Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNU7-197P-201ENST00000458836 62 ntBASIC-2.5□□□□□ -2.81
TNFP01375 RNU6-231P-201ENST00000517122 103 ntBASIC-2.5□□□□□ -2.81
TNFP01375 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.51□□□□□ -2.81
TNFP01375 SNORD45A-201ENST00000384512 84 ntBASIC-2.51□□□□□ -2.81
TNFP01375 RNU6-493P-201ENST00000391321 108 ntBASIC-2.51□□□□□ -2.81
TNFP01375 MTND1P19-201ENST00000511780 315 ntBASIC-2.51□□□□□ -2.81
TNFP01375 RNU6-182P-201ENST00000516970 105 ntBASIC-2.51□□□□□ -2.81
TNFP01375 MIR7110-201ENST00000612638 86 ntBASIC-2.51□□□□□ -2.81
TNFP01375 MIR664A-201ENST00000626086 82 ntBASIC-2.51□□□□□ -2.81
TNFP01375 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.52□□□□□ -2.81
TNFP01375 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.52□□□□□ -2.81
TNFP01375 AC139453.2-201ENST00000487255 133 ntBASIC-2.52□□□□□ -2.81
TNFP01375 AP001318.4-201ENST00000616637 121 ntBASIC-2.52□□□□□ -2.81
TNFP01375 MIR6844-201ENST00000637122 62 ntBASIC-2.52□□□□□ -2.81
TNFP01375 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.53□□□□□ -2.81
TNFP01375 SNORD18B-201ENST00000365659 72 ntBASIC-2.53□□□□□ -2.81
TNFP01375 RNU6-574P-201ENST00000384265 107 ntBASIC-2.53□□□□□ -2.81
TNFP01375 MIR545-201ENST00000385085 106 ntBASIC-2.53□□□□□ -2.81
TNFP01375 SNORA40B-201ENST00000385573 128 ntBASIC-2.53□□□□□ -2.81
TNFP01375 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.53□□□□□ -2.81
TNFP01375 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.53□□□□□ -2.81
TNFP01375 RNU6-876P-201ENST00000391295 104 ntBASIC-2.53□□□□□ -2.81
TNFP01375 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.53□□□□□ -2.81
TNFP01375 RNA5SP449-201ENST00000516871 130 ntBASIC-2.53□□□□□ -2.81
TNFP01375 RNU6-537P-201ENST00000517277 103 ntBASIC-2.53□□□□□ -2.81
TNFP01375 AC109635.3-201ENST00000529536 185 ntBASIC-2.53□□□□□ -2.81
TNFP01375 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.54□□□□□ -2.82
TNFP01375 SNORD60.1-201ENST00000362451 73 ntBASIC-2.54□□□□□ -2.82
TNFP01375 RNU6-1128P-201ENST00000362825 109 ntBASIC-2.54□□□□□ -2.82
TNFP01375 SNORD45C-201ENST00000383893 79 ntBASIC-2.54□□□□□ -2.82
TNFP01375 Y_RNA.553-201ENST00000384670 102 ntBASIC-2.54□□□□□ -2.82
TNFP01375 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.55□□□□□ -2.82
TNFP01375 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.55□□□□□ -2.82
TNFP01375 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.55□□□□□ -2.82
TNFP01375 RNU6-460P-201ENST00000391158 108 ntBASIC-2.55□□□□□ -2.82
TNFP01375 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.55□□□□□ -2.82
TNFP01375 RNU6-510P-201ENST00000391239 108 ntBASIC-2.55□□□□□ -2.82
TNFP01375 RNU6-584P-201ENST00000410350 95 ntBASIC-2.55□□□□□ -2.82
TNFP01375 RNU6-303P-201ENST00000517091 106 ntBASIC-2.55□□□□□ -2.82
TNFP01375 RNU6-176P-201ENST00000517196 105 ntBASIC-2.55□□□□□ -2.82
TNFP01375 AC078883.4-201ENST00000623218 367 ntBASIC-2.55□□□□□ -2.82
TNFP01375 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.56□□□□□ -2.82
TNFP01375 SNORD116-29-201ENST00000384516 83 ntBASIC-2.56□□□□□ -2.82
TNFP01375 SNORD116.2-201ENST00000391251 93 ntBASIC-2.56□□□□□ -2.82
TNFP01375 RNU6-402P-201ENST00000410678 103 ntBASIC-2.56□□□□□ -2.82
TNFP01375 MIR548AI-201ENST00000579940 88 ntBASIC-2.56□□□□□ -2.82
TNFP01375 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.56□□□□□ -2.82
TNFP01375 RNU6-887P-201ENST00000410660 100 ntBASIC-2.57□□□□□ -2.82
TNFP01375 RNY3P15-201ENST00000516297 97 ntBASIC-2.57□□□□□ -2.82
TNFP01375 SNORD116.3-201ENST00000517176 78 ntBASIC-2.57□□□□□ -2.82
TNFP01375 AC037487.3-201ENST00000606668 112 ntBASIC-2.57□□□□□ -2.82
TNFP01375 MIR8062-201ENST00000621515 85 ntBASIC-2.57□□□□□ -2.82
TNFP01375 Y_RNA.89-201ENST00000363031 102 ntBASIC-2.58□□□□□ -2.82
TNFP01375 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.58□□□□□ -2.82
TNFP01375 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.58□□□□□ -2.82
TNFP01375 MTND4LP1-201ENST00000446263 157 ntBASIC-2.58□□□□□ -2.82
TNFP01375 RNU7-121P-201ENST00000516604 62 ntBASIC-2.58□□□□□ -2.82
TNFP01375 MIR5690-201ENST00000583739 73 ntBASIC-2.58□□□□□ -2.82
TNFP01375 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.58□□□□□ -2.82
TNFP01375 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.59□□□□□ -2.82
TNFP01375 AC130289.1-201ENST00000577321 73 ntBASIC-2.59□□□□□ -2.82
TNFP01375 MIR4484-201ENST00000582855 83 ntBASIC-2.59□□□□□ -2.82
TNFP01375 U2.14-201ENST00000615943 113 ntBASIC-2.59□□□□□ -2.82
TNFP01375 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.6□□□□□ -2.83
TNFP01375 RNU6-450P-201ENST00000364654 107 ntBASIC-2.6□□□□□ -2.83
TNFP01375 RNU6-972P-201ENST00000391208 107 ntBASIC-2.6□□□□□ -2.83
TNFP01375 MIR548H4-201ENST00000408689 111 ntBASIC-2.6□□□□□ -2.83
TNFP01375 RNU6-789P-201ENST00000517105 102 ntBASIC-2.6□□□□□ -2.83
TNFP01375 AC006362.1-201ENST00000567392 174 ntBASIC-2.6□□□□□ -2.83
TNFP01375 MIR4679-2-201ENST00000578358 77 ntBASIC-2.6□□□□□ -2.83
TNFP01375 MIR5009-201ENST00000578736 100 ntBASIC-2.6□□□□□ -2.83
TNFP01375 RNA5SP173-201ENST00000364857 136 ntBASIC-2.61□□□□□ -2.83
TNFP01375 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.61□□□□□ -2.83
TNFP01375 RNU6-915P-201ENST00000364943 103 ntBASIC-2.61□□□□□ -2.83
TNFP01375 AL158147.1-201ENST00000443970 75 ntBASIC-2.61□□□□□ -2.83
TNFP01375 Y_RNA.635-201ENST00000459041 101 ntBASIC-2.61□□□□□ -2.83
TNFP01375 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.61□□□□□ -2.83
TNFP01375 RNU6-92P-201ENST00000605893 104 ntBASIC-2.61□□□□□ -2.83
TNFP01375 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.62□□□□□ -2.83
TNFP01375 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.62□□□□□ -2.83
TNFP01375 RNU6-497P-201ENST00000365316 104 ntBASIC-2.62□□□□□ -2.83
TNFP01375 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.62□□□□□ -2.83
TNFP01375 MIR1302-11-201ENST00000408051 138 ntBASIC-2.62□□□□□ -2.83
TNFP01375 MIR1302-9-201ENST00000408365 138 ntBASIC-2.62□□□□□ -2.83
TNFP01375 MIR1302-10-201ENST00000408734 138 ntBASIC-2.62□□□□□ -2.83
TNFP01375 RNU6-557P-201ENST00000516842 110 ntBASIC-2.62□□□□□ -2.83
TNFP01375 SNORA81.3-201ENST00000517283 198 ntBASIC-2.62□□□□□ -2.83
TNFP01375 AC062037.1-201ENST00000605302 128 ntBASIC-2.62□□□□□ -2.83
TNFP01375 MIR1302-2-201ENST00000607096 138 ntBASIC-2.62□□□□□ -2.83
TNFP01375 MTND4LP32-201ENST00000636111 270 ntBASIC-2.62□□□□□ -2.83
TNFP01375 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.63□□□□□ -2.83
TNFP01375 SNORD116-10-201ENST00000363791 102 ntBASIC-2.63□□□□□ -2.83
TNFP01375 MIR519C-201ENST00000385053 87 ntBASIC-2.63□□□□□ -2.83
TNFP01375 MIR1302-6-201ENST00000408466 90 ntBASIC-2.63□□□□□ -2.83
TNFP01375 RNU6-162P-201ENST00000516228 103 ntBASIC-2.63□□□□□ -2.83
TNFP01375 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.63□□□□□ -2.83
TNFP01375 MIR4801-201ENST00000582704 82 ntBASIC-2.63□□□□□ -2.83
TNFP01375 MIR3611-201ENST00000584484 83 ntBASIC-2.63□□□□□ -2.83
TNFP01375 RNY4P14-201ENST00000363656 96 ntBASIC-2.64□□□□□ -2.83
TNFP01375 SNORD58C-201ENST00000365223 64 ntBASIC-2.64□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 237.1 ms