Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 AL445584.3-201ENST00000617173 78 ntBASIC-0.6□□□□□ -2.51
PAX9P55771 MIR3179-4-201ENST00000617599 84 ntBASIC-0.6□□□□□ -2.51
PAX9P55771 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.6□□□□□ -2.51
PAX9P55771 MIR124-2-201ENST00000385081 109 ntBASIC-0.61□□□□□ -2.51
PAX9P55771 AL021921.1-201ENST00000442774 93 ntBASIC-0.61□□□□□ -2.51
PAX9P55771 MIR3681-201ENST00000580089 72 ntBASIC-0.61□□□□□ -2.51
PAX9P55771 SNORD74.6-201ENST00000364796 70 ntBASIC-0.62□□□□□ -2.51
PAX9P55771 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.62□□□□□ -2.51
PAX9P55771 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.63□□□□□ -2.51
PAX9P55771 MIR224-201ENST00000384889 81 ntBASIC-0.63□□□□□ -2.51
PAX9P55771 AC021146.6-201ENST00000514659 117 ntBASIC-0.63□□□□□ -2.51
PAX9P55771 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.63□□□□□ -2.51
PAX9P55771 MIR548AG1-201ENST00000579932 66 ntBASIC-0.63□□□□□ -2.51
PAX9P55771 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.63□□□□□ -2.51
PAX9P55771 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.64□□□□□ -2.51
PAX9P55771 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.64□□□□□ -2.51
PAX9P55771 RNU4-63P-201ENST00000411313 118 ntBASIC-0.64□□□□□ -2.51
PAX9P55771 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.65□□□□□ -2.51
PAX9P55771 SNORD45A-201ENST00000384512 84 ntBASIC-0.65□□□□□ -2.51
PAX9P55771 MIR548C-201ENST00000384815 97 ntBASIC-0.65□□□□□ -2.51
PAX9P55771 RNY4P29-201ENST00000410801 97 ntBASIC-0.65□□□□□ -2.51
PAX9P55771 AP000533.3-201ENST00000447704 118 ntBASIC-0.65□□□□□ -2.51
PAX9P55771 SNORD113.1-201ENST00000363280 73 ntBASIC-0.66□□□□□ -2.52
PAX9P55771 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.66□□□□□ -2.52
PAX9P55771 MIR604-201ENST00000384880 94 ntBASIC-0.66□□□□□ -2.52
PAX9P55771 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.66□□□□□ -2.52
PAX9P55771 AC108676.2-201ENST00000605225 163 ntBASIC-0.66□□□□□ -2.52
PAX9P55771 MIR8053-201ENST00000613344 75 ntBASIC-0.66□□□□□ -2.52
PAX9P55771 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.67□□□□□ -2.52
PAX9P55771 SNORD18.2-201ENST00000459604 70 ntBASIC-0.67□□□□□ -2.52
PAX9P55771 RNU7-174P-201ENST00000516248 59 ntBASIC-0.67□□□□□ -2.52
PAX9P55771 RNA5SP368-201ENST00000364298 116 ntBASIC-0.68□□□□□ -2.52
PAX9P55771 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.68□□□□□ -2.52
PAX9P55771 MIR517B-201ENST00000385102 67 ntBASIC-0.68□□□□□ -2.52
PAX9P55771 SNORA26.2-201ENST00000390922 122 ntBASIC-0.68□□□□□ -2.52
PAX9P55771 RNU6-70P-201ENST00000516438 60 ntBASIC-0.68□□□□□ -2.52
PAX9P55771 RNA5SP173-201ENST00000364857 136 ntBASIC-0.69□□□□□ -2.52
PAX9P55771 RNU6-573P-201ENST00000383938 106 ntBASIC-0.69□□□□□ -2.52
PAX9P55771 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.69□□□□□ -2.52
PAX9P55771 MIR3134-201ENST00000579433 74 ntBASIC-0.69□□□□□ -2.52
PAX9P55771 MTND4LP1-201ENST00000446263 157 ntBASIC-0.7□□□□□ -2.52
PAX9P55771 RNU6-35P-201ENST00000384530 107 ntBASIC-0.71□□□□□ -2.52
PAX9P55771 RNU6-758P-201ENST00000516292 89 ntBASIC-0.72□□□□□ -2.52
PAX9P55771 MIR3202-2-201ENST00000635980 79 ntBASIC-0.72□□□□□ -2.52
PAX9P55771 RNU6-228P-201ENST00000362700 106 ntBASIC-0.73□□□□□ -2.53
PAX9P55771 RNU6-924P-201ENST00000362926 108 ntBASIC-0.73□□□□□ -2.53
PAX9P55771 RNU6-246P-201ENST00000384702 107 ntBASIC-0.73□□□□□ -2.53
PAX9P55771 MT-TQ-201ENST00000387372 72 ntBASIC-0.73□□□□□ -2.53
PAX9P55771 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
PAX9P55771 RNU6-587P-201ENST00000391282 106 ntBASIC-0.73□□□□□ -2.53
PAX9P55771 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.73□□□□□ -2.53
PAX9P55771 RNU6-668P-201ENST00000364180 107 ntBASIC-0.74□□□□□ -2.53
PAX9P55771 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.74□□□□□ -2.53
PAX9P55771 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.74□□□□□ -2.53
PAX9P55771 MIR154-201ENST00000385243 84 ntBASIC-0.74□□□□□ -2.53
PAX9P55771 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.74□□□□□ -2.53
PAX9P55771 U4.4-201ENST00000620626 117 ntBASIC-0.74□□□□□ -2.53
PAX9P55771 SNORD114-17-201ENST00000364699 75 ntBASIC-0.75□□□□□ -2.53
PAX9P55771 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.75□□□□□ -2.53
PAX9P55771 SNORD115-31-201ENST00000365318 82 ntBASIC-0.75□□□□□ -2.53
PAX9P55771 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.75□□□□□ -2.53
PAX9P55771 RNU6-687P-201ENST00000516443 89 ntBASIC-0.75□□□□□ -2.53
PAX9P55771 MIR4679-1-201ENST00000637619 75 ntBASIC-0.75□□□□□ -2.53
PAX9P55771 RNU6-698P-201ENST00000363523 107 ntBASIC-0.76□□□□□ -2.53
PAX9P55771 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.76□□□□□ -2.53
PAX9P55771 RNU6-34P-201ENST00000364874 107 ntBASIC-0.76□□□□□ -2.53
PAX9P55771 MIR1255A-201ENST00000408338 113 ntBASIC-0.76□□□□□ -2.53
PAX9P55771 MIR1265-201ENST00000408444 86 ntBASIC-0.76□□□□□ -2.53
PAX9P55771 SCARNA17-201ENST00000516183 144 ntBASIC-0.76□□□□□ -2.53
PAX9P55771 MIR548V-201ENST00000584165 80 ntBASIC-0.76□□□□□ -2.53
PAX9P55771 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.77□□□□□ -2.53
PAX9P55771 SNORD116-24-201ENST00000384549 92 ntBASIC-0.77□□□□□ -2.53
PAX9P55771 MIR196A1-201ENST00000388006 70 ntBASIC-0.77□□□□□ -2.53
PAX9P55771 MIR1302-4-201ENST00000408701 150 ntBASIC-0.77□□□□□ -2.53
PAX9P55771 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.77□□□□□ -2.53
PAX9P55771 Z95118.1-201ENST00000421372 247 ntBASIC-0.77□□□□□ -2.53
PAX9P55771 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.78□□□□□ -2.53
PAX9P55771 RNA5SP215-201ENST00000363440 122 ntBASIC-0.78□□□□□ -2.53
PAX9P55771 SNORD95.1-201ENST00000364099 68 ntBASIC-0.79□□□□□ -2.54
PAX9P55771 MIR630-201ENST00000384957 97 ntBASIC-0.79□□□□□ -2.54
PAX9P55771 U7.4-201ENST00000614961 63 ntBASIC-0.79□□□□□ -2.54
PAX9P55771 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.8□□□□□ -2.54
PAX9P55771 RNU6-895P-201ENST00000384125 103 ntBASIC-0.8□□□□□ -2.54
PAX9P55771 RNU6-411P-201ENST00000384451 107 ntBASIC-0.8□□□□□ -2.54
PAX9P55771 AL500527.2-201ENST00000454105 95 ntBASIC-0.8□□□□□ -2.54
PAX9P55771 RNU7-88P-201ENST00000458752 63 ntBASIC-0.8□□□□□ -2.54
PAX9P55771 RNU6-857P-201ENST00000515893 110 ntBASIC-0.8□□□□□ -2.54
PAX9P55771 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.8□□□□□ -2.54
PAX9P55771 U7.5-201ENST00000517224 61 ntBASIC-0.8□□□□□ -2.54
PAX9P55771 RNU6-431P-201ENST00000383874 107 ntBASIC-0.81□□□□□ -2.54
PAX9P55771 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.81□□□□□ -2.54
PAX9P55771 RNU6-279P-201ENST00000391297 101 ntBASIC-0.81□□□□□ -2.54
PAX9P55771 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.82□□□□□ -2.54
PAX9P55771 RNU6-458P-201ENST00000384179 107 ntBASIC-0.82□□□□□ -2.54
PAX9P55771 MIR147A-201ENST00000385079 72 ntBASIC-0.82□□□□□ -2.54
PAX9P55771 SNORD78.1-201ENST00000390866 65 ntBASIC-0.82□□□□□ -2.54
PAX9P55771 U6.58-201ENST00000613107 107 ntBASIC-0.82□□□□□ -2.54
PAX9P55771 SNORD114-25-201ENST00000363742 72 ntBASIC-0.83□□□□□ -2.54
PAX9P55771 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.83□□□□□ -2.54
PAX9P55771 MIR527-201ENST00000385244 85 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms