Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC010487.4-201ENST00000637027 61 ntBASIC0.58□□□□□ -2.32
CHFRQ96EP1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
CHFRQ96EP1 MIR429-201ENST00000362106 83 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 Y_RNA.69-201ENST00000362885 109 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 MIR106A-201ENST00000384870 81 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 MIR545-201ENST00000385085 106 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 RNU6-1262P-201ENST00000516217 96 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 AP000676.1-201ENST00000533307 52 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 MIR4464-201ENST00000580818 92 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 SNORD44.1-201ENST00000363202 61 ntBASIC0.56□□□□□ -2.32
CHFRQ96EP1 RNA5SP330-201ENST00000517096 96 ntBASIC0.56□□□□□ -2.32
CHFRQ96EP1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
CHFRQ96EP1 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.55□□□□□ -2.32
CHFRQ96EP1 RNU6-1206P-201ENST00000516339 103 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 RNU7-160P-201ENST00000516660 62 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 SCARNA11.2-201ENST00000517183 154 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 MIR4432-201ENST00000581823 84 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 AC108676.2-201ENST00000605225 163 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 MIR6888-201ENST00000621977 67 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 Y_RNA.115-201ENST00000363272 98 ntBASIC0.54□□□□□ -2.32
CHFRQ96EP1 MIR125B1-201ENST00000385236 88 ntBASIC0.54□□□□□ -2.32
CHFRQ96EP1 RNU7-129P-201ENST00000516128 62 ntBASIC0.54□□□□□ -2.32
CHFRQ96EP1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.53□□□□□ -2.32
CHFRQ96EP1 RNA5SP457-201ENST00000363657 124 ntBASIC0.53□□□□□ -2.32
CHFRQ96EP1 RNU6-863P-201ENST00000515989 104 ntBASIC0.53□□□□□ -2.32
CHFRQ96EP1 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
CHFRQ96EP1 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
CHFRQ96EP1 MIR924-201ENST00000638017 53 ntBASIC0.53□□□□□ -2.32
CHFRQ96EP1 RNU6-945P-201ENST00000383947 107 ntBASIC0.52□□□□□ -2.33
CHFRQ96EP1 RNU6-696P-201ENST00000390834 107 ntBASIC0.52□□□□□ -2.33
CHFRQ96EP1 RNU6-1267P-201ENST00000410747 107 ntBASIC0.52□□□□□ -2.33
CHFRQ96EP1 U7.5-201ENST00000517224 61 ntBASIC0.52□□□□□ -2.33
CHFRQ96EP1 MIR103A1-201ENST00000362165 78 ntBASIC0.51□□□□□ -2.33
CHFRQ96EP1 RNU7-88P-201ENST00000458752 63 ntBASIC0.51□□□□□ -2.33
CHFRQ96EP1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CHFRQ96EP1 AL445584.3-201ENST00000617173 78 ntBASIC0.51□□□□□ -2.33
CHFRQ96EP1 RNU6-247P-201ENST00000362636 107 ntBASIC0.5□□□□□ -2.33
CHFRQ96EP1 RNU6-974P-201ENST00000384099 108 ntBASIC0.5□□□□□ -2.33
CHFRQ96EP1 MIR548AA1-201ENST00000384971 97 ntBASIC0.5□□□□□ -2.33
CHFRQ96EP1 SNORD57-201ENST00000448188 72 ntBASIC0.5□□□□□ -2.33
CHFRQ96EP1 uc_338.36-201ENST00000622331 158 ntBASIC0.5□□□□□ -2.33
CHFRQ96EP1 MIR330-201ENST00000362196 94 ntBASIC0.49□□□□□ -2.33
CHFRQ96EP1 RNU6-986P-201ENST00000363133 102 ntBASIC0.49□□□□□ -2.33
CHFRQ96EP1 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
CHFRQ96EP1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
CHFRQ96EP1 RNU7-55P-201ENST00000459426 62 ntBASIC0.49□□□□□ -2.33
CHFRQ96EP1 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
CHFRQ96EP1 RNU6-1174P-201ENST00000517278 101 ntBASIC0.49□□□□□ -2.33
CHFRQ96EP1 RNA5SP98-201ENST00000363158 137 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 MIR329-2-201ENST00000385029 84 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 RNU6-127P-201ENST00000390897 107 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 MIR1197-201ENST00000408818 88 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 MIR2909-201ENST00000617113 69 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 MTRNR2L9-201ENST00000622562 75 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 AL391099.1-201ENST00000624635 187 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 Y_RNA.139-201ENST00000363464 102 ntBASIC0.47□□□□□ -2.33
CHFRQ96EP1 RNU6-828P-201ENST00000364876 107 ntBASIC0.47□□□□□ -2.33
CHFRQ96EP1 AL451105.1-201ENST00000450005 189 ntBASIC0.47□□□□□ -2.33
CHFRQ96EP1 MIR8087-201ENST00000612745 78 ntBASIC0.47□□□□□ -2.33
CHFRQ96EP1 snoR1.1-201ENST00000628177 80 ntBASIC0.47□□□□□ -2.33
CHFRQ96EP1 RNU6-815P-201ENST00000384080 113 ntBASIC0.46□□□□□ -2.34
CHFRQ96EP1 RNU6-995P-201ENST00000391244 107 ntBASIC0.46□□□□□ -2.34
CHFRQ96EP1 MIR548H2-201ENST00000408874 88 ntBASIC0.46□□□□□ -2.34
CHFRQ96EP1 AC108740.1-201ENST00000498629 225 ntBASIC0.46□□□□□ -2.34
CHFRQ96EP1 MIR548AL-201ENST00000578416 97 ntBASIC0.46□□□□□ -2.34
CHFRQ96EP1 RNU6-973P-201ENST00000364690 107 ntBASIC0.45□□□□□ -2.34
CHFRQ96EP1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
CHFRQ96EP1 MIR8068-201ENST00000618032 68 ntBASIC0.45□□□□□ -2.34
CHFRQ96EP1 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
CHFRQ96EP1 AC096531.1-201ENST00000419107 107 ntBASIC0.44□□□□□ -2.34
CHFRQ96EP1 MIR5704-201ENST00000584029 77 ntBASIC0.44□□□□□ -2.34
CHFRQ96EP1 SNORA62.4-201ENST00000365504 151 ntBASIC0.43□□□□□ -2.34
CHFRQ96EP1 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
CHFRQ96EP1 RNU6-900P-201ENST00000384498 102 ntBASIC0.43□□□□□ -2.34
CHFRQ96EP1 MIR643-201ENST00000385267 97 ntBASIC0.43□□□□□ -2.34
CHFRQ96EP1 SNORD63.1-201ENST00000516178 80 ntBASIC0.43□□□□□ -2.34
CHFRQ96EP1 MIR6507-201ENST00000613630 70 ntBASIC0.43□□□□□ -2.34
CHFRQ96EP1 RNU6-1250P-201ENST00000391218 107 ntBASIC0.42□□□□□ -2.34
CHFRQ96EP1 RNU6-1133P-201ENST00000410963 100 ntBASIC0.42□□□□□ -2.34
CHFRQ96EP1 MIR3170-201ENST00000582699 77 ntBASIC0.42□□□□□ -2.34
CHFRQ96EP1 MIR6514-201ENST00000622549 70 ntBASIC0.42□□□□□ -2.34
CHFRQ96EP1 RNU6-455P-201ENST00000384681 107 ntBASIC0.41□□□□□ -2.34
CHFRQ96EP1 MIR29B1-201ENST00000385015 81 ntBASIC0.41□□□□□ -2.34
CHFRQ96EP1 Y_RNA.613-201ENST00000410726 97 ntBASIC0.41□□□□□ -2.34
CHFRQ96EP1 SNORD63.2-201ENST00000516303 64 ntBASIC0.4□□□□□ -2.35
CHFRQ96EP1 RNU6-180P-201ENST00000516697 61 ntBASIC0.4□□□□□ -2.35
CHFRQ96EP1 MIR4514-201ENST00000581410 57 ntBASIC0.4□□□□□ -2.35
CHFRQ96EP1 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
CHFRQ96EP1 AC069113.3-201ENST00000521019 150 ntBASIC0.39□□□□□ -2.35
CHFRQ96EP1 CR383656.4-201ENST00000546909 122 ntBASIC0.39□□□□□ -2.35
CHFRQ96EP1 RNA5SP62-201ENST00000363457 110 ntBASIC0.38□□□□□ -2.35
CHFRQ96EP1 SNORA42.1-201ENST00000363515 137 ntBASIC0.38□□□□□ -2.35
CHFRQ96EP1 SNORD56B-201ENST00000384713 71 ntBASIC0.38□□□□□ -2.35
CHFRQ96EP1 RNU6-258P-201ENST00000390884 101 ntBASIC0.38□□□□□ -2.35
CHFRQ96EP1 RNA5SP163-201ENST00000410304 99 ntBASIC0.38□□□□□ -2.35
CHFRQ96EP1 RNU6-732P-201ENST00000516033 103 ntBASIC0.38□□□□□ -2.35
CHFRQ96EP1 Y_RNA.68-201ENST00000362881 102 ntBASIC0.37□□□□□ -2.35
CHFRQ96EP1 RNU6-742P-201ENST00000365289 107 ntBASIC0.37□□□□□ -2.35
CHFRQ96EP1 MIR520D-201ENST00000385002 87 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 1370.3 ms