Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SNORD115-27-201ENST00000364430 82 ntBASIC-1.84□□□□□ -2.7
MBD3O95983 SNORD115-22-201ENST00000364456 82 ntBASIC-1.84□□□□□ -2.7
MBD3O95983 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.85□□□□□ -2.71
MBD3O95983 RNU6-81P-201ENST00000365608 104 ntBASIC-1.85□□□□□ -2.71
MBD3O95983 RNU6-983P-201ENST00000516004 103 ntBASIC-1.85□□□□□ -2.71
MBD3O95983 U2.7-201ENST00000619197 100 ntBASIC-1.85□□□□□ -2.71
MBD3O95983 MIR6502-201ENST00000617296 76 ntBASIC-1.86□□□□□ -2.71
MBD3O95983 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.87□□□□□ -2.71
MBD3O95983 RNU6-209P-201ENST00000384118 107 ntBASIC-1.87□□□□□ -2.71
MBD3O95983 RNU6-589P-201ENST00000516485 107 ntBASIC-1.87□□□□□ -2.71
MBD3O95983 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.87□□□□□ -2.71
MBD3O95983 RNU2-51P-201ENST00000410708 197 ntBASIC-1.88□□□□□ -2.71
MBD3O95983 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.88□□□□□ -2.71
MBD3O95983 RNA5SP26-201ENST00000362406 119 ntBASIC-1.89□□□□□ -2.71
MBD3O95983 SNORA19-201ENST00000384737 128 ntBASIC-1.89□□□□□ -2.71
MBD3O95983 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.89□□□□□ -2.71
MBD3O95983 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.9□□□□□ -2.71
MBD3O95983 AC093729.1-201ENST00000513074 128 ntBASIC-1.9□□□□□ -2.71
MBD3O95983 AC091912.2-201ENST00000624798 167 ntBASIC-1.9□□□□□ -2.71
MBD3O95983 RNU6-557P-201ENST00000516842 110 ntBASIC-1.91□□□□□ -2.72
MBD3O95983 MIR4668-201ENST00000582284 70 ntBASIC-1.91□□□□□ -2.72
MBD3O95983 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.92□□□□□ -2.72
MBD3O95983 RNU6-164P-201ENST00000364604 103 ntBASIC-1.92□□□□□ -2.72
MBD3O95983 RNU6-645P-201ENST00000364649 106 ntBASIC-1.92□□□□□ -2.72
MBD3O95983 RNU6-246P-201ENST00000384702 107 ntBASIC-1.92□□□□□ -2.72
MBD3O95983 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.92□□□□□ -2.72
MBD3O95983 SNORD18.1-201ENST00000363807 70 ntBASIC-1.93□□□□□ -2.72
MBD3O95983 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.93□□□□□ -2.72
MBD3O95983 MIR4490-201ENST00000582647 84 ntBASIC-1.93□□□□□ -2.72
MBD3O95983 U7.5-201ENST00000517224 61 ntBASIC-1.94□□□□□ -2.72
MBD3O95983 RNU6-119P-201ENST00000364882 107 ntBASIC-1.95□□□□□ -2.72
MBD3O95983 RNA5SP86-201ENST00000390869 98 ntBASIC-1.95□□□□□ -2.72
MBD3O95983 RNU6-303P-201ENST00000517091 106 ntBASIC-1.95□□□□□ -2.72
MBD3O95983 MIR3675-201ENST00000583661 73 ntBASIC-1.95□□□□□ -2.72
MBD3O95983 AL365222.1-201ENST00000614661 98 ntBASIC-1.95□□□□□ -2.72
MBD3O95983 SNORD116-22-201ENST00000384430 92 ntBASIC-1.96□□□□□ -2.72
MBD3O95983 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.96□□□□□ -2.72
MBD3O95983 MIR6874-201ENST00000635894 71 ntBASIC-1.96□□□□□ -2.72
MBD3O95983 MIR5683-201ENST00000636514 76 ntBASIC-1.96□□□□□ -2.72
MBD3O95983 RNU6-774P-201ENST00000363238 107 ntBASIC-1.97□□□□□ -2.72
MBD3O95983 SNORD19-201ENST00000391191 68 ntBASIC-1.97□□□□□ -2.72
MBD3O95983 MIR548AG1-201ENST00000579932 66 ntBASIC-1.97□□□□□ -2.72
MBD3O95983 MIR496-201ENST00000385226 102 ntBASIC-1.98□□□□□ -2.73
MBD3O95983 MIR507-201ENST00000385234 94 ntBASIC-1.98□□□□□ -2.73
MBD3O95983 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.98□□□□□ -2.73
MBD3O95983 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.98□□□□□ -2.73
MBD3O95983 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.98□□□□□ -2.73
MBD3O95983 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.98□□□□□ -2.73
MBD3O95983 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.99□□□□□ -2.73
MBD3O95983 MIR548H1-201ENST00000408610 102 ntBASIC-1.99□□□□□ -2.73
MBD3O95983 Y_RNA.225-201ENST00000364326 97 ntBASIC-2□□□□□ -2.73
MBD3O95983 RNU6-497P-201ENST00000365316 104 ntBASIC-2□□□□□ -2.73
MBD3O95983 AL078595.1-201ENST00000404458 226 ntBASIC-2□□□□□ -2.73
MBD3O95983 AL031737.1-201ENST00000450125 223 ntBASIC-2□□□□□ -2.73
MBD3O95983 RNU7-88P-201ENST00000458752 63 ntBASIC-2□□□□□ -2.73
MBD3O95983 AC074348.1-201ENST00000426503 132 ntBASIC-2.01□□□□□ -2.73
MBD3O95983 RNU7-174P-201ENST00000516248 59 ntBASIC-2.01□□□□□ -2.73
MBD3O95983 RNU6-686P-201ENST00000364839 107 ntBASIC-2.02□□□□□ -2.73
MBD3O95983 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.02□□□□□ -2.73
MBD3O95983 MIR429-201ENST00000362106 83 ntBASIC-2.03□□□□□ -2.73
MBD3O95983 AP002795.1-201ENST00000534879 84 ntBASIC-2.03□□□□□ -2.73
MBD3O95983 RNU6-219P-201ENST00000364728 107 ntBASIC-2.04□□□□□ -2.74
MBD3O95983 RNU6-22P-201ENST00000384355 107 ntBASIC-2.04□□□□□ -2.74
MBD3O95983 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.04□□□□□ -2.74
MBD3O95983 MIR3671-201ENST00000580455 88 ntBASIC-2.04□□□□□ -2.74
MBD3O95983 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.05□□□□□ -2.74
MBD3O95983 MIR548C-201ENST00000384815 97 ntBASIC-2.05□□□□□ -2.74
MBD3O95983 SNORA40.13-201ENST00000516379 120 ntBASIC-2.05□□□□□ -2.74
MBD3O95983 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.05□□□□□ -2.74
MBD3O95983 MIR3668-201ENST00000582138 75 ntBASIC-2.05□□□□□ -2.74
MBD3O95983 AP001318.4-201ENST00000616637 121 ntBASIC-2.05□□□□□ -2.74
MBD3O95983 RNU6-228P-201ENST00000362700 106 ntBASIC-2.06□□□□□ -2.74
MBD3O95983 RNU6-478P-201ENST00000363904 110 ntBASIC-2.06□□□□□ -2.74
MBD3O95983 RNU6-458P-201ENST00000384179 107 ntBASIC-2.06□□□□□ -2.74
MBD3O95983 RNU6-696P-201ENST00000390834 107 ntBASIC-2.06□□□□□ -2.74
MBD3O95983 U6.58-201ENST00000613107 107 ntBASIC-2.06□□□□□ -2.74
MBD3O95983 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.07□□□□□ -2.74
MBD3O95983 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.07□□□□□ -2.74
MBD3O95983 MALAT1.1-201ENST00000618249 95 ntBASIC-2.07□□□□□ -2.74
MBD3O95983 MIR1297-201ENST00000637311 77 ntBASIC-2.07□□□□□ -2.74
MBD3O95983 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.08□□□□□ -2.74
MBD3O95983 SNORA8.1-201ENST00000384250 140 ntBASIC-2.08□□□□□ -2.74
MBD3O95983 RNU6-587P-201ENST00000391282 106 ntBASIC-2.08□□□□□ -2.74
MBD3O95983 MIR548BB-201ENST00000626714 66 ntBASIC-2.08□□□□□ -2.74
MBD3O95983 RNU6-330P-201ENST00000363015 107 ntBASIC-2.09□□□□□ -2.74
MBD3O95983 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.09□□□□□ -2.74
MBD3O95983 RNU6-168P-201ENST00000516189 101 ntBASIC-2.09□□□□□ -2.74
MBD3O95983 RNU6-698P-201ENST00000363523 107 ntBASIC-2.1□□□□□ -2.75
MBD3O95983 RNU6-34P-201ENST00000364874 107 ntBASIC-2.1□□□□□ -2.75
MBD3O95983 AC090616.4-201ENST00000448026 115 ntBASIC-2.1□□□□□ -2.75
MBD3O95983 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.11□□□□□ -2.75
MBD3O95983 RNU6-129P-201ENST00000391022 107 ntBASIC-2.11□□□□□ -2.75
MBD3O95983 SNORD45.1-201ENST00000363181 77 ntBASIC-2.12□□□□□ -2.75
MBD3O95983 RNY4P7-201ENST00000364600 96 ntBASIC-2.12□□□□□ -2.75
MBD3O95983 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.12□□□□□ -2.75
MBD3O95983 MIR487B-201ENST00000385021 84 ntBASIC-2.12□□□□□ -2.75
MBD3O95983 RNU6-400P-201ENST00000391173 106 ntBASIC-2.12□□□□□ -2.75
MBD3O95983 MIR548Q-201ENST00000408404 100 ntBASIC-2.12□□□□□ -2.75
MBD3O95983 RNU6-402P-201ENST00000410678 103 ntBASIC-2.12□□□□□ -2.75
MBD3O95983 RNU6-604P-201ENST00000390917 100 ntBASIC-2.13□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms