277 MIR409-201ENST00000362237 79 ntBASIC1.1□□□□□ -2.23
HOXD11P31277 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
HOXD11P31277 MIR548H2-201ENST00000408874 88 ntBASIC1.1□□□□□ -2.23
HOXD11P31277 MIR4711-201ENST00000578274 70 ntBASIC1.09□□□□□ -2.23
HOXD11P31277 RNU6-563P-201ENST00000364872 108 ntBASIC1.08□□□□□ -2.24
HOXD11P31277 MIR593-201ENST00000384856 100 ntBASIC1.08□□□□□ -2.24
HOXD11P31277 MIR532-201ENST00000385025 91 ntBASIC1.08□□□□□ -2.24
HOXD11P31277 MIR610-201ENST00000385139 96 ntBASIC1.08□□□□□ -2.24
HOXD11P31277 MIR5589-201ENST00000579442 60 ntBASIC1.07□□□□□ -2.24
HOXD11P31277 MIRLET7D-201ENST00000362263 87 ntBASIC1.06□□□□□ -2.24
HOXD11P31277 Z95118.1-201ENST00000421372 247 ntBASIC1.06□□□□□ -2.24
HOXD11P31277 SNORD114-15-201ENST00000364687 72 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms