Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RNA5SP470-201ENST00000516463 106 ntBASIC0.68□□□□□ -2.3
RARAP10276 RNU6-782P-201ENST00000516852 104 ntBASIC0.68□□□□□ -2.3
RARAP10276 SCARNA11.2-201ENST00000517183 154 ntBASIC0.68□□□□□ -2.3
RARAP10276 U4.2-201ENST00000618561 85 ntBASIC0.68□□□□□ -2.3
RARAP10276 SNORD116-16-201ENST00000384533 92 ntBASIC0.67□□□□□ -2.3
RARAP10276 RNU6-141P-201ENST00000410499 105 ntBASIC0.67□□□□□ -2.3
RARAP10276 MIR5087-201ENST00000635826 76 ntBASIC0.67□□□□□ -2.3
RARAP10276 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
RARAP10276 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
RARAP10276 Y_RNA.282-201ENST00000364793 102 ntBASIC0.66□□□□□ -2.3
RARAP10276 SNORD113-4-201ENST00000364802 75 ntBASIC0.66□□□□□ -2.3
RARAP10276 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
RARAP10276 MIR106A-201ENST00000384870 81 ntBASIC0.66□□□□□ -2.3
RARAP10276 MIR527-201ENST00000385244 85 ntBASIC0.65□□□□□ -2.31
RARAP10276 MIR548AG1-201ENST00000579932 66 ntBASIC0.65□□□□□ -2.31
RARAP10276 MIR4514-201ENST00000581410 57 ntBASIC0.65□□□□□ -2.31
RARAP10276 MIRLET7D-201ENST00000362263 87 ntBASIC0.64□□□□□ -2.31
RARAP10276 RNU6-520P-201ENST00000384717 104 ntBASIC0.62□□□□□ -2.31
RARAP10276 RNU6-127P-201ENST00000390897 107 ntBASIC0.62□□□□□ -2.31
RARAP10276 AP000676.1-201ENST00000533307 52 ntBASIC0.62□□□□□ -2.31
RARAP10276 RNU6-815P-201ENST00000384080 113 ntBASIC0.61□□□□□ -2.31
RARAP10276 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.61□□□□□ -2.31
RARAP10276 MIR1207-201ENST00000408249 87 ntBASIC0.61□□□□□ -2.31
RARAP10276 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
RARAP10276 RNA5SP134-201ENST00000516492 96 ntBASIC0.6□□□□□ -2.31
RARAP10276 RNU6-231P-201ENST00000517122 103 ntBASIC0.6□□□□□ -2.31
RARAP10276 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
RARAP10276 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
RARAP10276 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.59□□□□□ -2.31
RARAP10276 SNORD115-23-201ENST00000364461 82 ntBASIC0.58□□□□□ -2.32
RARAP10276 RNU7-119P-201ENST00000459279 63 ntBASIC0.58□□□□□ -2.32
RARAP10276 AC108740.1-201ENST00000498629 225 ntBASIC0.58□□□□□ -2.32
RARAP10276 MIR7978-201ENST00000636158 59 ntBASIC0.58□□□□□ -2.32
RARAP10276 AL353803.5-201ENST00000599815 141 ntBASIC0.57□□□□□ -2.32
RARAP10276 RNU6-1312P-201ENST00000362425 108 ntBASIC0.56□□□□□ -2.32
RARAP10276 RNU6-246P-201ENST00000384702 107 ntBASIC0.56□□□□□ -2.32
RARAP10276 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.56□□□□□ -2.32
RARAP10276 RNY1P9-201ENST00000532431 109 ntBASIC0.56□□□□□ -2.32
RARAP10276 AC108676.2-201ENST00000605225 163 ntBASIC0.56□□□□□ -2.32
RARAP10276 AC069113.3-201ENST00000521019 150 ntBASIC0.55□□□□□ -2.32
RARAP10276 Y_RNA.109-201ENST00000363215 102 ntBASIC0.54□□□□□ -2.32
RARAP10276 MIR604-201ENST00000384880 94 ntBASIC0.54□□□□□ -2.32
RARAP10276 MIR643-201ENST00000385267 97 ntBASIC0.54□□□□□ -2.32
RARAP10276 Y_RNA.722-201ENST00000517279 114 ntBASIC0.54□□□□□ -2.32
RARAP10276 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.53□□□□□ -2.32
RARAP10276 MIR429-201ENST00000362106 83 ntBASIC0.53□□□□□ -2.32
RARAP10276 RNU6-458P-201ENST00000384179 107 ntBASIC0.53□□□□□ -2.32
RARAP10276 AC023932.2-201ENST00000603176 175 ntBASIC0.53□□□□□ -2.32
RARAP10276 U6.58-201ENST00000613107 107 ntBASIC0.53□□□□□ -2.32
RARAP10276 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
RARAP10276 SNORD1B-201ENST00000363091 84 ntBASIC0.52□□□□□ -2.33
RARAP10276 Y_RNA.610-201ENST00000410681 103 ntBASIC0.52□□□□□ -2.33
RARAP10276 MIR6514-201ENST00000622549 70 ntBASIC0.52□□□□□ -2.33
RARAP10276 MIR601-201ENST00000385256 79 ntBASIC0.51□□□□□ -2.33
RARAP10276 SNORD116.2-201ENST00000391251 93 ntBASIC0.51□□□□□ -2.33
RARAP10276 MIR4493-201ENST00000584016 73 ntBASIC0.51□□□□□ -2.33
RARAP10276 MIR7110-201ENST00000612638 86 ntBASIC0.51□□□□□ -2.33
RARAP10276 snoR1.1-201ENST00000628177 80 ntBASIC0.51□□□□□ -2.33
RARAP10276 RNU6-936P-201ENST00000384005 107 ntBASIC0.5□□□□□ -2.33
RARAP10276 Y_RNA.413-201ENST00000384007 102 ntBASIC0.5□□□□□ -2.33
RARAP10276 MIR548H2-201ENST00000408874 88 ntBASIC0.5□□□□□ -2.33
RARAP10276 Y_RNA.754-201ENST00000476024 102 ntBASIC0.5□□□□□ -2.33
RARAP10276 MIR4432-201ENST00000581823 84 ntBASIC0.5□□□□□ -2.33
RARAP10276 Y_RNA.790-201ENST00000614282 102 ntBASIC0.5□□□□□ -2.33
RARAP10276 Y_RNA.782-201ENST00000614695 102 ntBASIC0.5□□□□□ -2.33
RARAP10276 AC090625.1-201ENST00000357130 210 ntBASIC0.49□□□□□ -2.33
RARAP10276 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.49□□□□□ -2.33
RARAP10276 SNORD114-31-201ENST00000363219 75 ntBASIC0.48□□□□□ -2.33
RARAP10276 RNU6-1327P-201ENST00000365302 105 ntBASIC0.48□□□□□ -2.33
RARAP10276 RNU6-808P-201ENST00000391233 108 ntBASIC0.48□□□□□ -2.33
RARAP10276 SNORA40.16-201ENST00000517238 121 ntBASIC0.48□□□□□ -2.33
RARAP10276 SNORD95.1-201ENST00000364099 68 ntBASIC0.47□□□□□ -2.33
RARAP10276 Y_RNA.468-201ENST00000384298 102 ntBASIC0.47□□□□□ -2.33
RARAP10276 RNU6-1184P-201ENST00000384588 108 ntBASIC0.47□□□□□ -2.33
RARAP10276 RNU6-172P-201ENST00000411000 93 ntBASIC0.47□□□□□ -2.33
RARAP10276 RNU7-55P-201ENST00000459426 62 ntBASIC0.47□□□□□ -2.33
RARAP10276 AC104692.1-201ENST00000472406 90 ntBASIC0.47□□□□□ -2.33
RARAP10276 CR383656.4-201ENST00000546909 122 ntBASIC0.47□□□□□ -2.33
RARAP10276 AP001180.6-201ENST00000584918 159 ntBASIC0.47□□□□□ -2.33
RARAP10276 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
RARAP10276 RNA5SP163-201ENST00000410304 99 ntBASIC0.46□□□□□ -2.34
RARAP10276 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
RARAP10276 RNU6-180P-201ENST00000516697 61 ntBASIC0.46□□□□□ -2.34
RARAP10276 AL391099.1-201ENST00000624635 187 ntBASIC0.46□□□□□ -2.34
RARAP10276 uc_338.36-201ENST00000622331 158 ntBASIC0.45□□□□□ -2.34
RARAP10276 MIR148A-201ENST00000362215 68 ntBASIC0.44□□□□□ -2.34
RARAP10276 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
RARAP10276 RNU6-900P-201ENST00000384498 102 ntBASIC0.44□□□□□ -2.34
RARAP10276 Y_RNA.514-201ENST00000384528 112 ntBASIC0.44□□□□□ -2.34
RARAP10276 Y_RNA.698-201ENST00000516798 118 ntBASIC0.44□□□□□ -2.34
RARAP10276 RNU6-973P-201ENST00000364690 107 ntBASIC0.43□□□□□ -2.34
RARAP10276 RNU6-46P-201ENST00000383860 107 ntBASIC0.43□□□□□ -2.34
RARAP10276 RNU6-1133P-201ENST00000410963 100 ntBASIC0.43□□□□□ -2.34
RARAP10276 MIR4464-201ENST00000580818 92 ntBASIC0.43□□□□□ -2.34
RARAP10276 MIR4315-1-201ENST00000636800 73 ntBASIC0.43□□□□□ -2.34
RARAP10276 MIR4315-2-201ENST00000640925 73 ntBASIC0.43□□□□□ -2.34
RARAP10276 SNORA40B-201ENST00000385573 128 ntBASIC0.42□□□□□ -2.34
RARAP10276 MIR6507-201ENST00000613630 70 ntBASIC0.42□□□□□ -2.34
RARAP10276 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.41□□□□□ -2.34
RARAP10276 RNU6-810P-201ENST00000364001 107 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 228.3 ms