Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNU6-815P-201ENST00000384080 113 ntBASIC0.72□□□□□ -2.29
ALDH1A1P00352 MIR520D-201ENST00000385002 87 ntBASIC0.72□□□□□ -2.29
ALDH1A1P00352 SNORD19-201ENST00000391191 68 ntBASIC0.72□□□□□ -2.29
ALDH1A1P00352 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
ALDH1A1P00352 MIR548H2-201ENST00000408874 88 ntBASIC0.71□□□□□ -2.3
ALDH1A1P00352 MIR6854-201ENST00000614935 69 ntBASIC0.71□□□□□ -2.3
ALDH1A1P00352 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
ALDH1A1P00352 MIR148A-201ENST00000362215 68 ntBASIC0.69□□□□□ -2.3
ALDH1A1P00352 MIRLET7D-201ENST00000362263 87 ntBASIC0.69□□□□□ -2.3
ALDH1A1P00352 MIR643-201ENST00000385267 97 ntBASIC0.69□□□□□ -2.3
ALDH1A1P00352 RNU6-180P-201ENST00000516697 61 ntBASIC0.69□□□□□ -2.3
ALDH1A1P00352 MIR124-2-201ENST00000385081 109 ntBASIC0.68□□□□□ -2.3
ALDH1A1P00352 SNORA27.2-201ENST00000363365 126 ntBASIC0.67□□□□□ -2.3
ALDH1A1P00352 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
ALDH1A1P00352 SNORD56B-201ENST00000384713 71 ntBASIC0.66□□□□□ -2.3
ALDH1A1P00352 MIR548Q-201ENST00000408404 100 ntBASIC0.66□□□□□ -2.3
ALDH1A1P00352 AC114755.3-201ENST00000481111 251 ntBASIC0.66□□□□□ -2.3
ALDH1A1P00352 RNA5SP476-201ENST00000516613 103 ntBASIC0.66□□□□□ -2.3
ALDH1A1P00352 RNA5SP163-201ENST00000410304 99 ntBASIC0.65□□□□□ -2.31
ALDH1A1P00352 Y_RNA.699-201ENST00000516803 93 ntBASIC0.65□□□□□ -2.31
ALDH1A1P00352 AC069113.3-201ENST00000521019 150 ntBASIC0.65□□□□□ -2.31
ALDH1A1P00352 RNU6-1233P-201ENST00000362922 102 ntBASIC0.64□□□□□ -2.31
ALDH1A1P00352 VTRNA1-3-201ENST00000365645 89 ntBASIC0.64□□□□□ -2.31
ALDH1A1P00352 RNU6-1326P-201ENST00000391262 107 ntBASIC0.64□□□□□ -2.31
ALDH1A1P00352 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
ALDH1A1P00352 SNORA62.5-201ENST00000516634 120 ntBASIC0.63□□□□□ -2.31
ALDH1A1P00352 MIR2909-201ENST00000617113 69 ntBASIC0.63□□□□□ -2.31
ALDH1A1P00352 MIR4426-201ENST00000640330 63 ntBASIC0.62□□□□□ -2.31
ALDH1A1P00352 Y_RNA.345-201ENST00000365384 92 ntBASIC0.61□□□□□ -2.31
ALDH1A1P00352 MIR4317-201ENST00000637586 65 ntBASIC0.61□□□□□ -2.31
ALDH1A1P00352 RNU6-1047P-201ENST00000364418 107 ntBASIC0.6□□□□□ -2.31
ALDH1A1P00352 RNU6-901P-201ENST00000384593 106 ntBASIC0.6□□□□□ -2.31
ALDH1A1P00352 AC114737.2-201ENST00000421583 173 ntBASIC0.6□□□□□ -2.31
ALDH1A1P00352 AC244250.2-201ENST00000418731 148 ntBASIC0.59□□□□□ -2.31
ALDH1A1P00352 HAR1A.1-201ENST00000459583 118 ntBASIC0.59□□□□□ -2.31
ALDH1A1P00352 AP002795.1-201ENST00000534879 84 ntBASIC0.59□□□□□ -2.31
ALDH1A1P00352 SNORA50A-201ENST00000384225 134 ntBASIC0.58□□□□□ -2.32
ALDH1A1P00352 MIR892B-201ENST00000401279 77 ntBASIC0.58□□□□□ -2.32
ALDH1A1P00352 RNU6-361P-201ENST00000364454 107 ntBASIC0.57□□□□□ -2.32
ALDH1A1P00352 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
ALDH1A1P00352 RNA5SP63-201ENST00000391225 112 ntBASIC0.57□□□□□ -2.32
ALDH1A1P00352 MIR4280-201ENST00000582178 76 ntBASIC0.56□□□□□ -2.32
ALDH1A1P00352 AC138207.3-201ENST00000585289 166 ntBASIC0.56□□□□□ -2.32
ALDH1A1P00352 AC023932.2-201ENST00000603176 175 ntBASIC0.56□□□□□ -2.32
ALDH1A1P00352 MIR655-201ENST00000362159 97 ntBASIC0.55□□□□□ -2.32
ALDH1A1P00352 Y_RNA.206-201ENST00000364136 102 ntBASIC0.55□□□□□ -2.32
ALDH1A1P00352 RNA5SP285-201ENST00000516619 119 ntBASIC0.54□□□□□ -2.32
ALDH1A1P00352 MIR4514-201ENST00000581410 57 ntBASIC0.54□□□□□ -2.32
ALDH1A1P00352 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
ALDH1A1P00352 RNU6-608P-201ENST00000383927 104 ntBASIC0.53□□□□□ -2.32
ALDH1A1P00352 RNA5SP169-201ENST00000517268 117 ntBASIC0.53□□□□□ -2.32
ALDH1A1P00352 AC090625.1-201ENST00000357130 210 ntBASIC0.52□□□□□ -2.33
ALDH1A1P00352 RNU7-165P-201ENST00000458864 60 ntBASIC0.52□□□□□ -2.33
ALDH1A1P00352 MIR4743-201ENST00000584576 69 ntBASIC0.52□□□□□ -2.33
ALDH1A1P00352 RNU6-1327P-201ENST00000365302 105 ntBASIC0.51□□□□□ -2.33
ALDH1A1P00352 MIR593-201ENST00000384856 100 ntBASIC0.51□□□□□ -2.33
ALDH1A1P00352 MIR202-201ENST00000362219 110 ntBASIC0.5□□□□□ -2.33
ALDH1A1P00352 SNORA26.4-201ENST00000391188 123 ntBASIC0.5□□□□□ -2.33
ALDH1A1P00352 MIR5683-201ENST00000636514 76 ntBASIC0.5□□□□□ -2.33
ALDH1A1P00352 MIR4315-1-201ENST00000636800 73 ntBASIC0.5□□□□□ -2.33
ALDH1A1P00352 MIR4315-2-201ENST00000640925 73 ntBASIC0.5□□□□□ -2.33
ALDH1A1P00352 MIR610-201ENST00000385139 96 ntBASIC0.49□□□□□ -2.33
ALDH1A1P00352 RNY3P8-201ENST00000411366 126 ntBASIC0.49□□□□□ -2.33
ALDH1A1P00352 AL445193.1-201ENST00000441183 141 ntBASIC0.49□□□□□ -2.33
ALDH1A1P00352 RNU6-300P-201ENST00000459080 104 ntBASIC0.48□□□□□ -2.33
ALDH1A1P00352 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.47□□□□□ -2.33
ALDH1A1P00352 AL353691.2-201ENST00000443795 59 ntBASIC0.47□□□□□ -2.33
ALDH1A1P00352 MIR6851-201ENST00000617060 67 ntBASIC0.47□□□□□ -2.33
ALDH1A1P00352 MIR6086-201ENST00000638065 55 ntBASIC0.47□□□□□ -2.33
ALDH1A1P00352 MIR145-201ENST00000384967 88 ntBASIC0.46□□□□□ -2.34
ALDH1A1P00352 SNORA17.4-201ENST00000391287 132 ntBASIC0.46□□□□□ -2.34
ALDH1A1P00352 RNY1P9-201ENST00000532431 109 ntBASIC0.46□□□□□ -2.34
ALDH1A1P00352 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.45□□□□□ -2.34
ALDH1A1P00352 RNU7-159P-201ENST00000459284 62 ntBASIC0.45□□□□□ -2.34
ALDH1A1P00352 SNORD38.3-201ENST00000516599 73 ntBASIC0.45□□□□□ -2.34
ALDH1A1P00352 SNORD115-33-201ENST00000363723 82 ntBASIC0.44□□□□□ -2.34
ALDH1A1P00352 SNORD74.6-201ENST00000364796 70 ntBASIC0.44□□□□□ -2.34
ALDH1A1P00352 SNORD18.2-201ENST00000459604 70 ntBASIC0.44□□□□□ -2.34
ALDH1A1P00352 RNU6-894P-201ENST00000517094 105 ntBASIC0.41□□□□□ -2.34
ALDH1A1P00352 RNU6-176P-201ENST00000517196 105 ntBASIC0.41□□□□□ -2.34
ALDH1A1P00352 RNA5SP214-201ENST00000363378 118 ntBASIC0.39□□□□□ -2.35
ALDH1A1P00352 SNORD49B-201ENST00000365172 72 ntBASIC0.37□□□□□ -2.35
ALDH1A1P00352 RNU6-46P-201ENST00000383860 107 ntBASIC0.36□□□□□ -2.35
ALDH1A1P00352 MIR6759-201ENST00000638110 65 ntBASIC0.36□□□□□ -2.35
ALDH1A1P00352 SNORD114-9-201ENST00000364370 72 ntBASIC0.35□□□□□ -2.35
ALDH1A1P00352 MIR518B-201ENST00000385127 83 ntBASIC0.35□□□□□ -2.35
ALDH1A1P00352 SNORD111B-201ENST00000408587 80 ntBASIC0.35□□□□□ -2.35
ALDH1A1P00352 SNORD22.1-201ENST00000516331 125 ntBASIC0.35□□□□□ -2.35
ALDH1A1P00352 SNORD114-5-201ENST00000362928 70 ntBASIC0.34□□□□□ -2.36
ALDH1A1P00352 SNORD60-201ENST00000383903 83 ntBASIC0.34□□□□□ -2.36
ALDH1A1P00352 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
ALDH1A1P00352 AL590491.3-201ENST00000610731 82 ntBASIC0.34□□□□□ -2.36
ALDH1A1P00352 MIR6718-201ENST00000616153 80 ntBASIC0.34□□□□□ -2.36
ALDH1A1P00352 MIR548N-201ENST00000408742 75 ntBASIC0.33□□□□□ -2.36
ALDH1A1P00352 RNA5SP66-201ENST00000517178 101 ntBASIC0.33□□□□□ -2.36
ALDH1A1P00352 RNU6-929P-201ENST00000384429 107 ntBASIC0.32□□□□□ -2.36
ALDH1A1P00352 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
ALDH1A1P00352 SNORD114-17-201ENST00000364699 75 ntBASIC0.3□□□□□ -2.36
ALDH1A1P00352 RNU6-133P-201ENST00000383989 107 ntBASIC0.3□□□□□ -2.36
ALDH1A1P00352 SNORD75.1-201ENST00000408373 60 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 240.5 ms