Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 RNU6-44P-201ENST00000384045 107 ntBASIC-0.71□□□□□ -2.52
CTCFP49711 SNORD83B-201ENST00000386745 93 ntBASIC-0.71□□□□□ -2.52
CTCFP49711 SNORA26.4-201ENST00000391188 123 ntBASIC-0.71□□□□□ -2.52
CTCFP49711 SCARNA17-201ENST00000516183 144 ntBASIC-0.71□□□□□ -2.52
CTCFP49711 MIR548AG1-201ENST00000579932 66 ntBASIC-0.71□□□□□ -2.52
CTCFP49711 RNU6-924P-201ENST00000362926 108 ntBASIC-0.72□□□□□ -2.52
CTCFP49711 SNORD115-37-201ENST00000363768 82 ntBASIC-0.72□□□□□ -2.52
CTCFP49711 RNU6-681P-201ENST00000364012 104 ntBASIC-0.72□□□□□ -2.52
CTCFP49711 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.72□□□□□ -2.52
CTCFP49711 MIR29B1-201ENST00000385015 81 ntBASIC-0.72□□□□□ -2.52
CTCFP49711 RNU6-518P-201ENST00000516056 96 ntBASIC-0.72□□□□□ -2.52
CTCFP49711 SNORD115-33-201ENST00000363723 82 ntBASIC-0.73□□□□□ -2.53
CTCFP49711 SNORD115-22-201ENST00000364456 82 ntBASIC-0.73□□□□□ -2.53
CTCFP49711 RNU6-402P-201ENST00000410678 103 ntBASIC-0.73□□□□□ -2.53
CTCFP49711 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.73□□□□□ -2.53
CTCFP49711 AL021921.1-201ENST00000442774 93 ntBASIC-0.73□□□□□ -2.53
CTCFP49711 SNORD63.1-201ENST00000516178 80 ntBASIC-0.73□□□□□ -2.53
CTCFP49711 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.73□□□□□ -2.53
CTCFP49711 AC140658.3-201ENST00000567603 271 ntBASIC-0.73□□□□□ -2.53
CTCFP49711 uc_338.19-201ENST00000616808 99 ntBASIC-0.73□□□□□ -2.53
CTCFP49711 U2.7-201ENST00000619197 100 ntBASIC-0.73□□□□□ -2.53
CTCFP49711 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.74□□□□□ -2.53
CTCFP49711 RNU6-246P-201ENST00000384702 107 ntBASIC-0.74□□□□□ -2.53
CTCFP49711 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.74□□□□□ -2.53
CTCFP49711 AC093729.1-201ENST00000513074 128 ntBASIC-0.74□□□□□ -2.53
CTCFP49711 RNU6-557P-201ENST00000516842 110 ntBASIC-0.74□□□□□ -2.53
CTCFP49711 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.74□□□□□ -2.53
CTCFP49711 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.75□□□□□ -2.53
CTCFP49711 RNU6-267P-201ENST00000516714 103 ntBASIC-0.75□□□□□ -2.53
CTCFP49711 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.76□□□□□ -2.53
CTCFP49711 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.76□□□□□ -2.53
CTCFP49711 AC074348.1-201ENST00000426503 132 ntBASIC-0.76□□□□□ -2.53
CTCFP49711 RNU6-330P-201ENST00000363015 107 ntBASIC-0.77□□□□□ -2.53
CTCFP49711 RNU6-478P-201ENST00000363904 110 ntBASIC-0.77□□□□□ -2.53
CTCFP49711 RNU6-645P-201ENST00000364649 106 ntBASIC-0.77□□□□□ -2.53
CTCFP49711 RNU6-807P-201ENST00000516805 107 ntBASIC-0.77□□□□□ -2.53
CTCFP49711 snoU83B.1-201ENST00000517136 88 ntBASIC-0.77□□□□□ -2.53
CTCFP49711 MIR6818-201ENST00000621576 65 ntBASIC-0.77□□□□□ -2.53
CTCFP49711 RNU6-675P-201ENST00000384236 104 ntBASIC-0.78□□□□□ -2.53
CTCFP49711 RNU7-134P-201ENST00000458997 64 ntBASIC-0.78□□□□□ -2.53
CTCFP49711 RNU6-732P-201ENST00000516033 103 ntBASIC-0.78□□□□□ -2.53
CTCFP49711 RNU7-174P-201ENST00000516248 59 ntBASIC-0.78□□□□□ -2.53
CTCFP49711 RNU6-303P-201ENST00000517091 106 ntBASIC-0.78□□□□□ -2.53
CTCFP49711 MIR548BB-201ENST00000626714 66 ntBASIC-0.78□□□□□ -2.53
CTCFP49711 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.79□□□□□ -2.54
CTCFP49711 RNA5SP26-201ENST00000362406 119 ntBASIC-0.79□□□□□ -2.54
CTCFP49711 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.79□□□□□ -2.54
CTCFP49711 SNORD19-201ENST00000391191 68 ntBASIC-0.79□□□□□ -2.54
CTCFP49711 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.79□□□□□ -2.54
CTCFP49711 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.79□□□□□ -2.54
CTCFP49711 AP002795.1-201ENST00000534879 84 ntBASIC-0.79□□□□□ -2.54
CTCFP49711 U7.5-201ENST00000517224 61 ntBASIC-0.8□□□□□ -2.54
CTCFP49711 RNU6-686P-201ENST00000364839 107 ntBASIC-0.81□□□□□ -2.54
CTCFP49711 AL353691.2-201ENST00000443795 59 ntBASIC-0.81□□□□□ -2.54
CTCFP49711 RNU6-168P-201ENST00000516189 101 ntBASIC-0.81□□□□□ -2.54
CTCFP49711 MIR4306-201ENST00000583390 91 ntBASIC-0.81□□□□□ -2.54
CTCFP49711 MIR3675-201ENST00000583661 73 ntBASIC-0.81□□□□□ -2.54
CTCFP49711 MIR4324-201ENST00000584846 72 ntBASIC-0.81□□□□□ -2.54
CTCFP49711 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.82□□□□□ -2.54
CTCFP49711 SNORA8.1-201ENST00000384250 140 ntBASIC-0.82□□□□□ -2.54
CTCFP49711 RNU6-844P-201ENST00000517175 102 ntBASIC-0.82□□□□□ -2.54
CTCFP49711 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.82□□□□□ -2.54
CTCFP49711 MIR4441-201ENST00000582623 100 ntBASIC-0.82□□□□□ -2.54
CTCFP49711 RNU6-604P-201ENST00000390917 100 ntBASIC-0.83□□□□□ -2.54
CTCFP49711 RNU6-587P-201ENST00000391282 106 ntBASIC-0.83□□□□□ -2.54
CTCFP49711 RNU6-982P-201ENST00000516216 102 ntBASIC-0.83□□□□□ -2.54
CTCFP49711 AC006160.2-201ENST00000637708 154 ntBASIC-0.83□□□□□ -2.54
CTCFP49711 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.84□□□□□ -2.54
CTCFP49711 RNA5SP89-201ENST00000410300 108 ntBASIC-0.84□□□□□ -2.54
CTCFP49711 RNU7-88P-201ENST00000458752 63 ntBASIC-0.84□□□□□ -2.54
CTCFP49711 U4.4-201ENST00000620626 117 ntBASIC-0.84□□□□□ -2.54
CTCFP49711 RNY4P27-201ENST00000363341 96 ntBASIC-0.85□□□□□ -2.55
CTCFP49711 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.85□□□□□ -2.55
CTCFP49711 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.85□□□□□ -2.55
CTCFP49711 RNU6-129P-201ENST00000391022 107 ntBASIC-0.85□□□□□ -2.55
CTCFP49711 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.85□□□□□ -2.55
CTCFP49711 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.86□□□□□ -2.55
CTCFP49711 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.86□□□□□ -2.55
CTCFP49711 RNU6-458P-201ENST00000384179 107 ntBASIC-0.86□□□□□ -2.55
CTCFP49711 RNU6-24P-201ENST00000384440 107 ntBASIC-0.86□□□□□ -2.55
CTCFP49711 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.86□□□□□ -2.55
CTCFP49711 U6.58-201ENST00000613107 107 ntBASIC-0.86□□□□□ -2.55
CTCFP49711 MIR5683-201ENST00000636514 76 ntBASIC-0.86□□□□□ -2.55
CTCFP49711 RNU6-698P-201ENST00000363523 107 ntBASIC-0.87□□□□□ -2.55
CTCFP49711 RNU6-34P-201ENST00000364874 107 ntBASIC-0.87□□□□□ -2.55
CTCFP49711 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.87□□□□□ -2.55
CTCFP49711 RNA5SP461-201ENST00000516451 104 ntBASIC-0.87□□□□□ -2.55
CTCFP49711 MIR1297-201ENST00000637311 77 ntBASIC-0.87□□□□□ -2.55
CTCFP49711 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.88□□□□□ -2.55
CTCFP49711 SNORD45.1-201ENST00000363181 77 ntBASIC-0.88□□□□□ -2.55
CTCFP49711 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.88□□□□□ -2.55
CTCFP49711 MIR507-201ENST00000385234 94 ntBASIC-0.88□□□□□ -2.55
CTCFP49711 MIR527-201ENST00000385244 85 ntBASIC-0.88□□□□□ -2.55
CTCFP49711 RNU6-696P-201ENST00000390834 107 ntBASIC-0.88□□□□□ -2.55
CTCFP49711 MIR1285-2-201ENST00000408311 88 ntBASIC-0.88□□□□□ -2.55
CTCFP49711 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.88□□□□□ -2.55
CTCFP49711 RNU6-315P-201ENST00000362666 107 ntBASIC-0.89□□□□□ -2.55
CTCFP49711 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.89□□□□□ -2.55
CTCFP49711 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.89□□□□□ -2.55
CTCFP49711 RNU6-164P-201ENST00000364604 103 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 436.4 ms