Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MIR1255B2-201ENST00000408618 67 ntBASIC0.25□□□□□ -2.37
MRE11P49959 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.25□□□□□ -2.37
MRE11P49959 AP000676.1-201ENST00000533307 52 ntBASIC0.25□□□□□ -2.37
MRE11P49959 MIR4511-201ENST00000582784 87 ntBASIC0.25□□□□□ -2.37
MRE11P49959 MIR548V-201ENST00000584165 80 ntBASIC0.25□□□□□ -2.37
MRE11P49959 AC103706.3-201ENST00000636297 85 ntBASIC0.25□□□□□ -2.37
MRE11P49959 SNORA42.1-201ENST00000363515 137 ntBASIC0.24□□□□□ -2.37
MRE11P49959 Y_RNA.340-201ENST00000365330 92 ntBASIC0.24□□□□□ -2.37
MRE11P49959 RNU6-46P-201ENST00000383860 107 ntBASIC0.24□□□□□ -2.37
MRE11P49959 MIR517B-201ENST00000385102 67 ntBASIC0.24□□□□□ -2.37
MRE11P49959 MIR892B-201ENST00000401279 77 ntBASIC0.24□□□□□ -2.37
MRE11P49959 RNA5SP163-201ENST00000410304 99 ntBASIC0.24□□□□□ -2.37
MRE11P49959 RNU6-180P-201ENST00000516697 61 ntBASIC0.24□□□□□ -2.37
MRE11P49959 CR383656.4-201ENST00000546909 122 ntBASIC0.24□□□□□ -2.37
MRE11P49959 AC104408.1-201ENST00000605241 170 ntBASIC0.24□□□□□ -2.37
MRE11P49959 MIR371B-201ENST00000638082 66 ntBASIC0.24□□□□□ -2.37
MRE11P49959 MIR610-201ENST00000385139 96 ntBASIC0.23□□□□□ -2.37
MRE11P49959 AC125388.1-201ENST00000459631 156 ntBASIC0.23□□□□□ -2.37
MRE11P49959 MIR4743-201ENST00000584576 69 ntBASIC0.23□□□□□ -2.37
MRE11P49959 RNU6-698P-201ENST00000363523 107 ntBASIC0.22□□□□□ -2.37
MRE11P49959 RNU6-34P-201ENST00000364874 107 ntBASIC0.22□□□□□ -2.37
MRE11P49959 RNU6-302P-201ENST00000365249 107 ntBASIC0.22□□□□□ -2.37
MRE11P49959 MIR593-201ENST00000384856 100 ntBASIC0.22□□□□□ -2.37
MRE11P49959 AL021921.1-201ENST00000442774 93 ntBASIC0.22□□□□□ -2.37
MRE11P49959 RNU6-518P-201ENST00000516056 96 ntBASIC0.22□□□□□ -2.37
MRE11P49959 RNA5SP214-201ENST00000363378 118 ntBASIC0.21□□□□□ -2.38
MRE11P49959 MIR1207-201ENST00000408249 87 ntBASIC0.21□□□□□ -2.38
MRE11P49959 MIR1295A-201ENST00000408463 79 ntBASIC0.21□□□□□ -2.38
MRE11P49959 SCARNA21.1-201ENST00000515996 128 ntBASIC0.21□□□□□ -2.38
MRE11P49959 MIR548AX-201ENST00000580117 73 ntBASIC0.21□□□□□ -2.38
MRE11P49959 MIR148A-201ENST00000362215 68 ntBASIC0.2□□□□□ -2.38
MRE11P49959 MIR630-201ENST00000384957 97 ntBASIC0.2□□□□□ -2.38
MRE11P49959 MIR145-201ENST00000384967 88 ntBASIC0.2□□□□□ -2.38
MRE11P49959 SNORD114-9-201ENST00000364370 72 ntBASIC0.19□□□□□ -2.38
MRE11P49959 MIR519A2-201ENST00000384990 87 ntBASIC0.19□□□□□ -2.38
MRE11P49959 U4.4-201ENST00000620626 117 ntBASIC0.19□□□□□ -2.38
MRE11P49959 RNA5SP470-201ENST00000516463 106 ntBASIC0.18□□□□□ -2.38
MRE11P49959 U4.2-201ENST00000618561 85 ntBASIC0.18□□□□□ -2.38
MRE11P49959 Y_RNA.246-201ENST00000364495 108 ntBASIC0.17□□□□□ -2.38
MRE11P49959 MIR601-201ENST00000385256 79 ntBASIC0.17□□□□□ -2.38
MRE11P49959 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
MRE11P49959 RNU7-165P-201ENST00000458864 60 ntBASIC0.17□□□□□ -2.38
MRE11P49959 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.17□□□□□ -2.38
MRE11P49959 MIR6507-201ENST00000613630 70 ntBASIC0.17□□□□□ -2.38
MRE11P49959 SNORD115-23-201ENST00000364461 82 ntBASIC0.16□□□□□ -2.38
MRE11P49959 RNU6-1184P-201ENST00000384588 108 ntBASIC0.16□□□□□ -2.38
MRE11P49959 SNORD113-2-201ENST00000391082 72 ntBASIC0.16□□□□□ -2.38
MRE11P49959 RNU7-159P-201ENST00000459284 62 ntBASIC0.16□□□□□ -2.38
MRE11P49959 RNU7-154P-201ENST00000516194 62 ntBASIC0.16□□□□□ -2.38
MRE11P49959 MIR4645-201ENST00000583158 77 ntBASIC0.16□□□□□ -2.38
MRE11P49959 SNORD114-5-201ENST00000362928 70 ntBASIC0.15□□□□□ -2.39
MRE11P49959 MIR224-201ENST00000384889 81 ntBASIC0.15□□□□□ -2.39
MRE11P49959 Y_RNA.325-201ENST00000365171 122 ntBASIC0.14□□□□□ -2.39
MRE11P49959 RNU6-1246P-201ENST00000391064 107 ntBASIC0.14□□□□□ -2.39
MRE11P49959 RNU7-55P-201ENST00000459426 62 ntBASIC0.14□□□□□ -2.39
MRE11P49959 SNORA25.5-201ENST00000363782 126 ntBASIC0.13□□□□□ -2.39
MRE11P49959 RNU6-900P-201ENST00000384498 102 ntBASIC0.13□□□□□ -2.39
MRE11P49959 RNU6-455P-201ENST00000384681 107 ntBASIC0.13□□□□□ -2.39
MRE11P49959 MIR9-2-201ENST00000384838 87 ntBASIC0.13□□□□□ -2.39
MRE11P49959 AC110620.1-201ENST00000416042 228 ntBASIC0.13□□□□□ -2.39
MRE11P49959 RNU6-92P-201ENST00000605893 104 ntBASIC0.13□□□□□ -2.39
MRE11P49959 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.12□□□□□ -2.39
MRE11P49959 MIR198-201ENST00000637333 62 ntBASIC0.12□□□□□ -2.39
MRE11P49959 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.11□□□□□ -2.39
MRE11P49959 RNU6-669P-201ENST00000365575 107 ntBASIC0.11□□□□□ -2.39
MRE11P49959 RNA5SP451-201ENST00000410588 110 ntBASIC0.11□□□□□ -2.39
MRE11P49959 AL353803.5-201ENST00000599815 141 ntBASIC0.11□□□□□ -2.39
MRE11P49959 snoR1.1-201ENST00000628177 80 ntBASIC0.11□□□□□ -2.39
MRE11P49959 Y_RNA.74-201ENST00000362911 99 ntBASIC0.1□□□□□ -2.39
MRE11P49959 RNA5SP192-201ENST00000364404 120 ntBASIC0.1□□□□□ -2.39
MRE11P49959 MIR214-201ENST00000385214 110 ntBASIC0.1□□□□□ -2.39
MRE11P49959 AC244250.2-201ENST00000418731 148 ntBASIC0.1□□□□□ -2.39
MRE11P49959 MIR4432-201ENST00000581823 84 ntBASIC0.1□□□□□ -2.39
MRE11P49959 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.1□□□□□ -2.39
MRE11P49959 AL391099.1-201ENST00000624635 187 ntBASIC0.1□□□□□ -2.39
MRE11P49959 RNU6-973P-201ENST00000364690 107 ntBASIC0.09□□□□□ -2.4
MRE11P49959 Y_RNA.514-201ENST00000384528 112 ntBASIC0.09□□□□□ -2.4
MRE11P49959 MIR548AG1-201ENST00000579932 66 ntBASIC0.09□□□□□ -2.4
MRE11P49959 uc_338.36-201ENST00000622331 158 ntBASIC0.09□□□□□ -2.4
MRE11P49959 RNU6-929P-201ENST00000384429 107 ntBASIC0.08□□□□□ -2.4
MRE11P49959 RNU6-1133P-201ENST00000410963 100 ntBASIC0.08□□□□□ -2.4
MRE11P49959 SNORD60.1-201ENST00000362451 73 ntBASIC0.07□□□□□ -2.4
MRE11P49959 SNORD114-28-201ENST00000363610 72 ntBASIC0.07□□□□□ -2.4
MRE11P49959 Y_RNA.413-201ENST00000384007 102 ntBASIC0.07□□□□□ -2.4
MRE11P49959 Y_RNA.754-201ENST00000476024 102 ntBASIC0.07□□□□□ -2.4
MRE11P49959 MIR4290-201ENST00000583807 95 ntBASIC0.07□□□□□ -2.4
MRE11P49959 Y_RNA.790-201ENST00000614282 102 ntBASIC0.07□□□□□ -2.4
MRE11P49959 Y_RNA.782-201ENST00000614695 102 ntBASIC0.07□□□□□ -2.4
MRE11P49959 MIR655-201ENST00000362159 97 ntBASIC0.06□□□□□ -2.4
MRE11P49959 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
MRE11P49959 RNU6-940P-201ENST00000363433 104 ntBASIC0.05□□□□□ -2.4
MRE11P49959 Y_RNA.282-201ENST00000364793 102 ntBASIC0.05□□□□□ -2.4
MRE11P49959 SNORA41B-201ENST00000384785 128 ntBASIC0.05□□□□□ -2.4
MRE11P49959 AC096531.1-201ENST00000419107 107 ntBASIC0.05□□□□□ -2.4
MRE11P49959 RNU6-122P-201ENST00000516818 107 ntBASIC0.05□□□□□ -2.4
MRE11P49959 MIR527-201ENST00000385244 85 ntBASIC0.04□□□□□ -2.4
MRE11P49959 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
MRE11P49959 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.03□□□□□ -2.4
MRE11P49959 SNORA62.4-201ENST00000365504 151 ntBASIC0.01□□□□□ -2.41
MRE11P49959 Y_RNA.468-201ENST00000384298 102 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms