Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.55□□□□□ -2.66
PDLIM1O00151 MIR630-201ENST00000384957 97 ntBASIC-1.55□□□□□ -2.66
PDLIM1O00151 MIR601-201ENST00000385256 79 ntBASIC-1.55□□□□□ -2.66
PDLIM1O00151 RNA5SP215-201ENST00000363440 122 ntBASIC-1.56□□□□□ -2.66
PDLIM1O00151 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.56□□□□□ -2.66
PDLIM1O00151 U4.4-201ENST00000620626 117 ntBASIC-1.56□□□□□ -2.66
PDLIM1O00151 MIR664A-201ENST00000626086 82 ntBASIC-1.56□□□□□ -2.66
PDLIM1O00151 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.57□□□□□ -2.66
PDLIM1O00151 RNU6-979P-201ENST00000383896 107 ntBASIC-1.57□□□□□ -2.66
PDLIM1O00151 SNORD45A-201ENST00000384512 84 ntBASIC-1.57□□□□□ -2.66
PDLIM1O00151 MIR1468-201ENST00000410600 86 ntBASIC-1.57□□□□□ -2.66
PDLIM1O00151 RPL35AP4-201ENST00000412007 102 ntBASIC-1.57□□□□□ -2.66
PDLIM1O00151 RNU7-134P-201ENST00000458997 64 ntBASIC-1.57□□□□□ -2.66
PDLIM1O00151 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.57□□□□□ -2.66
PDLIM1O00151 SNORD113-2-201ENST00000391082 72 ntBASIC-1.58□□□□□ -2.66
PDLIM1O00151 RNU6-706P-201ENST00000517229 104 ntBASIC-1.59□□□□□ -2.66
PDLIM1O00151 RNU6-164P-201ENST00000364604 103 ntBASIC-1.61□□□□□ -2.67
PDLIM1O00151 RNA5SP173-201ENST00000364857 136 ntBASIC-1.61□□□□□ -2.67
PDLIM1O00151 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.62□□□□□ -2.67
PDLIM1O00151 RNU7-171P-201ENST00000459581 62 ntBASIC-1.62□□□□□ -2.67
PDLIM1O00151 RNU6-598P-201ENST00000364017 105 ntBASIC-1.63□□□□□ -2.67
PDLIM1O00151 RNU6-242P-201ENST00000384359 107 ntBASIC-1.63□□□□□ -2.67
PDLIM1O00151 RNU6-70P-201ENST00000516438 60 ntBASIC-1.63□□□□□ -2.67
PDLIM1O00151 U2.22-201ENST00000636441 106 ntBASIC-1.63□□□□□ -2.67
PDLIM1O00151 RNU6-895P-201ENST00000384125 103 ntBASIC-1.64□□□□□ -2.67
PDLIM1O00151 MIR154-201ENST00000385243 84 ntBASIC-1.64□□□□□ -2.67
PDLIM1O00151 MIR1245B-201ENST00000636115 69 ntBASIC-1.64□□□□□ -2.67
PDLIM1O00151 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.65□□□□□ -2.67
PDLIM1O00151 RNU6-630P-201ENST00000391258 106 ntBASIC-1.65□□□□□ -2.67
PDLIM1O00151 AC090616.4-201ENST00000448026 115 ntBASIC-1.65□□□□□ -2.67
PDLIM1O00151 MIR494-201ENST00000349529 81 ntBASIC-1.66□□□□□ -2.68
PDLIM1O00151 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.66□□□□□ -2.68
PDLIM1O00151 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.66□□□□□ -2.68
PDLIM1O00151 MIR4712-201ENST00000583750 82 ntBASIC-1.66□□□□□ -2.68
PDLIM1O00151 AC138207.3-201ENST00000585289 166 ntBASIC-1.66□□□□□ -2.68
PDLIM1O00151 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.67□□□□□ -2.68
PDLIM1O00151 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.67□□□□□ -2.68
PDLIM1O00151 U2.18-201ENST00000622185 84 ntBASIC-1.67□□□□□ -2.68
PDLIM1O00151 MIR450A2-201ENST00000385022 100 ntBASIC-1.68□□□□□ -2.68
PDLIM1O00151 RNA5SP461-201ENST00000516451 104 ntBASIC-1.68□□□□□ -2.68
PDLIM1O00151 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.68□□□□□ -2.68
PDLIM1O00151 AC091912.2-201ENST00000624798 167 ntBASIC-1.68□□□□□ -2.68
PDLIM1O00151 SNORD116-16-201ENST00000384533 92 ntBASIC-1.69□□□□□ -2.68
PDLIM1O00151 MIR8485-201ENST00000401372 91 ntBASIC-1.69□□□□□ -2.68
PDLIM1O00151 MIR6874-201ENST00000635894 71 ntBASIC-1.69□□□□□ -2.68
PDLIM1O00151 RNU6-153P-201ENST00000364422 104 ntBASIC-1.7□□□□□ -2.68
PDLIM1O00151 RNU6-294P-201ENST00000364999 102 ntBASIC-1.7□□□□□ -2.68
PDLIM1O00151 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.7□□□□□ -2.68
PDLIM1O00151 MIR548AA1-201ENST00000384971 97 ntBASIC-1.71□□□□□ -2.68
PDLIM1O00151 AC018880.2-201ENST00000414265 201 ntBASIC-1.71□□□□□ -2.68
PDLIM1O00151 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.72□□□□□ -2.68
PDLIM1O00151 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.73□□□□□ -2.69
PDLIM1O00151 MIR889-201ENST00000401280 79 ntBASIC-1.73□□□□□ -2.69
PDLIM1O00151 HLA-S-202ENST00000425174 53 ntBASIC-1.73□□□□□ -2.69
PDLIM1O00151 RNA5SP180-201ENST00000516181 101 ntBASIC-1.73□□□□□ -2.69
PDLIM1O00151 SNORA41B-201ENST00000384785 128 ntBASIC-1.74□□□□□ -2.69
PDLIM1O00151 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.75□□□□□ -2.69
PDLIM1O00151 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.75□□□□□ -2.69
PDLIM1O00151 RNU6-608P-201ENST00000383927 104 ntBASIC-1.75□□□□□ -2.69
PDLIM1O00151 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.75□□□□□ -2.69
PDLIM1O00151 MIR365A-201ENST00000362260 87 ntBASIC-1.76□□□□□ -2.69
PDLIM1O00151 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.76□□□□□ -2.69
PDLIM1O00151 MIR1285-2-201ENST00000408311 88 ntBASIC-1.76□□□□□ -2.69
PDLIM1O00151 MIR4666B-201ENST00000578142 81 ntBASIC-1.76□□□□□ -2.69
PDLIM1O00151 SNORD116-24-201ENST00000384549 92 ntBASIC-1.77□□□□□ -2.69
PDLIM1O00151 MIR520D-201ENST00000385002 87 ntBASIC-1.77□□□□□ -2.69
PDLIM1O00151 RNU6-995P-201ENST00000391244 107 ntBASIC-1.77□□□□□ -2.69
PDLIM1O00151 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.77□□□□□ -2.69
PDLIM1O00151 MIR3170-201ENST00000582699 77 ntBASIC-1.77□□□□□ -2.69
PDLIM1O00151 RNU6-247P-201ENST00000362636 107 ntBASIC-1.78□□□□□ -2.69
PDLIM1O00151 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.78□□□□□ -2.69
PDLIM1O00151 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.78□□□□□ -2.69
PDLIM1O00151 MIR3134-201ENST00000579433 74 ntBASIC-1.78□□□□□ -2.69
PDLIM1O00151 MIR23C-201ENST00000579846 100 ntBASIC-1.78□□□□□ -2.69
PDLIM1O00151 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.78□□□□□ -2.69
PDLIM1O00151 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.78□□□□□ -2.69
PDLIM1O00151 SNORD115-31-201ENST00000365318 82 ntBASIC-1.79□□□□□ -2.7
PDLIM1O00151 RNU6-820P-201ENST00000384273 107 ntBASIC-1.79□□□□□ -2.7
PDLIM1O00151 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.79□□□□□ -2.7
PDLIM1O00151 MIR5591-201ENST00000578248 65 ntBASIC-1.79□□□□□ -2.7
PDLIM1O00151 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.79□□□□□ -2.7
PDLIM1O00151 SNORD1B-201ENST00000363091 84 ntBASIC-1.8□□□□□ -2.7
PDLIM1O00151 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.8□□□□□ -2.7
PDLIM1O00151 MIR5582-201ENST00000579697 68 ntBASIC-1.8□□□□□ -2.7
PDLIM1O00151 MIR4441-201ENST00000582623 100 ntBASIC-1.8□□□□□ -2.7
PDLIM1O00151 U4.2-201ENST00000618561 85 ntBASIC-1.8□□□□□ -2.7
PDLIM1O00151 MIR4723-201ENST00000585070 81 ntBASIC-1.81□□□□□ -2.7
PDLIM1O00151 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.83□□□□□ -2.7
PDLIM1O00151 RNU6-542P-201ENST00000516405 103 ntBASIC-1.83□□□□□ -2.7
PDLIM1O00151 RNU6-687P-201ENST00000516443 89 ntBASIC-1.83□□□□□ -2.7
PDLIM1O00151 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.83□□□□□ -2.7
PDLIM1O00151 MIR4520-1-201ENST00000582609 70 ntBASIC-1.83□□□□□ -2.7
PDLIM1O00151 RNU6-411P-201ENST00000384451 107 ntBASIC-1.84□□□□□ -2.7
PDLIM1O00151 RNU7-151P-201ENST00000516930 53 ntBASIC-1.84□□□□□ -2.7
PDLIM1O00151 MIR4770-201ENST00000579149 58 ntBASIC-1.84□□□□□ -2.7
PDLIM1O00151 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.84□□□□□ -2.7
PDLIM1O00151 MIR6502-201ENST00000617296 76 ntBASIC-1.84□□□□□ -2.7
PDLIM1O00151 SNORD114-3-201ENST00000364969 75 ntBASIC-1.85□□□□□ -2.71
PDLIM1O00151 RNU6-787P-201ENST00000384032 107 ntBASIC-1.86□□□□□ -2.71
PDLIM1O00151 MIR579-201ENST00000385221 98 ntBASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 328.4 ms