Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNU7-88P-201ENST00000458752 63 ntBASIC0.44□□□□□ -2.34
RXRBP28702 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.44□□□□□ -2.34
RXRBP28702 RNU6-1174P-201ENST00000517278 101 ntBASIC0.44□□□□□ -2.34
RXRBP28702 MIR5704-201ENST00000584029 77 ntBASIC0.44□□□□□ -2.34
RXRBP28702 MIR148A-201ENST00000362215 68 ntBASIC0.43□□□□□ -2.34
RXRBP28702 RNA5SP368-201ENST00000364298 116 ntBASIC0.43□□□□□ -2.34
RXRBP28702 MIR548AA1-201ENST00000384971 97 ntBASIC0.43□□□□□ -2.34
RXRBP28702 RNU6-930P-201ENST00000390938 100 ntBASIC0.43□□□□□ -2.34
RXRBP28702 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.43□□□□□ -2.34
RXRBP28702 RNU6-1133P-201ENST00000410963 100 ntBASIC0.42□□□□□ -2.34
RXRBP28702 IGLVI-20-201ENST00000519296 130 ntBASIC0.42□□□□□ -2.34
RXRBP28702 SNORD56B-201ENST00000384713 71 ntBASIC0.4□□□□□ -2.35
RXRBP28702 AC244250.2-201ENST00000418731 148 ntBASIC0.4□□□□□ -2.35
RXRBP28702 MIR4315-1-201ENST00000636800 73 ntBASIC0.4□□□□□ -2.35
RXRBP28702 MIR4315-2-201ENST00000640925 73 ntBASIC0.4□□□□□ -2.35
RXRBP28702 MIR655-201ENST00000362159 97 ntBASIC0.39□□□□□ -2.35
RXRBP28702 MTRNR2L9-201ENST00000622562 75 ntBASIC0.39□□□□□ -2.35
RXRBP28702 RNU6-838P-201ENST00000363399 108 ntBASIC0.38□□□□□ -2.35
RXRBP28702 MIR4493-201ENST00000584016 73 ntBASIC0.38□□□□□ -2.35
RXRBP28702 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.38□□□□□ -2.35
RXRBP28702 RNU6-974P-201ENST00000384099 108 ntBASIC0.37□□□□□ -2.35
RXRBP28702 MIR593-201ENST00000384856 100 ntBASIC0.37□□□□□ -2.35
RXRBP28702 Y_RNA.613-201ENST00000410726 97 ntBASIC0.37□□□□□ -2.35
RXRBP28702 RNU7-165P-201ENST00000458864 60 ntBASIC0.37□□□□□ -2.35
RXRBP28702 AC114755.3-201ENST00000481111 251 ntBASIC0.37□□□□□ -2.35
RXRBP28702 MIR4743-201ENST00000584576 69 ntBASIC0.37□□□□□ -2.35
RXRBP28702 RNA5SP67-201ENST00000516422 131 ntBASIC0.36□□□□□ -2.35
RXRBP28702 AC104408.1-201ENST00000605241 170 ntBASIC0.36□□□□□ -2.35
RXRBP28702 Y_RNA.139-201ENST00000363464 102 ntBASIC0.35□□□□□ -2.35
RXRBP28702 SNORA42.1-201ENST00000363515 137 ntBASIC0.35□□□□□ -2.35
RXRBP28702 MIR892B-201ENST00000401279 77 ntBASIC0.35□□□□□ -2.35
RXRBP28702 SNORD63.1-201ENST00000516178 80 ntBASIC0.35□□□□□ -2.35
RXRBP28702 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
RXRBP28702 MIR6854-201ENST00000614935 69 ntBASIC0.35□□□□□ -2.35
RXRBP28702 RNU6-828P-201ENST00000364876 107 ntBASIC0.34□□□□□ -2.36
RXRBP28702 MIR145-201ENST00000384967 88 ntBASIC0.34□□□□□ -2.36
RXRBP28702 RNU6-995P-201ENST00000391244 107 ntBASIC0.34□□□□□ -2.36
RXRBP28702 RNA5SP266-201ENST00000410273 108 ntBASIC0.34□□□□□ -2.36
RXRBP28702 MIR604-201ENST00000384880 94 ntBASIC0.32□□□□□ -2.36
RXRBP28702 AL451105.1-201ENST00000450005 189 ntBASIC0.32□□□□□ -2.36
RXRBP28702 MIR610-201ENST00000385139 96 ntBASIC0.31□□□□□ -2.36
RXRBP28702 RNU6-732P-201ENST00000516033 103 ntBASIC0.31□□□□□ -2.36
RXRBP28702 MIR4280-201ENST00000582178 76 ntBASIC0.31□□□□□ -2.36
RXRBP28702 MIR3170-201ENST00000582699 77 ntBASIC0.31□□□□□ -2.36
RXRBP28702 AP001180.6-201ENST00000584918 159 ntBASIC0.31□□□□□ -2.36
RXRBP28702 RNA5SP214-201ENST00000363378 118 ntBASIC0.3□□□□□ -2.36
RXRBP28702 MIR4723-201ENST00000585070 81 ntBASIC0.3□□□□□ -2.36
RXRBP28702 SNORD114-31-201ENST00000363219 75 ntBASIC0.29□□□□□ -2.36
RXRBP28702 SNORD114-9-201ENST00000364370 72 ntBASIC0.29□□□□□ -2.36
RXRBP28702 MIR124-2-201ENST00000385081 109 ntBASIC0.29□□□□□ -2.36
RXRBP28702 SNORD19-201ENST00000391191 68 ntBASIC0.29□□□□□ -2.36
RXRBP28702 AC104692.1-201ENST00000472406 90 ntBASIC0.29□□□□□ -2.36
RXRBP28702 RNU6-1238P-201ENST00000517215 102 ntBASIC0.29□□□□□ -2.36
RXRBP28702 RNU6-247P-201ENST00000362636 107 ntBASIC0.28□□□□□ -2.36
RXRBP28702 SNORD95.1-201ENST00000364099 68 ntBASIC0.28□□□□□ -2.36
RXRBP28702 Y_RNA.457-201ENST00000384237 111 ntBASIC0.28□□□□□ -2.36
RXRBP28702 MIR545-201ENST00000385085 106 ntBASIC0.28□□□□□ -2.36
RXRBP28702 RNU7-159P-201ENST00000459284 62 ntBASIC0.28□□□□□ -2.36
RXRBP28702 MIR371B-201ENST00000638082 66 ntBASIC0.28□□□□□ -2.36
RXRBP28702 MIR4768-201ENST00000585270 74 ntBASIC0.27□□□□□ -2.37
RXRBP28702 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
RXRBP28702 RNU6-901P-201ENST00000384593 106 ntBASIC0.26□□□□□ -2.37
RXRBP28702 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
RXRBP28702 SNORD114-5-201ENST00000362928 70 ntBASIC0.25□□□□□ -2.37
RXRBP28702 MIR520D-201ENST00000385002 87 ntBASIC0.25□□□□□ -2.37
RXRBP28702 RNU6-258P-201ENST00000390884 101 ntBASIC0.25□□□□□ -2.37
RXRBP28702 MIR548AL-201ENST00000578416 97 ntBASIC0.25□□□□□ -2.37
RXRBP28702 MIR29B1-201ENST00000385015 81 ntBASIC0.23□□□□□ -2.37
RXRBP28702 SNORD63.2-201ENST00000516303 64 ntBASIC0.23□□□□□ -2.37
RXRBP28702 RNU6-929P-201ENST00000384429 107 ntBASIC0.22□□□□□ -2.37
RXRBP28702 AP002795.1-201ENST00000534879 84 ntBASIC0.22□□□□□ -2.37
RXRBP28702 RNU6-986P-201ENST00000363133 102 ntBASIC0.21□□□□□ -2.38
RXRBP28702 Y_RNA.610-201ENST00000410681 103 ntBASIC0.21□□□□□ -2.38
RXRBP28702 AL445193.1-201ENST00000441183 141 ntBASIC0.21□□□□□ -2.38
RXRBP28702 MIR6851-201ENST00000617060 67 ntBASIC0.21□□□□□ -2.38
RXRBP28702 SNORD38.3-201ENST00000516599 73 ntBASIC0.2□□□□□ -2.38
RXRBP28702 RNU6-46P-201ENST00000383860 107 ntBASIC0.19□□□□□ -2.38
RXRBP28702 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
RXRBP28702 MIR1468-201ENST00000410600 86 ntBASIC0.19□□□□□ -2.38
RXRBP28702 AL590491.3-201ENST00000610731 82 ntBASIC0.19□□□□□ -2.38
RXRBP28702 RNU6-1233P-201ENST00000362922 102 ntBASIC0.18□□□□□ -2.38
RXRBP28702 SNORD49B-201ENST00000365172 72 ntBASIC0.18□□□□□ -2.38
RXRBP28702 RNU6-1111P-201ENST00000391118 107 ntBASIC0.17□□□□□ -2.38
RXRBP28702 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.17□□□□□ -2.38
RXRBP28702 MIR4290-201ENST00000583807 95 ntBASIC0.16□□□□□ -2.38
RXRBP28702 MIR548Q-201ENST00000408404 100 ntBASIC0.15□□□□□ -2.39
RXRBP28702 RNU6-742P-201ENST00000365289 107 ntBASIC0.14□□□□□ -2.39
RXRBP28702 MIR101-1-201ENST00000362265 75 ntBASIC0.13□□□□□ -2.39
RXRBP28702 Y_RNA.321-201ENST00000365149 102 ntBASIC0.13□□□□□ -2.39
RXRBP28702 SNORD45.2-201ENST00000363552 72 ntBASIC0.12□□□□□ -2.39
RXRBP28702 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
RXRBP28702 MIR1295B-201ENST00000636144 60 ntBASIC0.12□□□□□ -2.39
RXRBP28702 SNORD74.6-201ENST00000364796 70 ntBASIC0.11□□□□□ -2.39
RXRBP28702 RNU6-530P-201ENST00000391180 107 ntBASIC0.11□□□□□ -2.39
RXRBP28702 SNORA26.4-201ENST00000391188 123 ntBASIC0.1□□□□□ -2.39
RXRBP28702 MIR548H4-201ENST00000408689 111 ntBASIC0.1□□□□□ -2.39
RXRBP28702 RNA5SP66-201ENST00000517178 101 ntBASIC0.1□□□□□ -2.39
RXRBP28702 SNX3P1X-201ENST00000414887 175 ntBASIC0.09□□□□□ -2.4
RXRBP28702 SNORA27.2-201ENST00000363365 126 ntBASIC0.08□□□□□ -2.4
RXRBP28702 SNORD18.2-201ENST00000459604 70 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms