Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SNORD116-22-201ENST00000384430 92 ntBASIC-1.81□□□□□ -2.7
CCDC65Q8IXS2 AC074348.1-201ENST00000426503 132 ntBASIC-1.81□□□□□ -2.7
CCDC65Q8IXS2 RNU6-267P-201ENST00000516714 103 ntBASIC-1.81□□□□□ -2.7
CCDC65Q8IXS2 AP001318.4-201ENST00000616637 121 ntBASIC-1.81□□□□□ -2.7
CCDC65Q8IXS2 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.83□□□□□ -2.7
CCDC65Q8IXS2 MIR8485-201ENST00000401372 91 ntBASIC-1.83□□□□□ -2.7
CCDC65Q8IXS2 RNU6-402P-201ENST00000410678 103 ntBASIC-1.83□□□□□ -2.7
CCDC65Q8IXS2 AL031737.1-201ENST00000450125 223 ntBASIC-1.83□□□□□ -2.7
CCDC65Q8IXS2 MIR3671-201ENST00000580455 88 ntBASIC-1.83□□□□□ -2.7
CCDC65Q8IXS2 AC138207.3-201ENST00000585289 166 ntBASIC-1.83□□□□□ -2.7
CCDC65Q8IXS2 MALAT1.1-201ENST00000618249 95 ntBASIC-1.83□□□□□ -2.7
CCDC65Q8IXS2 MIR548BB-201ENST00000626714 66 ntBASIC-1.83□□□□□ -2.7
CCDC65Q8IXS2 RNU6-164P-201ENST00000364604 103 ntBASIC-1.84□□□□□ -2.7
CCDC65Q8IXS2 RNU6-458P-201ENST00000384179 107 ntBASIC-1.84□□□□□ -2.7
CCDC65Q8IXS2 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.84□□□□□ -2.7
CCDC65Q8IXS2 MIR548C-201ENST00000384815 97 ntBASIC-1.84□□□□□ -2.7
CCDC65Q8IXS2 RNU6-982P-201ENST00000516216 102 ntBASIC-1.84□□□□□ -2.7
CCDC65Q8IXS2 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.84□□□□□ -2.7
CCDC65Q8IXS2 MIR4490-201ENST00000582647 84 ntBASIC-1.84□□□□□ -2.7
CCDC65Q8IXS2 U6.58-201ENST00000613107 107 ntBASIC-1.84□□□□□ -2.7
CCDC65Q8IXS2 RNU6-686P-201ENST00000364839 107 ntBASIC-1.85□□□□□ -2.71
CCDC65Q8IXS2 SNORA8.1-201ENST00000384250 140 ntBASIC-1.85□□□□□ -2.71
CCDC65Q8IXS2 RNU6-587P-201ENST00000391282 106 ntBASIC-1.85□□□□□ -2.71
CCDC65Q8IXS2 AC091912.2-201ENST00000624798 167 ntBASIC-1.85□□□□□ -2.71
CCDC65Q8IXS2 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.86□□□□□ -2.71
CCDC65Q8IXS2 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.86□□□□□ -2.71
CCDC65Q8IXS2 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.86□□□□□ -2.71
CCDC65Q8IXS2 RNU6-604P-201ENST00000390917 100 ntBASIC-1.86□□□□□ -2.71
CCDC65Q8IXS2 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.86□□□□□ -2.71
CCDC65Q8IXS2 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.87□□□□□ -2.71
CCDC65Q8IXS2 AL078595.1-201ENST00000404458 226 ntBASIC-1.87□□□□□ -2.71
CCDC65Q8IXS2 AC090616.4-201ENST00000448026 115 ntBASIC-1.87□□□□□ -2.71
CCDC65Q8IXS2 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.88□□□□□ -2.71
CCDC65Q8IXS2 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.88□□□□□ -2.71
CCDC65Q8IXS2 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.88□□□□□ -2.71
CCDC65Q8IXS2 MT-TR-201ENST00000387439 65 ntBASIC-1.88□□□□□ -2.71
CCDC65Q8IXS2 RNY4P18-201ENST00000391107 89 ntBASIC-1.88□□□□□ -2.71
CCDC65Q8IXS2 MIR889-201ENST00000401280 79 ntBASIC-1.88□□□□□ -2.71
CCDC65Q8IXS2 RPL35AP4-201ENST00000412007 102 ntBASIC-1.88□□□□□ -2.71
CCDC65Q8IXS2 MIR3668-201ENST00000582138 75 ntBASIC-1.88□□□□□ -2.71
CCDC65Q8IXS2 SNORA40.13-201ENST00000516379 120 ntBASIC-1.89□□□□□ -2.71
CCDC65Q8IXS2 SNORD45.1-201ENST00000363181 77 ntBASIC-1.9□□□□□ -2.71
CCDC65Q8IXS2 U4.4-201ENST00000620626 117 ntBASIC-1.9□□□□□ -2.71
CCDC65Q8IXS2 MIR6874-201ENST00000635894 71 ntBASIC-1.9□□□□□ -2.71
CCDC65Q8IXS2 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.91□□□□□ -2.72
CCDC65Q8IXS2 RNU6-696P-201ENST00000390834 107 ntBASIC-1.91□□□□□ -2.72
CCDC65Q8IXS2 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.91□□□□□ -2.72
CCDC65Q8IXS2 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.91□□□□□ -2.72
CCDC65Q8IXS2 RNU6-698P-201ENST00000363523 107 ntBASIC-1.92□□□□□ -2.72
CCDC65Q8IXS2 RNU6-34P-201ENST00000364874 107 ntBASIC-1.92□□□□□ -2.72
CCDC65Q8IXS2 MIR488-201ENST00000365739 83 ntBASIC-1.92□□□□□ -2.72
CCDC65Q8IXS2 RNU6-129P-201ENST00000391022 107 ntBASIC-1.92□□□□□ -2.72
CCDC65Q8IXS2 MIR548Q-201ENST00000408404 100 ntBASIC-1.92□□□□□ -2.72
CCDC65Q8IXS2 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.93□□□□□ -2.72
CCDC65Q8IXS2 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.93□□□□□ -2.72
CCDC65Q8IXS2 MIR6502-201ENST00000617296 76 ntBASIC-1.93□□□□□ -2.72
CCDC65Q8IXS2 RNA5SP331-201ENST00000364986 107 ntBASIC-1.94□□□□□ -2.72
CCDC65Q8IXS2 RNU6-675P-201ENST00000384236 104 ntBASIC-1.94□□□□□ -2.72
CCDC65Q8IXS2 RNU6-755P-201ENST00000364400 103 ntBASIC-1.95□□□□□ -2.72
CCDC65Q8IXS2 RNU6-313P-201ENST00000516317 112 ntBASIC-1.95□□□□□ -2.72
CCDC65Q8IXS2 RNU6-640P-201ENST00000363693 105 ntBASIC-1.96□□□□□ -2.72
CCDC65Q8IXS2 RNU6-598P-201ENST00000364017 105 ntBASIC-1.96□□□□□ -2.72
CCDC65Q8IXS2 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.96□□□□□ -2.72
CCDC65Q8IXS2 SNX3P1X-201ENST00000414887 175 ntBASIC-1.96□□□□□ -2.72
CCDC65Q8IXS2 RNU6-168P-201ENST00000516189 101 ntBASIC-1.96□□□□□ -2.72
CCDC65Q8IXS2 MIR548V-201ENST00000584165 80 ntBASIC-1.96□□□□□ -2.72
CCDC65Q8IXS2 MIR548M-201ENST00000408260 86 ntBASIC-1.97□□□□□ -2.72
CCDC65Q8IXS2 MIR4484-201ENST00000582855 83 ntBASIC-1.98□□□□□ -2.73
CCDC65Q8IXS2 MIR1297-201ENST00000637311 77 ntBASIC-1.98□□□□□ -2.73
CCDC65Q8IXS2 AC006160.2-201ENST00000637708 154 ntBASIC-1.98□□□□□ -2.73
CCDC65Q8IXS2 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.99□□□□□ -2.73
CCDC65Q8IXS2 RNU6-630P-201ENST00000391258 106 ntBASIC-1.99□□□□□ -2.73
CCDC65Q8IXS2 RNU6-608P-201ENST00000383927 104 ntBASIC-2□□□□□ -2.73
CCDC65Q8IXS2 MIR520D-201ENST00000385002 87 ntBASIC-2□□□□□ -2.73
CCDC65Q8IXS2 HLA-S-202ENST00000425174 53 ntBASIC-2□□□□□ -2.73
CCDC65Q8IXS2 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.01□□□□□ -2.73
CCDC65Q8IXS2 MIR429-201ENST00000362106 83 ntBASIC-2.02□□□□□ -2.73
CCDC65Q8IXS2 RNA5SP461-201ENST00000516451 104 ntBASIC-2.02□□□□□ -2.73
CCDC65Q8IXS2 RNU6-844P-201ENST00000517175 102 ntBASIC-2.02□□□□□ -2.73
CCDC65Q8IXS2 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-2.02□□□□□ -2.73
CCDC65Q8IXS2 MIR630-201ENST00000384957 97 ntBASIC-2.03□□□□□ -2.73
CCDC65Q8IXS2 MIR3910-1-201ENST00000580936 111 ntBASIC-2.03□□□□□ -2.73
CCDC65Q8IXS2 U2.18-201ENST00000622185 84 ntBASIC-2.03□□□□□ -2.73
CCDC65Q8IXS2 SNORD113.1-201ENST00000363280 73 ntBASIC-2.04□□□□□ -2.74
CCDC65Q8IXS2 RNA5SP215-201ENST00000363440 122 ntBASIC-2.04□□□□□ -2.74
CCDC65Q8IXS2 SNORD113-1-201ENST00000365321 69 ntBASIC-2.04□□□□□ -2.74
CCDC65Q8IXS2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.04□□□□□ -2.74
CCDC65Q8IXS2 SNORD113-2-201ENST00000391082 72 ntBASIC-2.04□□□□□ -2.74
CCDC65Q8IXS2 MTND4LP1-201ENST00000446263 157 ntBASIC-2.04□□□□□ -2.74
CCDC65Q8IXS2 MIR5591-201ENST00000578248 65 ntBASIC-2.04□□□□□ -2.74
CCDC65Q8IXS2 MIR4520-1-201ENST00000582609 70 ntBASIC-2.04□□□□□ -2.74
CCDC65Q8IXS2 AL627230.5-201ENST00000619807 58 ntBASIC-2.04□□□□□ -2.74
CCDC65Q8IXS2 MIR198-201ENST00000637333 62 ntBASIC-2.04□□□□□ -2.74
CCDC65Q8IXS2 AC018880.2-201ENST00000414265 201 ntBASIC-2.05□□□□□ -2.74
CCDC65Q8IXS2 RNU6-79P-201ENST00000362511 107 ntBASIC-2.06□□□□□ -2.74
CCDC65Q8IXS2 RNU6-32P-201ENST00000383948 107 ntBASIC-2.06□□□□□ -2.74
CCDC65Q8IXS2 RNU6-13P-201ENST00000384248 107 ntBASIC-2.06□□□□□ -2.74
CCDC65Q8IXS2 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.06□□□□□ -2.74
CCDC65Q8IXS2 RNU6-12P-201ENST00000384604 107 ntBASIC-2.06□□□□□ -2.74
CCDC65Q8IXS2 RNU6-41P-201ENST00000384741 107 ntBASIC-2.06□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms