Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SNORD19-201ENST00000391191 68 ntBASIC-1.61□□□□□ -2.67
PKNOX1P55347 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.61□□□□□ -2.67
PKNOX1P55347 RNU7-88P-201ENST00000458752 63 ntBASIC-1.61□□□□□ -2.67
PKNOX1P55347 AC093729.1-201ENST00000513074 128 ntBASIC-1.61□□□□□ -2.67
PKNOX1P55347 MIR2052-201ENST00000636055 55 ntBASIC-1.61□□□□□ -2.67
PKNOX1P55347 MIR1285-2-201ENST00000408311 88 ntBASIC-1.62□□□□□ -2.67
PKNOX1P55347 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.62□□□□□ -2.67
PKNOX1P55347 HLA-S-202ENST00000425174 53 ntBASIC-1.63□□□□□ -2.67
PKNOX1P55347 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.63□□□□□ -2.67
PKNOX1P55347 MIR3671-201ENST00000580455 88 ntBASIC-1.63□□□□□ -2.67
PKNOX1P55347 MIR3668-201ENST00000582138 75 ntBASIC-1.63□□□□□ -2.67
PKNOX1P55347 MIR4520-1-201ENST00000582609 70 ntBASIC-1.63□□□□□ -2.67
PKNOX1P55347 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.64□□□□□ -2.67
PKNOX1P55347 MIR5683-201ENST00000636514 76 ntBASIC-1.64□□□□□ -2.67
PKNOX1P55347 MIR365A-201ENST00000362260 87 ntBASIC-1.65□□□□□ -2.67
PKNOX1P55347 MIR450A1-201ENST00000362262 91 ntBASIC-1.65□□□□□ -2.67
PKNOX1P55347 RNU6-330P-201ENST00000363015 107 ntBASIC-1.65□□□□□ -2.67
PKNOX1P55347 RNU6-164P-201ENST00000364604 103 ntBASIC-1.65□□□□□ -2.67
PKNOX1P55347 RNU6-219P-201ENST00000364728 107 ntBASIC-1.65□□□□□ -2.67
PKNOX1P55347 RNU6-497P-201ENST00000365316 104 ntBASIC-1.65□□□□□ -2.67
PKNOX1P55347 RNU6-22P-201ENST00000384355 107 ntBASIC-1.65□□□□□ -2.67
PKNOX1P55347 RPL35AP4-201ENST00000412007 102 ntBASIC-1.65□□□□□ -2.67
PKNOX1P55347 AL031737.1-201ENST00000450125 223 ntBASIC-1.65□□□□□ -2.67
PKNOX1P55347 MIR5591-201ENST00000578248 65 ntBASIC-1.65□□□□□ -2.67
PKNOX1P55347 RNU6-557P-201ENST00000516842 110 ntBASIC-1.66□□□□□ -2.68
PKNOX1P55347 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.66□□□□□ -2.68
PKNOX1P55347 MIR4441-201ENST00000582623 100 ntBASIC-1.66□□□□□ -2.68
PKNOX1P55347 MIR4490-201ENST00000582647 84 ntBASIC-1.66□□□□□ -2.68
PKNOX1P55347 U4.2-201ENST00000618561 85 ntBASIC-1.66□□□□□ -2.68
PKNOX1P55347 SNORD116-22-201ENST00000384430 92 ntBASIC-1.67□□□□□ -2.68
PKNOX1P55347 MIR548C-201ENST00000384815 97 ntBASIC-1.67□□□□□ -2.68
PKNOX1P55347 RNU6-303P-201ENST00000517091 106 ntBASIC-1.67□□□□□ -2.68
PKNOX1P55347 MIR6502-201ENST00000617296 76 ntBASIC-1.67□□□□□ -2.68
PKNOX1P55347 MALAT1.1-201ENST00000618249 95 ntBASIC-1.67□□□□□ -2.68
PKNOX1P55347 MIR3675-201ENST00000583661 73 ntBASIC-1.68□□□□□ -2.68
PKNOX1P55347 AP001318.4-201ENST00000616637 121 ntBASIC-1.68□□□□□ -2.68
PKNOX1P55347 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.69□□□□□ -2.68
PKNOX1P55347 MT-TR-201ENST00000387439 65 ntBASIC-1.69□□□□□ -2.68
PKNOX1P55347 RNU6-402P-201ENST00000410678 103 ntBASIC-1.69□□□□□ -2.68
PKNOX1P55347 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.69□□□□□ -2.68
PKNOX1P55347 RNU6-267P-201ENST00000516714 103 ntBASIC-1.69□□□□□ -2.68
PKNOX1P55347 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.69□□□□□ -2.68
PKNOX1P55347 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.69□□□□□ -2.68
PKNOX1P55347 RNU6-478P-201ENST00000363904 110 ntBASIC-1.7□□□□□ -2.68
PKNOX1P55347 SNORA8.1-201ENST00000384250 140 ntBASIC-1.7□□□□□ -2.68
PKNOX1P55347 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.7□□□□□ -2.68
PKNOX1P55347 RNU7-174P-201ENST00000516248 59 ntBASIC-1.7□□□□□ -2.68
PKNOX1P55347 MIR548BB-201ENST00000626714 66 ntBASIC-1.7□□□□□ -2.68
PKNOX1P55347 AC074348.1-201ENST00000426503 132 ntBASIC-1.71□□□□□ -2.68
PKNOX1P55347 AC090616.4-201ENST00000448026 115 ntBASIC-1.71□□□□□ -2.68
PKNOX1P55347 MIR1246-201ENST00000636535 73 ntBASIC-1.71□□□□□ -2.68
PKNOX1P55347 RNU6-604P-201ENST00000390917 100 ntBASIC-1.72□□□□□ -2.68
PKNOX1P55347 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.72□□□□□ -2.68
PKNOX1P55347 SNORA40.13-201ENST00000516379 120 ntBASIC-1.72□□□□□ -2.68
PKNOX1P55347 RNU6-686P-201ENST00000364839 107 ntBASIC-1.73□□□□□ -2.69
PKNOX1P55347 RNU6-458P-201ENST00000384179 107 ntBASIC-1.73□□□□□ -2.69
PKNOX1P55347 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.73□□□□□ -2.69
PKNOX1P55347 RNY4P18-201ENST00000391107 89 ntBASIC-1.73□□□□□ -2.69
PKNOX1P55347 RNU6-982P-201ENST00000516216 102 ntBASIC-1.73□□□□□ -2.69
PKNOX1P55347 MIR4770-201ENST00000579149 58 ntBASIC-1.73□□□□□ -2.69
PKNOX1P55347 U6.58-201ENST00000613107 107 ntBASIC-1.73□□□□□ -2.69
PKNOX1P55347 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.74□□□□□ -2.69
PKNOX1P55347 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.74□□□□□ -2.69
PKNOX1P55347 MIR548Q-201ENST00000408404 100 ntBASIC-1.74□□□□□ -2.69
PKNOX1P55347 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.74□□□□□ -2.69
PKNOX1P55347 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.75□□□□□ -2.69
PKNOX1P55347 RNU6-313P-201ENST00000516317 112 ntBASIC-1.75□□□□□ -2.69
PKNOX1P55347 SNORD114-3-201ENST00000364969 75 ntBASIC-1.76□□□□□ -2.69
PKNOX1P55347 MIR548M-201ENST00000408260 86 ntBASIC-1.76□□□□□ -2.69
PKNOX1P55347 RNU6-168P-201ENST00000516189 101 ntBASIC-1.76□□□□□ -2.69
PKNOX1P55347 RNU6-226P-201ENST00000363778 107 ntBASIC-1.77□□□□□ -2.69
PKNOX1P55347 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.77□□□□□ -2.69
PKNOX1P55347 RNU6-696P-201ENST00000390834 107 ntBASIC-1.77□□□□□ -2.69
PKNOX1P55347 SNORD45.1-201ENST00000363181 77 ntBASIC-1.78□□□□□ -2.69
PKNOX1P55347 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.78□□□□□ -2.69
PKNOX1P55347 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.78□□□□□ -2.69
PKNOX1P55347 RNU6-129P-201ENST00000391022 107 ntBASIC-1.78□□□□□ -2.69
PKNOX1P55347 RNU6-587P-201ENST00000391282 106 ntBASIC-1.78□□□□□ -2.69
PKNOX1P55347 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.78□□□□□ -2.69
PKNOX1P55347 MIR488-201ENST00000365739 83 ntBASIC-1.79□□□□□ -2.7
PKNOX1P55347 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.79□□□□□ -2.7
PKNOX1P55347 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.8□□□□□ -2.7
PKNOX1P55347 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.81□□□□□ -2.7
PKNOX1P55347 RNU6-698P-201ENST00000363523 107 ntBASIC-1.81□□□□□ -2.7
PKNOX1P55347 RNU6-755P-201ENST00000364400 103 ntBASIC-1.81□□□□□ -2.7
PKNOX1P55347 RNU6-34P-201ENST00000364874 107 ntBASIC-1.81□□□□□ -2.7
PKNOX1P55347 RNU6-675P-201ENST00000384236 104 ntBASIC-1.81□□□□□ -2.7
PKNOX1P55347 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.81□□□□□ -2.7
PKNOX1P55347 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.81□□□□□ -2.7
PKNOX1P55347 U4.4-201ENST00000620626 117 ntBASIC-1.81□□□□□ -2.7
PKNOX1P55347 RNU6-640P-201ENST00000363693 105 ntBASIC-1.82□□□□□ -2.7
PKNOX1P55347 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.82□□□□□ -2.7
PKNOX1P55347 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.82□□□□□ -2.7
PKNOX1P55347 AC018880.2-201ENST00000414265 201 ntBASIC-1.82□□□□□ -2.7
PKNOX1P55347 MIR429-201ENST00000362106 83 ntBASIC-1.83□□□□□ -2.7
PKNOX1P55347 RNA5SP86-201ENST00000390869 98 ntBASIC-1.83□□□□□ -2.7
PKNOX1P55347 MIR4484-201ENST00000582855 83 ntBASIC-1.83□□□□□ -2.7
PKNOX1P55347 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.84□□□□□ -2.7
PKNOX1P55347 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.84□□□□□ -2.7
PKNOX1P55347 MIR4723-201ENST00000585070 81 ntBASIC-1.84□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms