Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC010487.4-201ENST00000637027 61 ntBASIC0.58□□□□□ -2.32
CHFRQ96EP1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
CHFRQ96EP1 MIR429-201ENST00000362106 83 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 Y_RNA.69-201ENST00000362885 109 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 MIR106A-201ENST00000384870 81 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 MIR545-201ENST00000385085 106 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 RNU6-1262P-201ENST00000516217 96 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 AP000676.1-201ENST00000533307 52 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 MIR4464-201ENST00000580818 92 ntBASIC0.57□□□□□ -2.32
CHFRQ96EP1 SNORD44.1-201ENST00000363202 61 ntBASIC0.56□□□□□ -2.32
CHFRQ96EP1 RNA5SP330-201ENST00000517096 96 ntBASIC0.56□□□□□ -2.32
CHFRQ96EP1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
CHFRQ96EP1 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.55□□□□□ -2.32
CHFRQ96EP1 RNU6-1206P-201ENST00000516339 103 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 RNU7-160P-201ENST00000516660 62 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 SCARNA11.2-201ENST00000517183 154 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 MIR4432-201ENST00000581823 84 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 AC108676.2-201ENST00000605225 163 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 MIR6888-201ENST00000621977 67 ntBASIC0.55□□□□□ -2.32
CHFRQ96EP1 Y_RNA.115-201ENST00000363272 98 ntBASIC0.54□□□□□ -2.32
CHFRQ96EP1 MIR125B1-201ENST00000385236 88 ntBASIC0.54□□□□□ -2.32
CHFRQ96EP1 RNU7-129P-201ENST00000516128 62 ntBASIC0.54□□□□□ -2.32
CHFRQ96EP1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.53□□□□□ -2.32
CHFRQ96EP1 RNA5SP457-201ENST00000363657 124 ntBASIC0.53□□□□□ -2.32
CHFRQ96EP1 RNU6-863P-201ENST00000515989 104 ntBASIC0.53□□□□□ -2.32
CHFRQ96EP1 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
CHFRQ96EP1 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
CHFRQ96EP1 MIR924-201ENST00000638017 53 ntBASIC0.53□□□□□ -2.32
CHFRQ96EP1 RNU6-945P-201ENST00000383947 107 ntBASIC0.52□□□□□ -2.33
CHFRQ96EP1 RNU6-696P-201ENST00000390834 107 ntBASIC0.52□□□□□ -2.33
CHFRQ96EP1 RNU6-1267P-201ENST00000410747 107 ntBASIC0.52□□□□□ -2.33
CHFRQ96EP1 U7.5-201ENST00000517224 61 ntBASIC0.52□□□□□ -2.33
CHFRQ96EP1 MIR103A1-201ENST00000362165 78 ntBASIC0.51□□□□□ -2.33
CHFRQ96EP1 RNU7-88P-201ENST00000458752 63 ntBASIC0.51□□□□□ -2.33
CHFRQ96EP1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CHFRQ96EP1 AL445584.3-201ENST00000617173 78 ntBASIC0.51□□□□□ -2.33
CHFRQ96EP1 RNU6-247P-201ENST00000362636 107 ntBASIC0.5□□□□□ -2.33
CHFRQ96EP1 RNU6-974P-201ENST00000384099 108 ntBASIC0.5□□□□□ -2.33
CHFRQ96EP1 MIR548AA1-201ENST00000384971 97 ntBASIC0.5□□□□□ -2.33
CHFRQ96EP1 SNORD57-201ENST00000448188 72 ntBASIC0.5□□□□□ -2.33
CHFRQ96EP1 uc_338.36-201ENST00000622331 158 ntBASIC0.5□□□□□ -2.33
CHFRQ96EP1 MIR330-201ENST00000362196 94 ntBASIC0.49□□□□□ -2.33
CHFRQ96EP1 RNU6-986P-201ENST00000363133 102 ntBASIC0.49□□□□□ -2.33
CHFRQ96EP1 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
CHFRQ96EP1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
CHFRQ96EP1 RNU7-55P-201ENST00000459426 62 ntBASIC0.49□□□□□ -2.33
CHFRQ96EP1 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
CHFRQ96EP1 RNU6-1174P-201ENST00000517278 101 ntBASIC0.49□□□□□ -2.33
CHFRQ96EP1 RNA5SP98-201ENST00000363158 137 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 MIR329-2-201ENST00000385029 84 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 RNU6-127P-201ENST00000390897 107 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 MIR1197-201ENST00000408818 88 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 MIR2909-201ENST00000617113 69 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 MTRNR2L9-201ENST00000622562 75 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 AL391099.1-201ENST00000624635 187 ntBASIC0.48□□□□□ -2.33
CHFRQ96EP1 Y_RNA.139-201ENST00000363464 102 ntBASIC0.47□□□□□ -2.33
CHFRQ96EP1 RNU6-828P-201ENST00000364876 107 ntBASIC0.47□□□□□ -2.33
CHFRQ96EP1 AL451105.1-201ENST00000450005 189 ntBASIC0.47□□□□□ -2.33
CHFRQ96EP1 MIR8087-201ENST00000612745 78 ntBASIC0.47□□□□□ -2.33
CHFRQ96EP1 snoR1.1-201ENST00000628177 80 ntBASIC0.47□□□□□ -2.33
CHFRQ96EP1 RNU6-815P-201ENST00000384080 113 ntBASIC0.46□□□□□ -2.34
CHFRQ96EP1 RNU6-995P-201ENST00000391244 107 ntBASIC0.46□□□□□ -2.34
CHFRQ96EP1 MIR548H2-201ENST00000408874 88 ntBASIC0.46□□□□□ -2.34
CHFRQ96EP1 AC108740.1-201ENST00000498629 225 ntBASIC0.46□□□□□ -2.34
CHFRQ96EP1 MIR548AL-201ENST00000578416 97 ntBASIC0.46□□□□□ -2.34
CHFRQ96EP1 RNU6-973P-201ENST00000364690 107 ntBASIC0.45□□□□□ -2.34
CHFRQ96EP1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
CHFRQ96EP1 MIR8068-201ENST00000618032 68 ntBASIC0.45□□□□□ -2.34
CHFRQ96EP1 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
CHFRQ96EP1 AC096531.1-201ENST00000419107 107 ntBASIC0.44□□□□□ -2.34
CHFRQ96EP1 MIR5704-201ENST00000584029 77 ntBASIC0.44□□□□□ -2.34
CHFRQ96EP1 SNORA62.4-201ENST00000365504 151 ntBASIC0.43□□□□□ -2.34
CHFRQ96EP1 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
CHFRQ96EP1 RNU6-900P-201ENST00000384498 102 ntBASIC0.43□□□□□ -2.34
CHFRQ96EP1 MIR643-201ENST00000385267 97 ntBASIC0.43□□□□□ -2.34
CHFRQ96EP1 SNORD63.1-201ENST00000516178 80 ntBASIC0.43□□□□□ -2.34
CHFRQ96EP1 MIR6507-201ENST00000613630 70 ntBASIC0.43□□□□□ -2.34
CHFRQ96EP1 RNU6-1250P-201ENST00000391218 107 ntBASIC0.42□□□□□ -2.34
CHFRQ96EP1 RNU6-1133P-201ENST00000410963 100 ntBASIC0.42□□□□□ -2.34
CHFRQ96EP1 MIR3170-201ENST00000582699 77 ntBASIC0.42□□□□□ -2.34
CHFRQ96EP1 MIR6514-201ENST00000622549 70 ntBASIC0.42□□□□□ -2.34
CHFRQ96EP1 RNU6-455P-201ENST00000384681 107 ntBASIC0.41□□□□□ -2.34
CHFRQ96EP1 MIR29B1-201ENST00000385015 81 ntBASIC0.41□□□□□ -2.34
CHFRQ96EP1 Y_RNA.613-201ENST00000410726 97 ntBASIC0.41□□□□□ -2.34
CHFRQ96EP1 SNORD63.2-201ENST00000516303 64 ntBASIC0.4□□□□□ -2.35
CHFRQ96EP1 RNU6-180P-201ENST00000516697 61 ntBASIC0.4□□□□□ -2.35
CHFRQ96EP1 MIR4514-201ENST00000581410 57 ntBASIC0.4□□□□□ -2.35
CHFRQ96EP1 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
CHFRQ96EP1 AC069113.3-201ENST00000521019 150 ntBASIC0.39□□□□□ -2.35
CHFRQ96EP1 CR383656.4-201ENST00000546909 122 ntBASIC0.39□□□□□ -2.35
CHFRQ96EP1 RNA5SP62-201ENST00000363457 110 ntBASIC0.38□□□□□ -2.35
CHFRQ96EP1 SNORA42.1-201ENST00000363515 137 ntBASIC0.38□□□□□ -2.35
CHFRQ96EP1 SNORD56B-201ENST00000384713 71 ntBASIC0.38□□□□□ -2.35
CHFRQ96EP1 RNU6-258P-201ENST00000390884 101 ntBASIC0.38□□□□□ -2.35
CHFRQ96EP1 RNA5SP163-201ENST00000410304 99 ntBASIC0.38□□□□□ -2.35
CHFRQ96EP1 RNU6-732P-201ENST00000516033 103 ntBASIC0.38□□□□□ -2.35
CHFRQ96EP1 Y_RNA.68-201ENST00000362881 102 ntBASIC0.37□□□□□ -2.35
CHFRQ96EP1 RNU6-742P-201ENST00000365289 107 ntBASIC0.37□□□□□ -2.35
CHFRQ96EP1 MIR520D-201ENST00000385002 87 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms