Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MIR3123-201ENST00000583417 75 ntBASIC-2.2□□□□□ -2.76
CLDN18P56856 MIR519C-201ENST00000385053 87 ntBASIC-2.21□□□□□ -2.76
CLDN18P56856 RNU7-61P-201ENST00000515897 61 ntBASIC-2.21□□□□□ -2.76
CLDN18P56856 AC004792.1-201ENST00000614523 137 ntBASIC-2.21□□□□□ -2.76
CLDN18P56856 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.21□□□□□ -2.76
CLDN18P56856 RNU6-698P-201ENST00000363523 107 ntBASIC-2.22□□□□□ -2.76
CLDN18P56856 RNU6-34P-201ENST00000364874 107 ntBASIC-2.22□□□□□ -2.76
CLDN18P56856 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.22□□□□□ -2.76
CLDN18P56856 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.22□□□□□ -2.76
CLDN18P56856 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.23□□□□□ -2.77
CLDN18P56856 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.23□□□□□ -2.77
CLDN18P56856 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.23□□□□□ -2.77
CLDN18P56856 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.24□□□□□ -2.77
CLDN18P56856 MIR3170-201ENST00000582699 77 ntBASIC-2.24□□□□□ -2.77
CLDN18P56856 MIR664B-201ENST00000626756 61 ntBASIC-2.24□□□□□ -2.77
CLDN18P56856 RNU6-563P-201ENST00000364872 108 ntBASIC-2.25□□□□□ -2.77
CLDN18P56856 MTND5P41-201ENST00000517498 206 ntBASIC-2.25□□□□□ -2.77
CLDN18P56856 MIR3675-201ENST00000583661 73 ntBASIC-2.25□□□□□ -2.77
CLDN18P56856 MIR548AM-201ENST00000584298 74 ntBASIC-2.25□□□□□ -2.77
CLDN18P56856 U4.4-201ENST00000620626 117 ntBASIC-2.25□□□□□ -2.77
CLDN18P56856 U2.18-201ENST00000622185 84 ntBASIC-2.25□□□□□ -2.77
CLDN18P56856 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.26□□□□□ -2.77
CLDN18P56856 RNU6-257P-201ENST00000410238 98 ntBASIC-2.26□□□□□ -2.77
CLDN18P56856 RNU6-118P-201ENST00000516552 102 ntBASIC-2.26□□□□□ -2.77
CLDN18P56856 U7.3-201ENST00000616123 62 ntBASIC-2.26□□□□□ -2.77
CLDN18P56856 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.26□□□□□ -2.77
CLDN18P56856 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.27□□□□□ -2.77
CLDN18P56856 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.27□□□□□ -2.77
CLDN18P56856 MIR548AA1-201ENST00000384971 97 ntBASIC-2.27□□□□□ -2.77
CLDN18P56856 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.27□□□□□ -2.77
CLDN18P56856 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.28□□□□□ -2.77
CLDN18P56856 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.28□□□□□ -2.77
CLDN18P56856 MTATP8P2-201ENST00000435212 202 ntBASIC-2.28□□□□□ -2.77
CLDN18P56856 RNU6-162P-201ENST00000516228 103 ntBASIC-2.28□□□□□ -2.77
CLDN18P56856 MIR548V-201ENST00000584165 80 ntBASIC-2.28□□□□□ -2.77
CLDN18P56856 RNU6-624P-201ENST00000363411 107 ntBASIC-2.29□□□□□ -2.78
CLDN18P56856 SNORD115-37-201ENST00000363768 82 ntBASIC-2.29□□□□□ -2.78
CLDN18P56856 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.29□□□□□ -2.78
CLDN18P56856 MIR590-201ENST00000385008 97 ntBASIC-2.29□□□□□ -2.78
CLDN18P56856 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.29□□□□□ -2.78
CLDN18P56856 MIR4756-201ENST00000577874 78 ntBASIC-2.29□□□□□ -2.78
CLDN18P56856 AL353621.2-201ENST00000605340 133 ntBASIC-2.29□□□□□ -2.78
CLDN18P56856 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.29□□□□□ -2.78
CLDN18P56856 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.3□□□□□ -2.78
CLDN18P56856 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.3□□□□□ -2.78
CLDN18P56856 RNU6-604P-201ENST00000390917 100 ntBASIC-2.3□□□□□ -2.78
CLDN18P56856 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.3□□□□□ -2.78
CLDN18P56856 RNU6-982P-201ENST00000516216 102 ntBASIC-2.3□□□□□ -2.78
CLDN18P56856 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.3□□□□□ -2.78
CLDN18P56856 RNU6-303P-201ENST00000517091 106 ntBASIC-2.3□□□□□ -2.78
CLDN18P56856 RNU6-330P-201ENST00000363015 107 ntBASIC-2.31□□□□□ -2.78
CLDN18P56856 SNORA8.1-201ENST00000384250 140 ntBASIC-2.31□□□□□ -2.78
CLDN18P56856 MIR496-201ENST00000385226 102 ntBASIC-2.31□□□□□ -2.78
CLDN18P56856 RNU6-258P-201ENST00000390884 101 ntBASIC-2.31□□□□□ -2.78
CLDN18P56856 MIR1302-5-201ENST00000408164 150 ntBASIC-2.31□□□□□ -2.78
CLDN18P56856 RNU6-659P-201ENST00000516454 104 ntBASIC-2.31□□□□□ -2.78
CLDN18P56856 RNU6-971P-201ENST00000516920 106 ntBASIC-2.31□□□□□ -2.78
CLDN18P56856 RNU6-247P-201ENST00000362636 107 ntBASIC-2.32□□□□□ -2.78
CLDN18P56856 SNORD116-21-201ENST00000384507 92 ntBASIC-2.32□□□□□ -2.78
CLDN18P56856 RNU6-633P-201ENST00000362612 103 ntBASIC-2.33□□□□□ -2.78
CLDN18P56856 SNORD116-16-201ENST00000384533 92 ntBASIC-2.33□□□□□ -2.78
CLDN18P56856 RNU6-182P-201ENST00000516970 105 ntBASIC-2.33□□□□□ -2.78
CLDN18P56856 RNU6-388P-201ENST00000517012 105 ntBASIC-2.33□□□□□ -2.78
CLDN18P56856 RNU6-389P-201ENST00000517048 105 ntBASIC-2.33□□□□□ -2.78
CLDN18P56856 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.33□□□□□ -2.78
CLDN18P56856 SNORD45.1-201ENST00000363181 77 ntBASIC-2.34□□□□□ -2.78
CLDN18P56856 RNU6-379P-201ENST00000363813 104 ntBASIC-2.34□□□□□ -2.78
CLDN18P56856 RNU6-557P-201ENST00000516842 110 ntBASIC-2.34□□□□□ -2.78
CLDN18P56856 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.35□□□□□ -2.79
CLDN18P56856 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.35□□□□□ -2.79
CLDN18P56856 AC074348.1-201ENST00000426503 132 ntBASIC-2.35□□□□□ -2.79
CLDN18P56856 MTND4LP1-201ENST00000446263 157 ntBASIC-2.35□□□□□ -2.79
CLDN18P56856 RNU6-980P-201ENST00000516925 103 ntBASIC-2.35□□□□□ -2.79
CLDN18P56856 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.35□□□□□ -2.79
CLDN18P56856 RNA5SP215-201ENST00000363440 122 ntBASIC-2.36□□□□□ -2.79
CLDN18P56856 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.36□□□□□ -2.79
CLDN18P56856 SNORD113-2-201ENST00000391082 72 ntBASIC-2.36□□□□□ -2.79
CLDN18P56856 AC093729.1-201ENST00000513074 128 ntBASIC-2.36□□□□□ -2.79
CLDN18P56856 RNU7-200P-201ENST00000516105 62 ntBASIC-2.36□□□□□ -2.79
CLDN18P56856 RNU6-766P-201ENST00000362478 107 ntBASIC-2.37□□□□□ -2.79
CLDN18P56856 MIR630-201ENST00000384957 97 ntBASIC-2.37□□□□□ -2.79
CLDN18P56856 SNORA27.2-201ENST00000363365 126 ntBASIC-2.38□□□□□ -2.79
CLDN18P56856 RNY4P7-201ENST00000364600 96 ntBASIC-2.38□□□□□ -2.79
CLDN18P56856 RNU4-88P-201ENST00000411220 86 ntBASIC-2.38□□□□□ -2.79
CLDN18P56856 RNU6-109P-201ENST00000516364 107 ntBASIC-2.38□□□□□ -2.79
CLDN18P56856 RNU6-184P-201ENST00000516514 107 ntBASIC-2.38□□□□□ -2.79
CLDN18P56856 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.38□□□□□ -2.79
CLDN18P56856 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.38□□□□□ -2.79
CLDN18P56856 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.39□□□□□ -2.79
CLDN18P56856 RNU6-995P-201ENST00000391244 107 ntBASIC-2.39□□□□□ -2.79
CLDN18P56856 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.39□□□□□ -2.79
CLDN18P56856 SNORD1B-201ENST00000363091 84 ntBASIC-2.4□□□□□ -2.79
CLDN18P56856 RNU6-686P-201ENST00000364839 107 ntBASIC-2.4□□□□□ -2.79
CLDN18P56856 RNA5SP173-201ENST00000364857 136 ntBASIC-2.4□□□□□ -2.79
CLDN18P56856 RNU6-886P-201ENST00000384319 105 ntBASIC-2.4□□□□□ -2.79
CLDN18P56856 RNU6-463P-201ENST00000384340 107 ntBASIC-2.4□□□□□ -2.79
CLDN18P56856 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.41□□□□□ -2.8
CLDN18P56856 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.41□□□□□ -2.8
CLDN18P56856 MIR4668-201ENST00000582284 70 ntBASIC-2.41□□□□□ -2.8
CLDN18P56856 AC013734.1-201ENST00000619329 111 ntBASIC-2.41□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 278 ms