Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU6-180P-201ENST00000516697 61 ntBASIC0.25□□□□□ -2.37
EBF3Q9H4W6 AL353803.5-201ENST00000599815 141 ntBASIC0.25□□□□□ -2.37
EBF3Q9H4W6 MIR6507-201ENST00000613630 70 ntBASIC0.25□□□□□ -2.37
EBF3Q9H4W6 MIR4315-1-201ENST00000636800 73 ntBASIC0.25□□□□□ -2.37
EBF3Q9H4W6 MIR4315-2-201ENST00000640925 73 ntBASIC0.25□□□□□ -2.37
EBF3Q9H4W6 RNA5SP163-201ENST00000410304 99 ntBASIC0.24□□□□□ -2.37
EBF3Q9H4W6 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.24□□□□□ -2.37
EBF3Q9H4W6 Y_RNA.698-201ENST00000516798 118 ntBASIC0.24□□□□□ -2.37
EBF3Q9H4W6 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
EBF3Q9H4W6 MIR6718-201ENST00000616153 80 ntBASIC0.24□□□□□ -2.37
EBF3Q9H4W6 Y_RNA.109-201ENST00000363215 102 ntBASIC0.23□□□□□ -2.37
EBF3Q9H4W6 MIR527-201ENST00000385244 85 ntBASIC0.23□□□□□ -2.37
EBF3Q9H4W6 RNU7-55P-201ENST00000459426 62 ntBASIC0.23□□□□□ -2.37
EBF3Q9H4W6 MIR4464-201ENST00000580818 92 ntBASIC0.23□□□□□ -2.37
EBF3Q9H4W6 AC104408.1-201ENST00000605241 170 ntBASIC0.23□□□□□ -2.37
EBF3Q9H4W6 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
EBF3Q9H4W6 uc_338.36-201ENST00000622331 158 ntBASIC0.23□□□□□ -2.37
EBF3Q9H4W6 RNU6-246P-201ENST00000384702 107 ntBASIC0.22□□□□□ -2.37
EBF3Q9H4W6 MIR593-201ENST00000384856 100 ntBASIC0.22□□□□□ -2.37
EBF3Q9H4W6 CR383656.4-201ENST00000546909 122 ntBASIC0.22□□□□□ -2.37
EBF3Q9H4W6 MIR4432-201ENST00000581823 84 ntBASIC0.21□□□□□ -2.38
EBF3Q9H4W6 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.21□□□□□ -2.38
EBF3Q9H4W6 RNU6-458P-201ENST00000384179 107 ntBASIC0.2□□□□□ -2.38
EBF3Q9H4W6 RNU6-455P-201ENST00000384681 107 ntBASIC0.2□□□□□ -2.38
EBF3Q9H4W6 MIR145-201ENST00000384967 88 ntBASIC0.2□□□□□ -2.38
EBF3Q9H4W6 U6.58-201ENST00000613107 107 ntBASIC0.2□□□□□ -2.38
EBF3Q9H4W6 MIR6888-201ENST00000621977 67 ntBASIC0.2□□□□□ -2.38
EBF3Q9H4W6 SNORD1B-201ENST00000363091 84 ntBASIC0.19□□□□□ -2.38
EBF3Q9H4W6 RNA5SP214-201ENST00000363378 118 ntBASIC0.19□□□□□ -2.38
EBF3Q9H4W6 SNORA42.1-201ENST00000363515 137 ntBASIC0.19□□□□□ -2.38
EBF3Q9H4W6 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
EBF3Q9H4W6 AC244250.2-201ENST00000418731 148 ntBASIC0.19□□□□□ -2.38
EBF3Q9H4W6 RNU6-231P-201ENST00000517122 103 ntBASIC0.19□□□□□ -2.38
EBF3Q9H4W6 MIR4743-201ENST00000584576 69 ntBASIC0.19□□□□□ -2.38
EBF3Q9H4W6 AL391099.1-201ENST00000624635 187 ntBASIC0.19□□□□□ -2.38
EBF3Q9H4W6 MIR148A-201ENST00000362215 68 ntBASIC0.18□□□□□ -2.38
EBF3Q9H4W6 SNORD114-9-201ENST00000364370 72 ntBASIC0.18□□□□□ -2.38
EBF3Q9H4W6 RNU6-900P-201ENST00000384498 102 ntBASIC0.18□□□□□ -2.38
EBF3Q9H4W6 RNU7-165P-201ENST00000458864 60 ntBASIC0.18□□□□□ -2.38
EBF3Q9H4W6 RNA5SP285-201ENST00000516619 119 ntBASIC0.18□□□□□ -2.38
EBF3Q9H4W6 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.18□□□□□ -2.38
EBF3Q9H4W6 MIR5704-201ENST00000584029 77 ntBASIC0.18□□□□□ -2.38
EBF3Q9H4W6 MIR8068-201ENST00000618032 68 ntBASIC0.18□□□□□ -2.38
EBF3Q9H4W6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.18□□□□□ -2.38
EBF3Q9H4W6 MIR655-201ENST00000362159 97 ntBASIC0.17□□□□□ -2.38
EBF3Q9H4W6 SNORD114-5-201ENST00000362928 70 ntBASIC0.17□□□□□ -2.38
EBF3Q9H4W6 RNU6-973P-201ENST00000364690 107 ntBASIC0.17□□□□□ -2.38
EBF3Q9H4W6 RNU6-614P-201ENST00000384369 107 ntBASIC0.17□□□□□ -2.38
EBF3Q9H4W6 RNU6-987P-201ENST00000384759 104 ntBASIC0.17□□□□□ -2.38
EBF3Q9H4W6 MIR892B-201ENST00000401279 77 ntBASIC0.17□□□□□ -2.38
EBF3Q9H4W6 AC096531.1-201ENST00000419107 107 ntBASIC0.17□□□□□ -2.38
EBF3Q9H4W6 U6.59-201ENST00000615686 107 ntBASIC0.17□□□□□ -2.38
EBF3Q9H4W6 RNU6-1312P-201ENST00000362425 108 ntBASIC0.16□□□□□ -2.38
EBF3Q9H4W6 RNU6-598P-201ENST00000364017 105 ntBASIC0.16□□□□□ -2.38
EBF3Q9H4W6 SNORD56B-201ENST00000384713 71 ntBASIC0.16□□□□□ -2.38
EBF3Q9H4W6 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
EBF3Q9H4W6 RNU4-37P-201ENST00000410214 84 ntBASIC0.16□□□□□ -2.38
EBF3Q9H4W6 AC108676.2-201ENST00000605225 163 ntBASIC0.16□□□□□ -2.38
EBF3Q9H4W6 AL445584.3-201ENST00000617173 78 ntBASIC0.16□□□□□ -2.38
EBF3Q9H4W6 MIR610-201ENST00000385139 96 ntBASIC0.15□□□□□ -2.39
EBF3Q9H4W6 SNORA40.16-201ENST00000517238 121 ntBASIC0.15□□□□□ -2.39
EBF3Q9H4W6 snoR1.1-201ENST00000628177 80 ntBASIC0.15□□□□□ -2.39
EBF3Q9H4W6 MIR7978-201ENST00000636158 59 ntBASIC0.15□□□□□ -2.39
EBF3Q9H4W6 SNORD116.2-201ENST00000391251 93 ntBASIC0.14□□□□□ -2.39
EBF3Q9H4W6 RNU6-1133P-201ENST00000410963 100 ntBASIC0.14□□□□□ -2.39
EBF3Q9H4W6 U2.18-201ENST00000622185 84 ntBASIC0.14□□□□□ -2.39
EBF3Q9H4W6 RNU6-520P-201ENST00000384717 104 ntBASIC0.13□□□□□ -2.39
EBF3Q9H4W6 RNU6-172P-201ENST00000411000 93 ntBASIC0.13□□□□□ -2.39
EBF3Q9H4W6 RNU6-929P-201ENST00000384429 107 ntBASIC0.12□□□□□ -2.39
EBF3Q9H4W6 RNU6-35P-201ENST00000384530 107 ntBASIC0.12□□□□□ -2.39
EBF3Q9H4W6 RNU7-159P-201ENST00000459284 62 ntBASIC0.12□□□□□ -2.39
EBF3Q9H4W6 AC114755.3-201ENST00000481111 251 ntBASIC0.12□□□□□ -2.39
EBF3Q9H4W6 MIR7110-201ENST00000612638 86 ntBASIC0.12□□□□□ -2.39
EBF3Q9H4W6 RNU6-810P-201ENST00000364001 107 ntBASIC0.11□□□□□ -2.39
EBF3Q9H4W6 MIR329-2-201ENST00000385029 84 ntBASIC0.11□□□□□ -2.39
EBF3Q9H4W6 RNU7-88P-201ENST00000458752 63 ntBASIC0.11□□□□□ -2.39
EBF3Q9H4W6 U7.5-201ENST00000517224 61 ntBASIC0.11□□□□□ -2.39
EBF3Q9H4W6 MIR5190-201ENST00000581537 80 ntBASIC0.11□□□□□ -2.39
EBF3Q9H4W6 RNU7-119P-201ENST00000459279 63 ntBASIC0.1□□□□□ -2.39
EBF3Q9H4W6 RNU6-1262P-201ENST00000516217 96 ntBASIC0.1□□□□□ -2.39
EBF3Q9H4W6 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
EBF3Q9H4W6 SNORA62.4-201ENST00000365504 151 ntBASIC0.09□□□□□ -2.4
EBF3Q9H4W6 MIR579-201ENST00000385221 98 ntBASIC0.09□□□□□ -2.4
EBF3Q9H4W6 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
EBF3Q9H4W6 MIR4280-201ENST00000582178 76 ntBASIC0.09□□□□□ -2.4
EBF3Q9H4W6 MIR4490-201ENST00000582647 84 ntBASIC0.09□□□□□ -2.4
EBF3Q9H4W6 MIR6854-201ENST00000614935 69 ntBASIC0.09□□□□□ -2.4
EBF3Q9H4W6 SNORA40B-201ENST00000385573 128 ntBASIC0.08□□□□□ -2.4
EBF3Q9H4W6 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.08□□□□□ -2.4
EBF3Q9H4W6 MIR429-201ENST00000362106 83 ntBASIC0.07□□□□□ -2.4
EBF3Q9H4W6 RNU7-151P-201ENST00000516930 53 ntBASIC0.07□□□□□ -2.4
EBF3Q9H4W6 RNU6-1174P-201ENST00000517278 101 ntBASIC0.07□□□□□ -2.4
EBF3Q9H4W6 MIR4290-201ENST00000583807 95 ntBASIC0.07□□□□□ -2.4
EBF3Q9H4W6 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.07□□□□□ -2.4
EBF3Q9H4W6 RNU6-936P-201ENST00000384005 107 ntBASIC0.06□□□□□ -2.4
EBF3Q9H4W6 RNU6-696P-201ENST00000390834 107 ntBASIC0.06□□□□□ -2.4
EBF3Q9H4W6 RNU6-141P-201ENST00000410499 105 ntBASIC0.06□□□□□ -2.4
EBF3Q9H4W6 AL445193.1-201ENST00000441183 141 ntBASIC0.06□□□□□ -2.4
EBF3Q9H4W6 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
EBF3Q9H4W6 SNORD49B-201ENST00000365172 72 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms