Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MIR1302-3-201ENST00000408128 138 ntBASIC-1.87□□□□□ -2.71
RHBDD3Q9Y3P4 RNU6-257P-201ENST00000410238 98 ntBASIC-1.87□□□□□ -2.71
RHBDD3Q9Y3P4 MIR4503-201ENST00000582187 83 ntBASIC-1.87□□□□□ -2.71
RHBDD3Q9Y3P4 U7.3-201ENST00000616123 62 ntBASIC-1.87□□□□□ -2.71
RHBDD3Q9Y3P4 RNU6-109P-201ENST00000516364 107 ntBASIC-1.88□□□□□ -2.71
RHBDD3Q9Y3P4 RNU6-184P-201ENST00000516514 107 ntBASIC-1.88□□□□□ -2.71
RHBDD3Q9Y3P4 RNU6-980P-201ENST00000516925 103 ntBASIC-1.88□□□□□ -2.71
RHBDD3Q9Y3P4 MIR548AM-201ENST00000584298 74 ntBASIC-1.88□□□□□ -2.71
RHBDD3Q9Y3P4 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.89□□□□□ -2.71
RHBDD3Q9Y3P4 MIR519C-201ENST00000385053 87 ntBASIC-1.89□□□□□ -2.71
RHBDD3Q9Y3P4 RNU6-971P-201ENST00000516920 106 ntBASIC-1.89□□□□□ -2.71
RHBDD3Q9Y3P4 MIR23C-201ENST00000579846 100 ntBASIC-1.89□□□□□ -2.71
RHBDD3Q9Y3P4 MIR3675-201ENST00000583661 73 ntBASIC-1.89□□□□□ -2.71
RHBDD3Q9Y3P4 MIR548V-201ENST00000584165 80 ntBASIC-1.89□□□□□ -2.71
RHBDD3Q9Y3P4 RNU6-698P-201ENST00000363523 107 ntBASIC-1.9□□□□□ -2.71
RHBDD3Q9Y3P4 RNU6-200P-201ENST00000364743 107 ntBASIC-1.9□□□□□ -2.71
RHBDD3Q9Y3P4 RNU6-34P-201ENST00000364874 107 ntBASIC-1.9□□□□□ -2.71
RHBDD3Q9Y3P4 RNU6-841P-201ENST00000383872 107 ntBASIC-1.9□□□□□ -2.71
RHBDD3Q9Y3P4 MIR630-201ENST00000384957 97 ntBASIC-1.9□□□□□ -2.71
RHBDD3Q9Y3P4 RNU6-604P-201ENST00000390917 100 ntBASIC-1.9□□□□□ -2.71
RHBDD3Q9Y3P4 AC013734.1-201ENST00000619329 111 ntBASIC-1.9□□□□□ -2.71
RHBDD3Q9Y3P4 RNU6-867P-201ENST00000364956 107 ntBASIC-1.91□□□□□ -2.72
RHBDD3Q9Y3P4 SNORA40-201ENST00000388090 126 ntBASIC-1.91□□□□□ -2.72
RHBDD3Q9Y3P4 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.91□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.91□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.92□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.92□□□□□ -2.72
RHBDD3Q9Y3P4 SNORD113-2-201ENST00000391082 72 ntBASIC-1.92□□□□□ -2.72
RHBDD3Q9Y3P4 RNU4-88P-201ENST00000411220 86 ntBASIC-1.92□□□□□ -2.72
RHBDD3Q9Y3P4 RNA5SP405-201ENST00000363059 114 ntBASIC-1.93□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.93□□□□□ -2.72
RHBDD3Q9Y3P4 SNORD45.1-201ENST00000363181 77 ntBASIC-1.93□□□□□ -2.72
RHBDD3Q9Y3P4 RNU6-624P-201ENST00000363411 107 ntBASIC-1.93□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.93□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.93□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.93□□□□□ -2.72
RHBDD3Q9Y3P4 MIR3139-201ENST00000579145 76 ntBASIC-1.93□□□□□ -2.72
RHBDD3Q9Y3P4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.93□□□□□ -2.72
RHBDD3Q9Y3P4 AC005520.4-201ENST00000604337 90 ntBASIC-1.93□□□□□ -2.72
RHBDD3Q9Y3P4 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.93□□□□□ -2.72
RHBDD3Q9Y3P4 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.93□□□□□ -2.72
RHBDD3Q9Y3P4 MIR429-201ENST00000362106 83 ntBASIC-1.94□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.95□□□□□ -2.72
RHBDD3Q9Y3P4 SNORD115-31-201ENST00000365318 82 ntBASIC-1.95□□□□□ -2.72
RHBDD3Q9Y3P4 SNORA41B-201ENST00000384785 128 ntBASIC-1.95□□□□□ -2.72
RHBDD3Q9Y3P4 MIR548AA1-201ENST00000384971 97 ntBASIC-1.95□□□□□ -2.72
RHBDD3Q9Y3P4 RNU6-659P-201ENST00000516454 104 ntBASIC-1.95□□□□□ -2.72
RHBDD3Q9Y3P4 U6.97-201ENST00000636904 101 ntBASIC-1.95□□□□□ -2.72
RHBDD3Q9Y3P4 RNU6-766P-201ENST00000362478 107 ntBASIC-1.96□□□□□ -2.72
RHBDD3Q9Y3P4 RNU6-797P-201ENST00000363101 109 ntBASIC-1.96□□□□□ -2.72
RHBDD3Q9Y3P4 SNORA8.1-201ENST00000384250 140 ntBASIC-1.96□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.96□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.96□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.96□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.96□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.96□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.96□□□□□ -2.72
RHBDD3Q9Y3P4 U6.95-201ENST00000636931 70 ntBASIC-1.96□□□□□ -2.72
RHBDD3Q9Y3P4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.96□□□□□ -2.72
RHBDD3Q9Y3P4 RNU6-247P-201ENST00000362636 107 ntBASIC-1.97□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.97□□□□□ -2.72
RHBDD3Q9Y3P4 RNU6-379P-201ENST00000363813 104 ntBASIC-1.97□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.97□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.97□□□□□ -2.72
RHBDD3Q9Y3P4 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.97□□□□□ -2.72
RHBDD3Q9Y3P4 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.97□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.97□□□□□ -2.72
RHBDD3Q9Y3P4 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.97□□□□□ -2.72
RHBDD3Q9Y3P4 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.97□□□□□ -2.72
RHBDD3Q9Y3P4 RNU6-633P-201ENST00000362612 103 ntBASIC-1.98□□□□□ -2.73
RHBDD3Q9Y3P4 SNORD1B-201ENST00000363091 84 ntBASIC-1.98□□□□□ -2.73
RHBDD3Q9Y3P4 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.98□□□□□ -2.73
RHBDD3Q9Y3P4 SNORD116-21-201ENST00000384507 92 ntBASIC-1.98□□□□□ -2.73
RHBDD3Q9Y3P4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.98□□□□□ -2.73
RHBDD3Q9Y3P4 RNU6-388P-201ENST00000517012 105 ntBASIC-1.98□□□□□ -2.73
RHBDD3Q9Y3P4 RNU6-389P-201ENST00000517048 105 ntBASIC-1.98□□□□□ -2.73
RHBDD3Q9Y3P4 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.99□□□□□ -2.73
RHBDD3Q9Y3P4 SNORD116-16-201ENST00000384533 92 ntBASIC-1.99□□□□□ -2.73
RHBDD3Q9Y3P4 MIR579-201ENST00000385221 98 ntBASIC-1.99□□□□□ -2.73
RHBDD3Q9Y3P4 AC074348.1-201ENST00000426503 132 ntBASIC-1.99□□□□□ -2.73
RHBDD3Q9Y3P4 RNU6-346P-201ENST00000516288 111 ntBASIC-1.99□□□□□ -2.73
RHBDD3Q9Y3P4 RNU7-151P-201ENST00000516930 53 ntBASIC-1.99□□□□□ -2.73
RHBDD3Q9Y3P4 RNU6-303P-201ENST00000517091 106 ntBASIC-1.99□□□□□ -2.73
RHBDD3Q9Y3P4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.99□□□□□ -2.73
RHBDD3Q9Y3P4 Y_RNA.93-201ENST00000363066 109 ntBASIC-2□□□□□ -2.73
RHBDD3Q9Y3P4 RNU6-669P-201ENST00000365575 107 ntBASIC-2.01□□□□□ -2.73
RHBDD3Q9Y3P4 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.01□□□□□ -2.73
RHBDD3Q9Y3P4 RNU6-974P-201ENST00000384099 108 ntBASIC-2.01□□□□□ -2.73
RHBDD3Q9Y3P4 MT-TM-201ENST00000387377 68 ntBASIC-2.01□□□□□ -2.73
RHBDD3Q9Y3P4 RNY3P8-201ENST00000411366 126 ntBASIC-2.01□□□□□ -2.73
RHBDD3Q9Y3P4 snoU13.10-201ENST00000459301 103 ntBASIC-2.01□□□□□ -2.73
RHBDD3Q9Y3P4 AC093729.1-201ENST00000513074 128 ntBASIC-2.01□□□□□ -2.73
RHBDD3Q9Y3P4 RNU7-200P-201ENST00000516105 62 ntBASIC-2.01□□□□□ -2.73
RHBDD3Q9Y3P4 RNU6-327P-201ENST00000516270 127 ntBASIC-2.01□□□□□ -2.73
RHBDD3Q9Y3P4 MIR548W-201ENST00000581970 74 ntBASIC-2.01□□□□□ -2.73
RHBDD3Q9Y3P4 MIR4668-201ENST00000582284 70 ntBASIC-2.01□□□□□ -2.73
RHBDD3Q9Y3P4 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.01□□□□□ -2.73
RHBDD3Q9Y3P4 SNORD115-37-201ENST00000363768 82 ntBASIC-2.02□□□□□ -2.73
RHBDD3Q9Y3P4 RNY4P7-201ENST00000364600 96 ntBASIC-2.02□□□□□ -2.73
RHBDD3Q9Y3P4 RNU6-196P-201ENST00000384315 107 ntBASIC-2.02□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 329.5 ms