Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.39□□□□□ -2.63
NPIPA2E9PIF3 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.39□□□□□ -2.63
NPIPA2E9PIF3 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.39□□□□□ -2.63
NPIPA2E9PIF3 RNU6-315P-201ENST00000362666 107 ntBASIC-1.4□□□□□ -2.63
NPIPA2E9PIF3 RNU6-164P-201ENST00000364604 103 ntBASIC-1.4□□□□□ -2.63
NPIPA2E9PIF3 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.4□□□□□ -2.63
NPIPA2E9PIF3 U4.4-201ENST00000620626 117 ntBASIC-1.4□□□□□ -2.63
NPIPA2E9PIF3 RNY4P27-201ENST00000363341 96 ntBASIC-1.41□□□□□ -2.64
NPIPA2E9PIF3 SNORD114-3-201ENST00000364969 75 ntBASIC-1.41□□□□□ -2.64
NPIPA2E9PIF3 RNU6-540P-201ENST00000384622 101 ntBASIC-1.41□□□□□ -2.64
NPIPA2E9PIF3 AL603908.1-201ENST00000406098 201 ntBASIC-1.41□□□□□ -2.64
NPIPA2E9PIF3 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.41□□□□□ -2.64
NPIPA2E9PIF3 RNA5SP215-201ENST00000363440 122 ntBASIC-1.42□□□□□ -2.64
NPIPA2E9PIF3 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.42□□□□□ -2.64
NPIPA2E9PIF3 SNORD20-201ENST00000384550 80 ntBASIC-1.42□□□□□ -2.64
NPIPA2E9PIF3 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.42□□□□□ -2.64
NPIPA2E9PIF3 MIR548V-201ENST00000584165 80 ntBASIC-1.42□□□□□ -2.64
NPIPA2E9PIF3 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.43□□□□□ -2.64
NPIPA2E9PIF3 RNU6-668P-201ENST00000364180 107 ntBASIC-1.43□□□□□ -2.64
NPIPA2E9PIF3 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.43□□□□□ -2.64
NPIPA2E9PIF3 MIR8485-201ENST00000401372 91 ntBASIC-1.44□□□□□ -2.64
NPIPA2E9PIF3 RPL35AP4-201ENST00000412007 102 ntBASIC-1.44□□□□□ -2.64
NPIPA2E9PIF3 SNORD113.1-201ENST00000363280 73 ntBASIC-1.45□□□□□ -2.64
NPIPA2E9PIF3 RNY1P1-201ENST00000364372 112 ntBASIC-1.45□□□□□ -2.64
NPIPA2E9PIF3 RNA5SP173-201ENST00000364857 136 ntBASIC-1.45□□□□□ -2.64
NPIPA2E9PIF3 MIR4770-201ENST00000579149 58 ntBASIC-1.45□□□□□ -2.64
NPIPA2E9PIF3 MIR5588-201ENST00000581890 63 ntBASIC-1.45□□□□□ -2.64
NPIPA2E9PIF3 IGLL4P-201ENST00000614590 133 ntBASIC-1.45□□□□□ -2.64
NPIPA2E9PIF3 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.46□□□□□ -2.64
NPIPA2E9PIF3 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.46□□□□□ -2.64
NPIPA2E9PIF3 SNORD113-2-201ENST00000391082 72 ntBASIC-1.46□□□□□ -2.64
NPIPA2E9PIF3 RNU6-789P-201ENST00000517105 102 ntBASIC-1.46□□□□□ -2.64
NPIPA2E9PIF3 AC091912.2-201ENST00000624798 167 ntBASIC-1.46□□□□□ -2.64
NPIPA2E9PIF3 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.47□□□□□ -2.64
NPIPA2E9PIF3 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.47□□□□□ -2.64
NPIPA2E9PIF3 AC090616.4-201ENST00000448026 115 ntBASIC-1.47□□□□□ -2.64
NPIPA2E9PIF3 RNU6-168P-201ENST00000516189 101 ntBASIC-1.47□□□□□ -2.64
NPIPA2E9PIF3 MIR4723-201ENST00000585070 81 ntBASIC-1.47□□□□□ -2.64
NPIPA2E9PIF3 RNU6-598P-201ENST00000364017 105 ntBASIC-1.48□□□□□ -2.65
NPIPA2E9PIF3 SNORD45A-201ENST00000384512 84 ntBASIC-1.48□□□□□ -2.65
NPIPA2E9PIF3 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.48□□□□□ -2.65
NPIPA2E9PIF3 MIR630-201ENST00000384957 97 ntBASIC-1.48□□□□□ -2.65
NPIPA2E9PIF3 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.49□□□□□ -2.65
NPIPA2E9PIF3 RNU6-49P-201ENST00000384256 107 ntBASIC-1.49□□□□□ -2.65
NPIPA2E9PIF3 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.49□□□□□ -2.65
NPIPA2E9PIF3 RNU6-630P-201ENST00000391258 106 ntBASIC-1.49□□□□□ -2.65
NPIPA2E9PIF3 MIR1207-201ENST00000408249 87 ntBASIC-1.49□□□□□ -2.65
NPIPA2E9PIF3 RNU6-979P-201ENST00000383896 107 ntBASIC-1.5□□□□□ -2.65
NPIPA2E9PIF3 SNORD116-16-201ENST00000384533 92 ntBASIC-1.5□□□□□ -2.65
NPIPA2E9PIF3 RNU6-983P-201ENST00000516004 103 ntBASIC-1.5□□□□□ -2.65
NPIPA2E9PIF3 MIR6874-201ENST00000635894 71 ntBASIC-1.5□□□□□ -2.65
NPIPA2E9PIF3 RNU6-44P-201ENST00000384045 107 ntBASIC-1.51□□□□□ -2.65
NPIPA2E9PIF3 MIR889-201ENST00000401280 79 ntBASIC-1.51□□□□□ -2.65
NPIPA2E9PIF3 RNA5SP89-201ENST00000410300 108 ntBASIC-1.51□□□□□ -2.65
NPIPA2E9PIF3 AC018880.2-201ENST00000414265 201 ntBASIC-1.51□□□□□ -2.65
NPIPA2E9PIF3 MIR664A-201ENST00000626086 82 ntBASIC-1.51□□□□□ -2.65
NPIPA2E9PIF3 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.52□□□□□ -2.65
NPIPA2E9PIF3 U2.18-201ENST00000622185 84 ntBASIC-1.52□□□□□ -2.65
NPIPA2E9PIF3 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.53□□□□□ -2.65
NPIPA2E9PIF3 RNU7-171P-201ENST00000459581 62 ntBASIC-1.53□□□□□ -2.65
NPIPA2E9PIF3 RNU6-406P-201ENST00000516470 107 ntBASIC-1.53□□□□□ -2.65
NPIPA2E9PIF3 MIR4712-201ENST00000583750 82 ntBASIC-1.53□□□□□ -2.65
NPIPA2E9PIF3 RNU6-608P-201ENST00000383927 104 ntBASIC-1.54□□□□□ -2.66
NPIPA2E9PIF3 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.54□□□□□ -2.66
NPIPA2E9PIF3 MIR548AI-201ENST00000579940 88 ntBASIC-1.54□□□□□ -2.66
NPIPA2E9PIF3 MIR1245B-201ENST00000636115 69 ntBASIC-1.54□□□□□ -2.66
NPIPA2E9PIF3 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.55□□□□□ -2.66
NPIPA2E9PIF3 MIR548AA1-201ENST00000384971 97 ntBASIC-1.55□□□□□ -2.66
NPIPA2E9PIF3 MIR520D-201ENST00000385002 87 ntBASIC-1.55□□□□□ -2.66
NPIPA2E9PIF3 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.55□□□□□ -2.66
NPIPA2E9PIF3 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.56□□□□□ -2.66
NPIPA2E9PIF3 MIR154-201ENST00000385243 84 ntBASIC-1.56□□□□□ -2.66
NPIPA2E9PIF3 RNU6-400P-201ENST00000391173 106 ntBASIC-1.56□□□□□ -2.66
NPIPA2E9PIF3 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.56□□□□□ -2.66
NPIPA2E9PIF3 MIR23C-201ENST00000579846 100 ntBASIC-1.56□□□□□ -2.66
NPIPA2E9PIF3 MIR4520-1-201ENST00000582609 70 ntBASIC-1.56□□□□□ -2.66
NPIPA2E9PIF3 RNU6-895P-201ENST00000384125 103 ntBASIC-1.57□□□□□ -2.66
NPIPA2E9PIF3 MIR6502-201ENST00000617296 76 ntBASIC-1.57□□□□□ -2.66
NPIPA2E9PIF3 SNORD1B-201ENST00000363091 84 ntBASIC-1.58□□□□□ -2.66
NPIPA2E9PIF3 RNU6-70P-201ENST00000516438 60 ntBASIC-1.58□□□□□ -2.66
NPIPA2E9PIF3 RNU6-242P-201ENST00000384359 107 ntBASIC-1.59□□□□□ -2.66
NPIPA2E9PIF3 SNORA41B-201ENST00000384785 128 ntBASIC-1.59□□□□□ -2.66
NPIPA2E9PIF3 MIR3170-201ENST00000582699 77 ntBASIC-1.59□□□□□ -2.66
NPIPA2E9PIF3 RNY4P30-201ENST00000410216 95 ntBASIC-1.6□□□□□ -2.67
NPIPA2E9PIF3 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.6□□□□□ -2.67
NPIPA2E9PIF3 RNU6-79P-201ENST00000362511 107 ntBASIC-1.61□□□□□ -2.67
NPIPA2E9PIF3 RNU6-247P-201ENST00000362636 107 ntBASIC-1.61□□□□□ -2.67
NPIPA2E9PIF3 SNORD18.1-201ENST00000363807 70 ntBASIC-1.62□□□□□ -2.67
NPIPA2E9PIF3 SNORD116-24-201ENST00000384549 92 ntBASIC-1.62□□□□□ -2.67
NPIPA2E9PIF3 MIR496-201ENST00000385226 102 ntBASIC-1.62□□□□□ -2.67
NPIPA2E9PIF3 RNA5SP86-201ENST00000390869 98 ntBASIC-1.62□□□□□ -2.67
NPIPA2E9PIF3 RNU6-995P-201ENST00000391244 107 ntBASIC-1.62□□□□□ -2.67
NPIPA2E9PIF3 MIR494-201ENST00000349529 81 ntBASIC-1.63□□□□□ -2.67
NPIPA2E9PIF3 RNU6-153P-201ENST00000364422 104 ntBASIC-1.63□□□□□ -2.67
NPIPA2E9PIF3 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.63□□□□□ -2.67
NPIPA2E9PIF3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.63□□□□□ -2.67
NPIPA2E9PIF3 MIR450A2-201ENST00000385022 100 ntBASIC-1.64□□□□□ -2.67
NPIPA2E9PIF3 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.64□□□□□ -2.67
NPIPA2E9PIF3 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.64□□□□□ -2.67
NPIPA2E9PIF3 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms