Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MIR8068-201ENST00000618032 68 ntBASIC-0.82□□□□□ -2.54
CHMP4CQ96CF2 SNORA3B-201ENST00000391305 131 ntBASIC-0.83□□□□□ -2.54
CHMP4CQ96CF2 AL021921.1-201ENST00000442774 93 ntBASIC-0.84□□□□□ -2.54
CHMP4CQ96CF2 RNU6-518P-201ENST00000516056 96 ntBASIC-0.84□□□□□ -2.54
CHMP4CQ96CF2 AC062037.1-201ENST00000605302 128 ntBASIC-0.84□□□□□ -2.54
CHMP4CQ96CF2 RNU7-154P-201ENST00000516194 62 ntBASIC-0.85□□□□□ -2.55
CHMP4CQ96CF2 MIR4666B-201ENST00000578142 81 ntBASIC-0.85□□□□□ -2.55
CHMP4CQ96CF2 MIR409-201ENST00000362237 79 ntBASIC-0.86□□□□□ -2.55
CHMP4CQ96CF2 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.86□□□□□ -2.55
CHMP4CQ96CF2 SNORD74.6-201ENST00000364796 70 ntBASIC-0.86□□□□□ -2.55
CHMP4CQ96CF2 MIR548C-201ENST00000384815 97 ntBASIC-0.86□□□□□ -2.55
CHMP4CQ96CF2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.86□□□□□ -2.55
CHMP4CQ96CF2 SNORD114-14-201ENST00000362723 75 ntBASIC-0.87□□□□□ -2.55
CHMP4CQ96CF2 SNORD22.1-201ENST00000516331 125 ntBASIC-0.87□□□□□ -2.55
CHMP4CQ96CF2 MIR3179-1-201ENST00000578940 84 ntBASIC-0.87□□□□□ -2.55
CHMP4CQ96CF2 MIR3179-2-201ENST00000579107 84 ntBASIC-0.87□□□□□ -2.55
CHMP4CQ96CF2 MIR3179-3-201ENST00000579566 84 ntBASIC-0.87□□□□□ -2.55
CHMP4CQ96CF2 MIR3179-4-201ENST00000617599 84 ntBASIC-0.87□□□□□ -2.55
CHMP4CQ96CF2 MIR8053-201ENST00000613344 75 ntBASIC-0.88□□□□□ -2.55
CHMP4CQ96CF2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.89□□□□□ -2.55
CHMP4CQ96CF2 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.9□□□□□ -2.55
CHMP4CQ96CF2 SNORD73B-201ENST00000364394 72 ntBASIC-0.9□□□□□ -2.55
CHMP4CQ96CF2 MIR3681-201ENST00000580089 72 ntBASIC-0.9□□□□□ -2.55
CHMP4CQ96CF2 MIR519A2-201ENST00000384990 87 ntBASIC-0.91□□□□□ -2.56
CHMP4CQ96CF2 RNA5SP331-201ENST00000364986 107 ntBASIC-0.92□□□□□ -2.56
CHMP4CQ96CF2 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.92□□□□□ -2.56
CHMP4CQ96CF2 MIR124-2-201ENST00000385081 109 ntBASIC-0.92□□□□□ -2.56
CHMP4CQ96CF2 MTND4LP1-201ENST00000446263 157 ntBASIC-0.92□□□□□ -2.56
CHMP4CQ96CF2 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.92□□□□□ -2.56
CHMP4CQ96CF2 U2.7-201ENST00000619197 100 ntBASIC-0.92□□□□□ -2.56
CHMP4CQ96CF2 SNORD57-201ENST00000448188 72 ntBASIC-0.93□□□□□ -2.56
CHMP4CQ96CF2 SNORD18.2-201ENST00000459604 70 ntBASIC-0.93□□□□□ -2.56
CHMP4CQ96CF2 RNU6-982P-201ENST00000516216 102 ntBASIC-0.93□□□□□ -2.56
CHMP4CQ96CF2 SCARNA18B-201ENST00000458806 135 ntBASIC-0.94□□□□□ -2.56
CHMP4CQ96CF2 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.95□□□□□ -2.56
CHMP4CQ96CF2 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.95□□□□□ -2.56
CHMP4CQ96CF2 SNORA26.2-201ENST00000390922 122 ntBASIC-0.95□□□□□ -2.56
CHMP4CQ96CF2 RNY1P9-201ENST00000532431 109 ntBASIC-0.95□□□□□ -2.56
CHMP4CQ96CF2 AL445584.3-201ENST00000617173 78 ntBASIC-0.95□□□□□ -2.56
CHMP4CQ96CF2 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.96□□□□□ -2.56
CHMP4CQ96CF2 AP000533.3-201ENST00000447704 118 ntBASIC-0.96□□□□□ -2.56
CHMP4CQ96CF2 RNU6-881P-201ENST00000516813 102 ntBASIC-0.96□□□□□ -2.56
CHMP4CQ96CF2 MIR4464-201ENST00000580818 92 ntBASIC-0.96□□□□□ -2.56
CHMP4CQ96CF2 MIR664A-201ENST00000626086 82 ntBASIC-0.96□□□□□ -2.56
CHMP4CQ96CF2 SNORD115-22-201ENST00000364456 82 ntBASIC-0.97□□□□□ -2.56
CHMP4CQ96CF2 MIR196A1-201ENST00000388006 70 ntBASIC-0.97□□□□□ -2.56
CHMP4CQ96CF2 RNU6-70P-201ENST00000516438 60 ntBASIC-0.97□□□□□ -2.56
CHMP4CQ96CF2 MIR6888-201ENST00000621977 67 ntBASIC-0.97□□□□□ -2.56
CHMP4CQ96CF2 RNA5SP266-201ENST00000410273 108 ntBASIC-0.98□□□□□ -2.57
CHMP4CQ96CF2 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.98□□□□□ -2.57
CHMP4CQ96CF2 MIR3202-2-201ENST00000635980 79 ntBASIC-0.98□□□□□ -2.57
CHMP4CQ96CF2 RNU6-787P-201ENST00000384032 107 ntBASIC-0.99□□□□□ -2.57
CHMP4CQ96CF2 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.99□□□□□ -2.57
CHMP4CQ96CF2 RNU6-721P-201ENST00000410155 105 ntBASIC-0.99□□□□□ -2.57
CHMP4CQ96CF2 RNY4P29-201ENST00000410801 97 ntBASIC-0.99□□□□□ -2.57
CHMP4CQ96CF2 RNU6-924P-201ENST00000362926 108 ntBASIC-1□□□□□ -2.57
CHMP4CQ96CF2 SNORD113.1-201ENST00000363280 73 ntBASIC-1.01□□□□□ -2.57
CHMP4CQ96CF2 RNU6-668P-201ENST00000364180 107 ntBASIC-1.01□□□□□ -2.57
CHMP4CQ96CF2 SNORD45A-201ENST00000384512 84 ntBASIC-1.01□□□□□ -2.57
CHMP4CQ96CF2 MIR154-201ENST00000385243 84 ntBASIC-1.01□□□□□ -2.57
CHMP4CQ96CF2 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.02□□□□□ -2.57
CHMP4CQ96CF2 MIR517B-201ENST00000385102 67 ntBASIC-1.02□□□□□ -2.57
CHMP4CQ96CF2 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.03□□□□□ -2.57
CHMP4CQ96CF2 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.03□□□□□ -2.57
CHMP4CQ96CF2 RNA5SP173-201ENST00000364857 136 ntBASIC-1.05□□□□□ -2.58
CHMP4CQ96CF2 RNU6-895P-201ENST00000384125 103 ntBASIC-1.05□□□□□ -2.58
CHMP4CQ96CF2 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.05□□□□□ -2.58
CHMP4CQ96CF2 SNORD83B-201ENST00000386745 93 ntBASIC-1.05□□□□□ -2.58
CHMP4CQ96CF2 SNORD114-25-201ENST00000363742 72 ntBASIC-1.06□□□□□ -2.58
CHMP4CQ96CF2 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.06□□□□□ -2.58
CHMP4CQ96CF2 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.06□□□□□ -2.58
CHMP4CQ96CF2 RNU6-587P-201ENST00000391282 106 ntBASIC-1.07□□□□□ -2.58
CHMP4CQ96CF2 RNU7-174P-201ENST00000516248 59 ntBASIC-1.07□□□□□ -2.58
CHMP4CQ96CF2 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.08□□□□□ -2.58
CHMP4CQ96CF2 MIR1302-4-201ENST00000408701 150 ntBASIC-1.08□□□□□ -2.58
CHMP4CQ96CF2 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.09□□□□□ -2.58
CHMP4CQ96CF2 RNU6-573P-201ENST00000383938 106 ntBASIC-1.09□□□□□ -2.58
CHMP4CQ96CF2 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.09□□□□□ -2.58
CHMP4CQ96CF2 RNA5SP215-201ENST00000363440 122 ntBASIC-1.1□□□□□ -2.59
CHMP4CQ96CF2 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.1□□□□□ -2.59
CHMP4CQ96CF2 SNX3P1X-201ENST00000414887 175 ntBASIC-1.1□□□□□ -2.59
CHMP4CQ96CF2 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.1□□□□□ -2.59
CHMP4CQ96CF2 MIR3134-201ENST00000579433 74 ntBASIC-1.1□□□□□ -2.59
CHMP4CQ96CF2 U7.4-201ENST00000614961 63 ntBASIC-1.1□□□□□ -2.59
CHMP4CQ96CF2 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
CHMP4CQ96CF2 MIR548V-201ENST00000584165 80 ntBASIC-1.11□□□□□ -2.59
CHMP4CQ96CF2 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.11□□□□□ -2.59
CHMP4CQ96CF2 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.12□□□□□ -2.59
CHMP4CQ96CF2 RNU6-698P-201ENST00000363523 107 ntBASIC-1.12□□□□□ -2.59
CHMP4CQ96CF2 RNU6-34P-201ENST00000364874 107 ntBASIC-1.12□□□□□ -2.59
CHMP4CQ96CF2 RNU6-411P-201ENST00000384451 107 ntBASIC-1.12□□□□□ -2.59
CHMP4CQ96CF2 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.12□□□□□ -2.59
CHMP4CQ96CF2 AL500527.2-201ENST00000454105 95 ntBASIC-1.12□□□□□ -2.59
CHMP4CQ96CF2 SNORD114-17-201ENST00000364699 75 ntBASIC-1.14□□□□□ -2.59
CHMP4CQ96CF2 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.14□□□□□ -2.59
CHMP4CQ96CF2 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.15□□□□□ -2.59
CHMP4CQ96CF2 uc_338.19-201ENST00000616808 99 ntBASIC-1.15□□□□□ -2.59
CHMP4CQ96CF2 MIR429-201ENST00000362106 83 ntBASIC-1.16□□□□□ -2.6
CHMP4CQ96CF2 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.16□□□□□ -2.6
CHMP4CQ96CF2 MIR587-201ENST00000384845 96 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms