Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 RNU6-807P-201ENST00000516805 107 ntBASIC-2.13□□□□□ -2.75
CCDC43Q96MW1 MIR4770-201ENST00000579149 58 ntBASIC-2.13□□□□□ -2.75
CCDC43Q96MW1 MIR4490-201ENST00000582647 84 ntBASIC-2.13□□□□□ -2.75
CCDC43Q96MW1 RNU6-704P-201ENST00000364162 103 ntBASIC-2.14□□□□□ -2.75
CCDC43Q96MW1 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.14□□□□□ -2.75
CCDC43Q96MW1 RNU6-983P-201ENST00000516004 103 ntBASIC-2.15□□□□□ -2.75
CCDC43Q96MW1 AC091912.2-201ENST00000624798 167 ntBASIC-2.15□□□□□ -2.75
CCDC43Q96MW1 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.16□□□□□ -2.76
CCDC43Q96MW1 MIR548C-201ENST00000384815 97 ntBASIC-2.16□□□□□ -2.76
CCDC43Q96MW1 MIR889-201ENST00000401280 79 ntBASIC-2.16□□□□□ -2.76
CCDC43Q96MW1 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.16□□□□□ -2.76
CCDC43Q96MW1 SNORD115-37-201ENST00000363768 82 ntBASIC-2.17□□□□□ -2.76
CCDC43Q96MW1 RNU6-119P-201ENST00000364882 107 ntBASIC-2.17□□□□□ -2.76
CCDC43Q96MW1 RNU6-645P-201ENST00000364649 106 ntBASIC-2.18□□□□□ -2.76
CCDC43Q96MW1 RNU6-959P-201ENST00000384671 107 ntBASIC-2.18□□□□□ -2.76
CCDC43Q96MW1 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.18□□□□□ -2.76
CCDC43Q96MW1 MTATP8P2-201ENST00000435212 202 ntBASIC-2.19□□□□□ -2.76
CCDC43Q96MW1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.19□□□□□ -2.76
CCDC43Q96MW1 RNU6-633P-201ENST00000362612 103 ntBASIC-2.2□□□□□ -2.76
CCDC43Q96MW1 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.2□□□□□ -2.76
CCDC43Q96MW1 snosnR66.1-201ENST00000391095 99 ntBASIC-2.2□□□□□ -2.76
CCDC43Q96MW1 AC008267.6-201ENST00000441664 139 ntBASIC-2.2□□□□□ -2.76
CCDC43Q96MW1 RNU6-766P-201ENST00000362478 107 ntBASIC-2.21□□□□□ -2.76
CCDC43Q96MW1 MIR4668-201ENST00000582284 70 ntBASIC-2.21□□□□□ -2.76
CCDC43Q96MW1 AL365222.1-201ENST00000614661 98 ntBASIC-2.21□□□□□ -2.76
CCDC43Q96MW1 MIR6874-201ENST00000635894 71 ntBASIC-2.21□□□□□ -2.76
CCDC43Q96MW1 AL078595.1-201ENST00000404458 226 ntBASIC-2.22□□□□□ -2.76
CCDC43Q96MW1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.22□□□□□ -2.76
CCDC43Q96MW1 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.23□□□□□ -2.77
CCDC43Q96MW1 RNU6-209P-201ENST00000384118 107 ntBASIC-2.23□□□□□ -2.77
CCDC43Q96MW1 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.23□□□□□ -2.77
CCDC43Q96MW1 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.23□□□□□ -2.77
CCDC43Q96MW1 MIR6502-201ENST00000617296 76 ntBASIC-2.23□□□□□ -2.77
CCDC43Q96MW1 RNU6-478P-201ENST00000363904 110 ntBASIC-2.24□□□□□ -2.77
CCDC43Q96MW1 AC090616.4-201ENST00000448026 115 ntBASIC-2.24□□□□□ -2.77
CCDC43Q96MW1 AC093729.1-201ENST00000513074 128 ntBASIC-2.24□□□□□ -2.77
CCDC43Q96MW1 RNU6-624P-201ENST00000363411 107 ntBASIC-2.25□□□□□ -2.77
CCDC43Q96MW1 RPL35AP4-201ENST00000412007 102 ntBASIC-2.25□□□□□ -2.77
CCDC43Q96MW1 MIR4520-1-201ENST00000582609 70 ntBASIC-2.25□□□□□ -2.77
CCDC43Q96MW1 MIR548Q-201ENST00000408404 100 ntBASIC-2.26□□□□□ -2.77
CCDC43Q96MW1 RNU6-330P-201ENST00000363015 107 ntBASIC-2.27□□□□□ -2.77
CCDC43Q96MW1 RNU6-589P-201ENST00000516485 107 ntBASIC-2.27□□□□□ -2.77
CCDC43Q96MW1 RNU6-458P-201ENST00000384179 107 ntBASIC-2.28□□□□□ -2.77
CCDC43Q96MW1 MIR496-201ENST00000385226 102 ntBASIC-2.28□□□□□ -2.77
CCDC43Q96MW1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.28□□□□□ -2.77
CCDC43Q96MW1 RNU7-174P-201ENST00000516248 59 ntBASIC-2.28□□□□□ -2.77
CCDC43Q96MW1 MIR3675-201ENST00000583661 73 ntBASIC-2.28□□□□□ -2.77
CCDC43Q96MW1 U6.58-201ENST00000613107 107 ntBASIC-2.28□□□□□ -2.77
CCDC43Q96MW1 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.29□□□□□ -2.78
CCDC43Q96MW1 RNU6-168P-201ENST00000516189 101 ntBASIC-2.29□□□□□ -2.78
CCDC43Q96MW1 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.3□□□□□ -2.78
CCDC43Q96MW1 MIR2052-201ENST00000636055 55 ntBASIC-2.3□□□□□ -2.78
CCDC43Q96MW1 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.31□□□□□ -2.78
CCDC43Q96MW1 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.32□□□□□ -2.78
CCDC43Q96MW1 RNU6-696P-201ENST00000390834 107 ntBASIC-2.32□□□□□ -2.78
CCDC43Q96MW1 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.34□□□□□ -2.78
CCDC43Q96MW1 SNORD116-22-201ENST00000384430 92 ntBASIC-2.34□□□□□ -2.78
CCDC43Q96MW1 RNU6-303P-201ENST00000517091 106 ntBASIC-2.34□□□□□ -2.78
CCDC43Q96MW1 MIR450A1-201ENST00000362262 91 ntBASIC-2.35□□□□□ -2.79
CCDC43Q96MW1 SNORD18.1-201ENST00000363807 70 ntBASIC-2.35□□□□□ -2.79
CCDC43Q96MW1 RNU6-982P-201ENST00000516216 102 ntBASIC-2.35□□□□□ -2.79
CCDC43Q96MW1 RNU6-81P-201ENST00000365608 104 ntBASIC-2.36□□□□□ -2.79
CCDC43Q96MW1 SNORA8.1-201ENST00000384250 140 ntBASIC-2.36□□□□□ -2.79
CCDC43Q96MW1 RNU6-604P-201ENST00000390917 100 ntBASIC-2.36□□□□□ -2.79
CCDC43Q96MW1 AC018880.2-201ENST00000414265 201 ntBASIC-2.36□□□□□ -2.79
CCDC43Q96MW1 AL031737.1-201ENST00000450125 223 ntBASIC-2.36□□□□□ -2.79
CCDC43Q96MW1 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.36□□□□□ -2.79
CCDC43Q96MW1 RNU6-267P-201ENST00000516714 103 ntBASIC-2.36□□□□□ -2.79
CCDC43Q96MW1 SNORD45.1-201ENST00000363181 77 ntBASIC-2.37□□□□□ -2.79
CCDC43Q96MW1 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.37□□□□□ -2.79
CCDC43Q96MW1 RNU6-587P-201ENST00000391282 106 ntBASIC-2.37□□□□□ -2.79
CCDC43Q96MW1 RNU6-402P-201ENST00000410678 103 ntBASIC-2.37□□□□□ -2.79
CCDC43Q96MW1 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.37□□□□□ -2.79
CCDC43Q96MW1 RNU6-557P-201ENST00000516842 110 ntBASIC-2.37□□□□□ -2.79
CCDC43Q96MW1 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.38□□□□□ -2.79
CCDC43Q96MW1 RNU6-400P-201ENST00000391173 106 ntBASIC-2.38□□□□□ -2.79
CCDC43Q96MW1 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.38□□□□□ -2.79
CCDC43Q96MW1 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.38□□□□□ -2.79
CCDC43Q96MW1 MIR429-201ENST00000362106 83 ntBASIC-2.39□□□□□ -2.79
CCDC43Q96MW1 RNU6-219P-201ENST00000364728 107 ntBASIC-2.39□□□□□ -2.79
CCDC43Q96MW1 MIR548BB-201ENST00000626714 66 ntBASIC-2.39□□□□□ -2.79
CCDC43Q96MW1 RNU6-834P-201ENST00000362367 110 ntBASIC-2.4□□□□□ -2.79
CCDC43Q96MW1 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.4□□□□□ -2.79
CCDC43Q96MW1 RNU6-686P-201ENST00000364839 107 ntBASIC-2.4□□□□□ -2.79
CCDC43Q96MW1 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.4□□□□□ -2.79
CCDC43Q96MW1 RNU6-630P-201ENST00000391258 106 ntBASIC-2.41□□□□□ -2.8
CCDC43Q96MW1 RNU6-118P-201ENST00000516552 102 ntBASIC-2.41□□□□□ -2.8
CCDC43Q96MW1 RNU6-79P-201ENST00000362511 107 ntBASIC-2.42□□□□□ -2.8
CCDC43Q96MW1 RNU6-608P-201ENST00000383927 104 ntBASIC-2.42□□□□□ -2.8
CCDC43Q96MW1 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.42□□□□□ -2.8
CCDC43Q96MW1 AC074348.1-201ENST00000426503 132 ntBASIC-2.42□□□□□ -2.8
CCDC43Q96MW1 AP001318.4-201ENST00000616637 121 ntBASIC-2.42□□□□□ -2.8
CCDC43Q96MW1 MALAT1.1-201ENST00000618249 95 ntBASIC-2.42□□□□□ -2.8
CCDC43Q96MW1 RNU6-698P-201ENST00000363523 107 ntBASIC-2.43□□□□□ -2.8
CCDC43Q96MW1 RNU6-34P-201ENST00000364874 107 ntBASIC-2.43□□□□□ -2.8
CCDC43Q96MW1 U4.4-201ENST00000620626 117 ntBASIC-2.43□□□□□ -2.8
CCDC43Q96MW1 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.44□□□□□ -2.8
CCDC43Q96MW1 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.44□□□□□ -2.8
CCDC43Q96MW1 SNORA40.13-201ENST00000516379 120 ntBASIC-2.44□□□□□ -2.8
CCDC43Q96MW1 RNU6-598P-201ENST00000364017 105 ntBASIC-2.45□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 221.2 ms