Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SNORD114-3-201ENST00000364969 75 ntBASIC-3.8□□□□□ -3.02
TPM1P09493 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.8□□□□□ -3.02
TPM1P09493 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.81□□□□□ -3.02
TPM1P09493 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.81□□□□□ -3.02
TPM1P09493 AC004792.1-201ENST00000614523 137 ntBASIC-3.81□□□□□ -3.02
TPM1P09493 RNA5SP405-201ENST00000363059 114 ntBASIC-3.82□□□□□ -3.02
TPM1P09493 RNY4P27-201ENST00000363341 96 ntBASIC-3.82□□□□□ -3.02
TPM1P09493 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.82□□□□□ -3.02
TPM1P09493 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.83□□□□□ -3.02
TPM1P09493 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.83□□□□□ -3.02
TPM1P09493 RNU6-194P-201ENST00000363862 105 ntBASIC-3.84□□□□□ -3.02
TPM1P09493 MIR3675-201ENST00000583661 73 ntBASIC-3.84□□□□□ -3.02
TPM1P09493 U4.4-201ENST00000620626 117 ntBASIC-3.84□□□□□ -3.02
TPM1P09493 MIR548AA1-201ENST00000384971 97 ntBASIC-3.86□□□□□ -3.03
TPM1P09493 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.86□□□□□ -3.03
TPM1P09493 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.86□□□□□ -3.03
TPM1P09493 RNU6-797P-201ENST00000363101 109 ntBASIC-3.87□□□□□ -3.03
TPM1P09493 Y_RNA.190-201ENST00000363964 101 ntBASIC-3.87□□□□□ -3.03
TPM1P09493 Y_RNA.812-201ENST00000610788 101 ntBASIC-3.87□□□□□ -3.03
TPM1P09493 Y_RNA.784-201ENST00000613803 101 ntBASIC-3.87□□□□□ -3.03
TPM1P09493 Y_RNA.787-201ENST00000616522 101 ntBASIC-3.87□□□□□ -3.03
TPM1P09493 Y_RNA.780-201ENST00000617336 101 ntBASIC-3.87□□□□□ -3.03
TPM1P09493 Y_RNA.801-201ENST00000619005 101 ntBASIC-3.87□□□□□ -3.03
TPM1P09493 RNU6-162P-201ENST00000516228 103 ntBASIC-3.88□□□□□ -3.03
TPM1P09493 MTND5P41-201ENST00000517498 206 ntBASIC-3.88□□□□□ -3.03
TPM1P09493 U7.3-201ENST00000616123 62 ntBASIC-3.88□□□□□ -3.03
TPM1P09493 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.89□□□□□ -3.03
TPM1P09493 SNORD115-37-201ENST00000363768 82 ntBASIC-3.89□□□□□ -3.03
TPM1P09493 RNU6-257P-201ENST00000410238 98 ntBASIC-3.89□□□□□ -3.03
TPM1P09493 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.89□□□□□ -3.03
TPM1P09493 RNU6-766P-201ENST00000362478 107 ntBASIC-3.9□□□□□ -3.03
TPM1P09493 RNU6-247P-201ENST00000362636 107 ntBASIC-3.9□□□□□ -3.03
TPM1P09493 RNU6-867P-201ENST00000364956 107 ntBASIC-3.9□□□□□ -3.03
TPM1P09493 MIR548V-201ENST00000584165 80 ntBASIC-3.9□□□□□ -3.03
TPM1P09493 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.91□□□□□ -3.04
TPM1P09493 RNU6-604P-201ENST00000390917 100 ntBASIC-3.91□□□□□ -3.04
TPM1P09493 RNU6-982P-201ENST00000516216 102 ntBASIC-3.91□□□□□ -3.04
TPM1P09493 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.91□□□□□ -3.04
TPM1P09493 SNORA63-201ENST00000363450 132 ntBASIC-3.92□□□□□ -3.04
TPM1P09493 MIR590-201ENST00000385008 97 ntBASIC-3.92□□□□□ -3.04
TPM1P09493 RNU6-118P-201ENST00000516552 102 ntBASIC-3.92□□□□□ -3.04
TPM1P09493 MIR4503-201ENST00000582187 83 ntBASIC-3.92□□□□□ -3.04
TPM1P09493 AC013734.1-201ENST00000619329 111 ntBASIC-3.93□□□□□ -3.04
TPM1P09493 SNORA8.1-201ENST00000384250 140 ntBASIC-3.94□□□□□ -3.04
TPM1P09493 RNU6-330P-201ENST00000363015 107 ntBASIC-3.95□□□□□ -3.04
TPM1P09493 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.95□□□□□ -3.04
TPM1P09493 RNU6-624P-201ENST00000363411 107 ntBASIC-3.95□□□□□ -3.04
TPM1P09493 MTATP8P2-201ENST00000435212 202 ntBASIC-3.95□□□□□ -3.04
TPM1P09493 RNU6-303P-201ENST00000517091 106 ntBASIC-3.95□□□□□ -3.04
TPM1P09493 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.96□□□□□ -3.04
TPM1P09493 RNU6-1247P-201ENST00000516622 98 ntBASIC-3.96□□□□□ -3.04
TPM1P09493 RNU6-971P-201ENST00000516920 106 ntBASIC-3.96□□□□□ -3.04
TPM1P09493 AL353621.2-201ENST00000605340 133 ntBASIC-3.96□□□□□ -3.04
TPM1P09493 SNORD115-31-201ENST00000365318 82 ntBASIC-3.97□□□□□ -3.04
TPM1P09493 MIR1302-5-201ENST00000408164 150 ntBASIC-3.97□□□□□ -3.04
TPM1P09493 MIR548W-201ENST00000581970 74 ntBASIC-3.97□□□□□ -3.04
TPM1P09493 SNORD116-16-201ENST00000384533 92 ntBASIC-3.98□□□□□ -3.05
TPM1P09493 SNORD45.1-201ENST00000363181 77 ntBASIC-3.99□□□□□ -3.05
TPM1P09493 SNORD116-21-201ENST00000384507 92 ntBASIC-3.99□□□□□ -3.05
TPM1P09493 snoU13.10-201ENST00000459301 103 ntBASIC-3.99□□□□□ -3.05
TPM1P09493 RNU6-182P-201ENST00000516970 105 ntBASIC-3.99□□□□□ -3.05
TPM1P09493 U6.97-201ENST00000636904 101 ntBASIC-3.99□□□□□ -3.05
TPM1P09493 RNU6-196P-201ENST00000384315 107 ntBASIC-4□□□□□ -3.05
TPM1P09493 RNU6-659P-201ENST00000516454 104 ntBASIC-4□□□□□ -3.05
TPM1P09493 MIR466-201ENST00000580653 84 ntBASIC-4□□□□□ -3.05
TPM1P09493 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-4□□□□□ -3.05
TPM1P09493 RNU6-633P-201ENST00000362612 103 ntBASIC-4.01□□□□□ -3.05
TPM1P09493 MIR630-201ENST00000384957 97 ntBASIC-4.01□□□□□ -3.05
TPM1P09493 MIR3139-201ENST00000579145 76 ntBASIC-4.01□□□□□ -3.05
TPM1P09493 AC005520.4-201ENST00000604337 90 ntBASIC-4.01□□□□□ -3.05
TPM1P09493 Y_RNA.818-201ENST00000618813 71 ntBASIC-4.01□□□□□ -3.05
TPM1P09493 SNORD113-2-201ENST00000391082 72 ntBASIC-4.02□□□□□ -3.05
TPM1P09493 MTND4LP1-201ENST00000446263 157 ntBASIC-4.02□□□□□ -3.05
TPM1P09493 RNA5SP215-201ENST00000363440 122 ntBASIC-4.03□□□□□ -3.05
TPM1P09493 RNU6-119P-201ENST00000364882 107 ntBASIC-4.03□□□□□ -3.05
TPM1P09493 RNU6-1081P-201ENST00000384537 107 ntBASIC-4.03□□□□□ -3.05
TPM1P09493 VTRNA2-1-201ENST00000602301 127 ntBASIC-4.03□□□□□ -3.05
TPM1P09493 AC093729.1-201ENST00000513074 128 ntBASIC-4.04□□□□□ -3.06
TPM1P09493 RNU6-557P-201ENST00000516842 110 ntBASIC-4.04□□□□□ -3.06
TPM1P09493 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-4.04□□□□□ -3.06
TPM1P09493 SNORA27.2-201ENST00000363365 126 ntBASIC-4.05□□□□□ -3.06
TPM1P09493 RNU6-995P-201ENST00000391244 107 ntBASIC-4.05□□□□□ -3.06
TPM1P09493 AC074348.1-201ENST00000426503 132 ntBASIC-4.05□□□□□ -3.06
TPM1P09493 MTRNR2L9-201ENST00000622562 75 ntBASIC-4.05□□□□□ -3.06
TPM1P09493 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-4.06□□□□□ -3.06
TPM1P09493 RNU6-379P-201ENST00000363813 104 ntBASIC-4.07□□□□□ -3.06
TPM1P09493 RNU6-109P-201ENST00000516364 107 ntBASIC-4.07□□□□□ -3.06
TPM1P09493 RNU6-184P-201ENST00000516514 107 ntBASIC-4.07□□□□□ -3.06
TPM1P09493 RNA5SP173-201ENST00000364857 136 ntBASIC-4.08□□□□□ -3.06
TPM1P09493 RNU6-1064P-201ENST00000410626 104 ntBASIC-4.08□□□□□ -3.06
TPM1P09493 RNU6-327P-201ENST00000516270 127 ntBASIC-4.08□□□□□ -3.06
TPM1P09493 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-4.08□□□□□ -3.06
TPM1P09493 SNORD1B-201ENST00000363091 84 ntBASIC-4.09□□□□□ -3.06
TPM1P09493 MIR4748-201ENST00000578076 82 ntBASIC-4.09□□□□□ -3.06
TPM1P09493 RNU7-200P-201ENST00000516105 62 ntBASIC-4.1□□□□□ -3.07
TPM1P09493 MIR496-201ENST00000385226 102 ntBASIC-4.11□□□□□ -3.07
TPM1P09493 SNORD63.2-201ENST00000516303 64 ntBASIC-4.11□□□□□ -3.07
TPM1P09493 MIR4668-201ENST00000582284 70 ntBASIC-4.11□□□□□ -3.07
TPM1P09493 RNU6-686P-201ENST00000364839 107 ntBASIC-4.12□□□□□ -3.07
TPM1P09493 Y_RNA.475-201ENST00000384345 101 ntBASIC-4.12□□□□□ -3.07
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms