Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.38□□□□□ -2.47
NPAS1Q99742 MIR1245B-201ENST00000636115 69 ntBASIC-0.38□□□□□ -2.47
NPAS1Q99742 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.39□□□□□ -2.47
NPAS1Q99742 RNU6-645P-201ENST00000364649 106 ntBASIC-0.39□□□□□ -2.47
NPAS1Q99742 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.39□□□□□ -2.47
NPAS1Q99742 MIR519A2-201ENST00000384990 87 ntBASIC-0.39□□□□□ -2.47
NPAS1Q99742 RNU6-604P-201ENST00000390917 100 ntBASIC-0.39□□□□□ -2.47
NPAS1Q99742 RNU6-982P-201ENST00000516216 102 ntBASIC-0.39□□□□□ -2.47
NPAS1Q99742 RNA5SP476-201ENST00000516613 103 ntBASIC-0.39□□□□□ -2.47
NPAS1Q99742 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.39□□□□□ -2.47
NPAS1Q99742 MIR548AG1-201ENST00000579932 66 ntBASIC-0.39□□□□□ -2.47
NPAS1Q99742 MIR4324-201ENST00000584846 72 ntBASIC-0.39□□□□□ -2.47
NPAS1Q99742 MIR6888-201ENST00000621977 67 ntBASIC-0.39□□□□□ -2.47
NPAS1Q99742 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.39□□□□□ -2.47
NPAS1Q99742 SNORD115-22-201ENST00000364456 82 ntBASIC-0.4□□□□□ -2.47
NPAS1Q99742 U2.7-201ENST00000619197 100 ntBASIC-0.4□□□□□ -2.47
NPAS1Q99742 MIR1297-201ENST00000637311 77 ntBASIC-0.4□□□□□ -2.47
NPAS1Q99742 SNORD45.1-201ENST00000363181 77 ntBASIC-0.41□□□□□ -2.48
NPAS1Q99742 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.41□□□□□ -2.48
NPAS1Q99742 RNU6-721P-201ENST00000410155 105 ntBASIC-0.41□□□□□ -2.48
NPAS1Q99742 RNU6-284P-201ENST00000411105 106 ntBASIC-0.41□□□□□ -2.48
NPAS1Q99742 RNU6-807P-201ENST00000516805 107 ntBASIC-0.41□□□□□ -2.48
NPAS1Q99742 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.42□□□□□ -2.48
NPAS1Q99742 SNORD95.1-201ENST00000364099 68 ntBASIC-0.42□□□□□ -2.48
NPAS1Q99742 SNORD22.1-201ENST00000516331 125 ntBASIC-0.42□□□□□ -2.48
NPAS1Q99742 RNA5SP470-201ENST00000516463 106 ntBASIC-0.42□□□□□ -2.48
NPAS1Q99742 AL445584.3-201ENST00000617173 78 ntBASIC-0.42□□□□□ -2.48
NPAS1Q99742 AL627230.5-201ENST00000619807 58 ntBASIC-0.42□□□□□ -2.48
NPAS1Q99742 RNU6-10P-201ENST00000384036 107 ntBASIC-0.43□□□□□ -2.48
NPAS1Q99742 RNA5SP266-201ENST00000410273 108 ntBASIC-0.43□□□□□ -2.48
NPAS1Q99742 MIR6738-201ENST00000619620 64 ntBASIC-0.43□□□□□ -2.48
NPAS1Q99742 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.44□□□□□ -2.48
NPAS1Q99742 SNORA62.4-201ENST00000365504 151 ntBASIC-0.44□□□□□ -2.48
NPAS1Q99742 MIR518B-201ENST00000385127 83 ntBASIC-0.44□□□□□ -2.48
NPAS1Q99742 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
NPAS1Q99742 RNY4P29-201ENST00000410801 97 ntBASIC-0.44□□□□□ -2.48
NPAS1Q99742 RNU6-518P-201ENST00000516056 96 ntBASIC-0.44□□□□□ -2.48
NPAS1Q99742 RNU7-154P-201ENST00000516194 62 ntBASIC-0.44□□□□□ -2.48
NPAS1Q99742 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.44□□□□□ -2.48
NPAS1Q99742 SNORD114-14-201ENST00000362723 75 ntBASIC-0.45□□□□□ -2.48
NPAS1Q99742 RNU6-573P-201ENST00000383938 106 ntBASIC-0.45□□□□□ -2.48
NPAS1Q99742 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.45□□□□□ -2.48
NPAS1Q99742 SCARNA17-201ENST00000516183 144 ntBASIC-0.45□□□□□ -2.48
NPAS1Q99742 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 RNA5SP173-201ENST00000364857 136 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 SNORD45A-201ENST00000384512 84 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 MIR124-2-201ENST00000385081 109 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 MIR204-201ENST00000385200 110 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 MIR196A1-201ENST00000388006 70 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 AL021921.1-201ENST00000442774 93 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 RNU7-174P-201ENST00000516248 59 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 MIR3179-1-201ENST00000578940 84 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 MIR3179-2-201ENST00000579107 84 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 MIR3134-201ENST00000579433 74 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 MIR3179-3-201ENST00000579566 84 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 MIR3179-4-201ENST00000617599 84 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.46□□□□□ -2.48
NPAS1Q99742 SNORD113.1-201ENST00000363280 73 ntBASIC-0.47□□□□□ -2.48
NPAS1Q99742 SNORD74.6-201ENST00000364796 70 ntBASIC-0.47□□□□□ -2.48
NPAS1Q99742 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.47□□□□□ -2.48
NPAS1Q99742 SNORA3B-201ENST00000391305 131 ntBASIC-0.47□□□□□ -2.48
NPAS1Q99742 MIR4679-1-201ENST00000637619 75 ntBASIC-0.47□□□□□ -2.48
NPAS1Q99742 RNU6-228P-201ENST00000362700 106 ntBASIC-0.48□□□□□ -2.49
NPAS1Q99742 SNORA26.2-201ENST00000390922 122 ntBASIC-0.48□□□□□ -2.49
NPAS1Q99742 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.48□□□□□ -2.49
NPAS1Q99742 SNORA13-201ENST00000458790 133 ntBASIC-0.48□□□□□ -2.49
NPAS1Q99742 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.48□□□□□ -2.49
NPAS1Q99742 MIR4320-201ENST00000636981 65 ntBASIC-0.48□□□□□ -2.49
NPAS1Q99742 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.49□□□□□ -2.49
NPAS1Q99742 MIR587-201ENST00000384845 96 ntBASIC-0.49□□□□□ -2.49
NPAS1Q99742 SNX3P1X-201ENST00000414887 175 ntBASIC-0.49□□□□□ -2.49
NPAS1Q99742 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.49□□□□□ -2.49
NPAS1Q99742 MIR409-201ENST00000362237 79 ntBASIC-0.5□□□□□ -2.49
NPAS1Q99742 AP000533.3-201ENST00000447704 118 ntBASIC-0.5□□□□□ -2.49
NPAS1Q99742 AL500527.2-201ENST00000454105 95 ntBASIC-0.5□□□□□ -2.49
NPAS1Q99742 RNU6-70P-201ENST00000516438 60 ntBASIC-0.5□□□□□ -2.49
NPAS1Q99742 MIR3115-201ENST00000577915 68 ntBASIC-0.5□□□□□ -2.49
NPAS1Q99742 MIR548AX-201ENST00000580117 73 ntBASIC-0.5□□□□□ -2.49
NPAS1Q99742 SNORD115-31-201ENST00000365318 82 ntBASIC-0.51□□□□□ -2.49
NPAS1Q99742 SNORD116-24-201ENST00000384549 92 ntBASIC-0.51□□□□□ -2.49
NPAS1Q99742 RNU6-246P-201ENST00000384702 107 ntBASIC-0.51□□□□□ -2.49
NPAS1Q99742 MIR548C-201ENST00000384815 97 ntBASIC-0.51□□□□□ -2.49
NPAS1Q99742 MT-TQ-201ENST00000387372 72 ntBASIC-0.51□□□□□ -2.49
NPAS1Q99742 RNU6-687P-201ENST00000516443 89 ntBASIC-0.51□□□□□ -2.49
NPAS1Q99742 MIR8053-201ENST00000613344 75 ntBASIC-0.51□□□□□ -2.49
NPAS1Q99742 U4.4-201ENST00000620626 117 ntBASIC-0.51□□□□□ -2.49
NPAS1Q99742 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.52□□□□□ -2.49
NPAS1Q99742 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.52□□□□□ -2.49
NPAS1Q99742 MIR517B-201ENST00000385102 67 ntBASIC-0.52□□□□□ -2.49
NPAS1Q99742 MIR1468-201ENST00000410600 86 ntBASIC-0.52□□□□□ -2.49
NPAS1Q99742 AC021146.6-201ENST00000514659 117 ntBASIC-0.52□□□□□ -2.49
NPAS1Q99742 U4.2-201ENST00000618561 85 ntBASIC-0.52□□□□□ -2.49
NPAS1Q99742 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
NPAS1Q99742 RNU6-587P-201ENST00000391282 106 ntBASIC-0.53□□□□□ -2.49
NPAS1Q99742 MIR1255A-201ENST00000408338 113 ntBASIC-0.53□□□□□ -2.49
NPAS1Q99742 SNORD18.2-201ENST00000459604 70 ntBASIC-0.53□□□□□ -2.49
NPAS1Q99742 MIR3202-2-201ENST00000635980 79 ntBASIC-0.53□□□□□ -2.49
NPAS1Q99742 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.54□□□□□ -2.5
NPAS1Q99742 RNU6-523P-201ENST00000516304 54 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms