Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6-900P-201ENST00000384498 102 ntBASIC0.33□□□□□ -2.36
SSU72Q9NP77 RNU6-520P-201ENST00000384717 104 ntBASIC0.33□□□□□ -2.36
SSU72Q9NP77 MIR593-201ENST00000384856 100 ntBASIC0.33□□□□□ -2.36
SSU72Q9NP77 RNA5SP436-201ENST00000516020 115 ntBASIC0.33□□□□□ -2.36
SSU72Q9NP77 AC104408.1-201ENST00000605241 170 ntBASIC0.33□□□□□ -2.36
SSU72Q9NP77 MIR6888-201ENST00000621977 67 ntBASIC0.33□□□□□ -2.36
SSU72Q9NP77 AL391099.1-201ENST00000624635 187 ntBASIC0.33□□□□□ -2.36
SSU72Q9NP77 RNU6-973P-201ENST00000364690 107 ntBASIC0.32□□□□□ -2.36
SSU72Q9NP77 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
SSU72Q9NP77 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
SSU72Q9NP77 MIR148A-201ENST00000362215 68 ntBASIC0.31□□□□□ -2.36
SSU72Q9NP77 RNU6-1312P-201ENST00000362425 108 ntBASIC0.31□□□□□ -2.36
SSU72Q9NP77 RNU6-455P-201ENST00000384681 107 ntBASIC0.31□□□□□ -2.36
SSU72Q9NP77 MIR7978-201ENST00000636158 59 ntBASIC0.31□□□□□ -2.36
SSU72Q9NP77 SNORA42.1-201ENST00000363515 137 ntBASIC0.3□□□□□ -2.36
SSU72Q9NP77 MIR145-201ENST00000384967 88 ntBASIC0.3□□□□□ -2.36
SSU72Q9NP77 AC096531.1-201ENST00000419107 107 ntBASIC0.3□□□□□ -2.36
SSU72Q9NP77 RNU7-165P-201ENST00000458864 60 ntBASIC0.3□□□□□ -2.36
SSU72Q9NP77 MIR1273G-201ENST00000577677 100 ntBASIC0.3□□□□□ -2.36
SSU72Q9NP77 AC108676.2-201ENST00000605225 163 ntBASIC0.3□□□□□ -2.36
SSU72Q9NP77 snoR1.1-201ENST00000628177 80 ntBASIC0.3□□□□□ -2.36
SSU72Q9NP77 RNA5SP214-201ENST00000363378 118 ntBASIC0.29□□□□□ -2.36
SSU72Q9NP77 RNU6-598P-201ENST00000364017 105 ntBASIC0.29□□□□□ -2.36
SSU72Q9NP77 MIR892B-201ENST00000401279 77 ntBASIC0.29□□□□□ -2.36
SSU72Q9NP77 SNORA40.16-201ENST00000517238 121 ntBASIC0.29□□□□□ -2.36
SSU72Q9NP77 MIR4743-201ENST00000584576 69 ntBASIC0.29□□□□□ -2.36
SSU72Q9NP77 MIR655-201ENST00000362159 97 ntBASIC0.28□□□□□ -2.36
SSU72Q9NP77 SNORD114-9-201ENST00000364370 72 ntBASIC0.28□□□□□ -2.36
SSU72Q9NP77 MIR610-201ENST00000385139 96 ntBASIC0.28□□□□□ -2.36
SSU72Q9NP77 RNA5SP193-201ENST00000410353 107 ntBASIC0.28□□□□□ -2.36
SSU72Q9NP77 AC244250.2-201ENST00000418731 148 ntBASIC0.28□□□□□ -2.36
SSU72Q9NP77 RNU7-119P-201ENST00000459279 63 ntBASIC0.28□□□□□ -2.36
SSU72Q9NP77 AL445584.3-201ENST00000617173 78 ntBASIC0.28□□□□□ -2.36
SSU72Q9NP77 MIR7110-201ENST00000612638 86 ntBASIC0.27□□□□□ -2.37
SSU72Q9NP77 MIR924-201ENST00000638017 53 ntBASIC0.27□□□□□ -2.37
SSU72Q9NP77 RNU6-172P-201ENST00000411000 93 ntBASIC0.26□□□□□ -2.37
SSU72Q9NP77 MIR5704-201ENST00000584029 77 ntBASIC0.26□□□□□ -2.37
SSU72Q9NP77 MIR6779-201ENST00000617283 64 ntBASIC0.26□□□□□ -2.37
SSU72Q9NP77 MIR8068-201ENST00000618032 68 ntBASIC0.26□□□□□ -2.37
SSU72Q9NP77 SNORD116.2-201ENST00000391251 93 ntBASIC0.25□□□□□ -2.37
SSU72Q9NP77 RNU6-141P-201ENST00000410499 105 ntBASIC0.25□□□□□ -2.37
SSU72Q9NP77 RNU6-1133P-201ENST00000410963 100 ntBASIC0.25□□□□□ -2.37
SSU72Q9NP77 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
SSU72Q9NP77 SNORD56B-201ENST00000384713 71 ntBASIC0.24□□□□□ -2.37
SSU72Q9NP77 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
SSU72Q9NP77 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.24□□□□□ -2.37
SSU72Q9NP77 U2.18-201ENST00000622185 84 ntBASIC0.23□□□□□ -2.37
SSU72Q9NP77 MIR429-201ENST00000362106 83 ntBASIC0.22□□□□□ -2.37
SSU72Q9NP77 MIR330-201ENST00000362196 94 ntBASIC0.22□□□□□ -2.37
SSU72Q9NP77 SNORD114-5-201ENST00000362928 70 ntBASIC0.22□□□□□ -2.37
SSU72Q9NP77 RNU6-810P-201ENST00000364001 107 ntBASIC0.22□□□□□ -2.37
SSU72Q9NP77 SNORA62.4-201ENST00000365504 151 ntBASIC0.22□□□□□ -2.37
SSU72Q9NP77 RNU7-159P-201ENST00000459284 62 ntBASIC0.21□□□□□ -2.38
SSU72Q9NP77 RNU6-1262P-201ENST00000516217 96 ntBASIC0.21□□□□□ -2.38
SSU72Q9NP77 MIR8087-201ENST00000612745 78 ntBASIC0.21□□□□□ -2.38
SSU72Q9NP77 SNORA40B-201ENST00000385573 128 ntBASIC0.2□□□□□ -2.38
SSU72Q9NP77 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
SSU72Q9NP77 AC114755.3-201ENST00000481111 251 ntBASIC0.2□□□□□ -2.38
SSU72Q9NP77 U7.5-201ENST00000517224 61 ntBASIC0.2□□□□□ -2.38
SSU72Q9NP77 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.19□□□□□ -2.38
SSU72Q9NP77 RNU6-936P-201ENST00000384005 107 ntBASIC0.18□□□□□ -2.38
SSU72Q9NP77 RNU6-1184P-201ENST00000384588 108 ntBASIC0.18□□□□□ -2.38
SSU72Q9NP77 MIR1295A-201ENST00000408463 79 ntBASIC0.18□□□□□ -2.38
SSU72Q9NP77 Y_RNA.722-201ENST00000517279 114 ntBASIC0.18□□□□□ -2.38
SSU72Q9NP77 MIR4280-201ENST00000582178 76 ntBASIC0.18□□□□□ -2.38
SSU72Q9NP77 MIR4490-201ENST00000582647 84 ntBASIC0.18□□□□□ -2.38
SSU72Q9NP77 AC023932.2-201ENST00000603176 175 ntBASIC0.18□□□□□ -2.38
SSU72Q9NP77 RNA5SP457-201ENST00000363657 124 ntBASIC0.17□□□□□ -2.38
SSU72Q9NP77 RNU6-929P-201ENST00000384429 107 ntBASIC0.17□□□□□ -2.38
SSU72Q9NP77 RNU7-88P-201ENST00000458752 63 ntBASIC0.17□□□□□ -2.38
SSU72Q9NP77 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
SSU72Q9NP77 MIR6854-201ENST00000614935 69 ntBASIC0.17□□□□□ -2.38
SSU72Q9NP77 RNU6-696P-201ENST00000390834 107 ntBASIC0.16□□□□□ -2.38
SSU72Q9NP77 MIR4514-201ENST00000581410 57 ntBASIC0.16□□□□□ -2.38
SSU72Q9NP77 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.15□□□□□ -2.39
SSU72Q9NP77 MIR579-201ENST00000385221 98 ntBASIC0.15□□□□□ -2.39
SSU72Q9NP77 RNU7-151P-201ENST00000516930 53 ntBASIC0.15□□□□□ -2.39
SSU72Q9NP77 RNU6-1174P-201ENST00000517278 101 ntBASIC0.15□□□□□ -2.39
SSU72Q9NP77 Y_RNA.115-201ENST00000363272 98 ntBASIC0.14□□□□□ -2.39
SSU72Q9NP77 RNU6-980P-201ENST00000516925 103 ntBASIC0.14□□□□□ -2.39
SSU72Q9NP77 RNA5SP330-201ENST00000517096 96 ntBASIC0.14□□□□□ -2.39
SSU72Q9NP77 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
SSU72Q9NP77 MIR4290-201ENST00000583807 95 ntBASIC0.13□□□□□ -2.39
SSU72Q9NP77 RNU6-901P-201ENST00000384593 106 ntBASIC0.12□□□□□ -2.39
SSU72Q9NP77 RNA5SP63-201ENST00000391225 112 ntBASIC0.12□□□□□ -2.39
SSU72Q9NP77 SNORD57-201ENST00000448188 72 ntBASIC0.12□□□□□ -2.39
SSU72Q9NP77 RNU6-46P-201ENST00000383860 107 ntBASIC0.11□□□□□ -2.39
SSU72Q9NP77 Y_RNA.613-201ENST00000410726 97 ntBASIC0.11□□□□□ -2.39
SSU72Q9NP77 MIR124-2-201ENST00000385081 109 ntBASIC0.1□□□□□ -2.39
SSU72Q9NP77 RNU6-808P-201ENST00000391233 108 ntBASIC0.1□□□□□ -2.39
SSU72Q9NP77 SNORD49B-201ENST00000365172 72 ntBASIC0.09□□□□□ -2.4
SSU72Q9NP77 MIR548AA1-201ENST00000384971 97 ntBASIC0.09□□□□□ -2.4
SSU72Q9NP77 MIR1197-201ENST00000408818 88 ntBASIC0.09□□□□□ -2.4
SSU72Q9NP77 RNU6-1267P-201ENST00000410747 107 ntBASIC0.09□□□□□ -2.4
SSU72Q9NP77 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.09□□□□□ -2.4
SSU72Q9NP77 RNU6-924P-201ENST00000362926 108 ntBASIC0.08□□□□□ -2.4
SSU72Q9NP77 AL445193.1-201ENST00000441183 141 ntBASIC0.08□□□□□ -2.4
SSU72Q9NP77 MIR548X-201ENST00000580069 75 ntBASIC0.08□□□□□ -2.4
SSU72Q9NP77 AL590491.3-201ENST00000610731 82 ntBASIC0.08□□□□□ -2.4
SSU72Q9NP77 MIR125B1-201ENST00000385236 88 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 198.5 ms