Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU6-807P-201ENST00000516805 107 ntBASIC-0.93□□□□□ -2.56
CTDNEP1O95476 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.93□□□□□ -2.56
CTDNEP1O95476 MIR4499-201ENST00000584834 69 ntBASIC-0.93□□□□□ -2.56
CTDNEP1O95476 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.94□□□□□ -2.56
CTDNEP1O95476 SNORD115-33-201ENST00000363723 82 ntBASIC-0.94□□□□□ -2.56
CTDNEP1O95476 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.94□□□□□ -2.56
CTDNEP1O95476 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.94□□□□□ -2.56
CTDNEP1O95476 MIR4484-201ENST00000582855 83 ntBASIC-0.94□□□□□ -2.56
CTDNEP1O95476 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.95□□□□□ -2.56
CTDNEP1O95476 RNA5SP89-201ENST00000410300 108 ntBASIC-0.95□□□□□ -2.56
CTDNEP1O95476 RNU6-168P-201ENST00000516189 101 ntBASIC-0.95□□□□□ -2.56
CTDNEP1O95476 uc_338.19-201ENST00000616808 99 ntBASIC-0.95□□□□□ -2.56
CTDNEP1O95476 SNORD45.1-201ENST00000363181 77 ntBASIC-0.96□□□□□ -2.56
CTDNEP1O95476 SNORD114-15-201ENST00000364687 72 ntBASIC-0.96□□□□□ -2.56
CTDNEP1O95476 MIR548C-201ENST00000384815 97 ntBASIC-0.96□□□□□ -2.56
CTDNEP1O95476 RNU4-61P-201ENST00000411243 107 ntBASIC-0.96□□□□□ -2.56
CTDNEP1O95476 RNU7-88P-201ENST00000458752 63 ntBASIC-0.96□□□□□ -2.56
CTDNEP1O95476 RNU7-174P-201ENST00000516248 59 ntBASIC-0.96□□□□□ -2.56
CTDNEP1O95476 U7.5-201ENST00000517224 61 ntBASIC-0.96□□□□□ -2.56
CTDNEP1O95476 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.97□□□□□ -2.56
CTDNEP1O95476 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.97□□□□□ -2.56
CTDNEP1O95476 RNU6-732P-201ENST00000516033 103 ntBASIC-0.97□□□□□ -2.56
CTDNEP1O95476 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.97□□□□□ -2.56
CTDNEP1O95476 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.97□□□□□ -2.56
CTDNEP1O95476 MIR3681-201ENST00000580089 72 ntBASIC-0.97□□□□□ -2.56
CTDNEP1O95476 snoU83B.1-201ENST00000517136 88 ntBASIC-0.98□□□□□ -2.57
CTDNEP1O95476 AP002795.1-201ENST00000534879 84 ntBASIC-0.98□□□□□ -2.57
CTDNEP1O95476 SNORD19-201ENST00000391191 68 ntBASIC-0.99□□□□□ -2.57
CTDNEP1O95476 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.99□□□□□ -2.57
CTDNEP1O95476 MIR5588-201ENST00000581890 63 ntBASIC-0.99□□□□□ -2.57
CTDNEP1O95476 Y_RNA.291-201ENST00000364886 113 ntBASIC-1□□□□□ -2.57
CTDNEP1O95476 Y_RNA.325-201ENST00000365171 122 ntBASIC-1□□□□□ -2.57
CTDNEP1O95476 RNU6-979P-201ENST00000383896 107 ntBASIC-1□□□□□ -2.57
CTDNEP1O95476 HAR1A.1-201ENST00000459583 118 ntBASIC-1□□□□□ -2.57
CTDNEP1O95476 MIR664A-201ENST00000626086 82 ntBASIC-1□□□□□ -2.57
CTDNEP1O95476 U2.22-201ENST00000636441 106 ntBASIC-1□□□□□ -2.57
CTDNEP1O95476 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.01□□□□□ -2.57
CTDNEP1O95476 RNU6-587P-201ENST00000391282 106 ntBASIC-1.01□□□□□ -2.57
CTDNEP1O95476 snoU13.19-201ENST00000459148 104 ntBASIC-1.01□□□□□ -2.57
CTDNEP1O95476 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.01□□□□□ -2.57
CTDNEP1O95476 MIR1297-201ENST00000637311 77 ntBASIC-1.01□□□□□ -2.57
CTDNEP1O95476 RNY1P1-201ENST00000364372 112 ntBASIC-1.02□□□□□ -2.57
CTDNEP1O95476 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.02□□□□□ -2.57
CTDNEP1O95476 AL353691.2-201ENST00000443795 59 ntBASIC-1.02□□□□□ -2.57
CTDNEP1O95476 RNU7-134P-201ENST00000458997 64 ntBASIC-1.02□□□□□ -2.57
CTDNEP1O95476 IGLL4P-201ENST00000614590 133 ntBASIC-1.02□□□□□ -2.57
CTDNEP1O95476 U4.4-201ENST00000620626 117 ntBASIC-1.02□□□□□ -2.57
CTDNEP1O95476 RNU6-315P-201ENST00000362666 107 ntBASIC-1.03□□□□□ -2.57
CTDNEP1O95476 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.03□□□□□ -2.57
CTDNEP1O95476 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.03□□□□□ -2.57
CTDNEP1O95476 RNU6-458P-201ENST00000384179 107 ntBASIC-1.03□□□□□ -2.57
CTDNEP1O95476 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
CTDNEP1O95476 RNY1P9-201ENST00000532431 109 ntBASIC-1.03□□□□□ -2.57
CTDNEP1O95476 MIR548AI-201ENST00000579940 88 ntBASIC-1.03□□□□□ -2.57
CTDNEP1O95476 U6.58-201ENST00000613107 107 ntBASIC-1.03□□□□□ -2.57
CTDNEP1O95476 RNA5SP26-201ENST00000362406 119 ntBASIC-1.04□□□□□ -2.58
CTDNEP1O95476 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.04□□□□□ -2.58
CTDNEP1O95476 MIR29B1-201ENST00000385015 81 ntBASIC-1.04□□□□□ -2.58
CTDNEP1O95476 MIR548AX-201ENST00000580117 73 ntBASIC-1.04□□□□□ -2.58
CTDNEP1O95476 MIR6818-201ENST00000621576 65 ntBASIC-1.04□□□□□ -2.58
CTDNEP1O95476 RNU6-698P-201ENST00000363523 107 ntBASIC-1.05□□□□□ -2.58
CTDNEP1O95476 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.05□□□□□ -2.58
CTDNEP1O95476 RNU6-34P-201ENST00000364874 107 ntBASIC-1.05□□□□□ -2.58
CTDNEP1O95476 SCARNA17-201ENST00000516183 144 ntBASIC-1.05□□□□□ -2.58
CTDNEP1O95476 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.06□□□□□ -2.58
CTDNEP1O95476 SNORD113.1-201ENST00000363280 73 ntBASIC-1.06□□□□□ -2.58
CTDNEP1O95476 RNU6-153P-201ENST00000364422 104 ntBASIC-1.06□□□□□ -2.58
CTDNEP1O95476 SNORD45A-201ENST00000384512 84 ntBASIC-1.06□□□□□ -2.58
CTDNEP1O95476 RNU6-30P-201ENST00000384561 107 ntBASIC-1.06□□□□□ -2.58
CTDNEP1O95476 RNY4P30-201ENST00000410216 95 ntBASIC-1.06□□□□□ -2.58
CTDNEP1O95476 RNU7-171P-201ENST00000459581 62 ntBASIC-1.06□□□□□ -2.58
CTDNEP1O95476 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.06□□□□□ -2.58
CTDNEP1O95476 MIR507-201ENST00000385234 94 ntBASIC-1.07□□□□□ -2.58
CTDNEP1O95476 MIR548V-201ENST00000584165 80 ntBASIC-1.07□□□□□ -2.58
CTDNEP1O95476 MIR5683-201ENST00000636514 76 ntBASIC-1.07□□□□□ -2.58
CTDNEP1O95476 MIR527-201ENST00000385244 85 ntBASIC-1.08□□□□□ -2.58
CTDNEP1O95476 MIR4712-201ENST00000583750 82 ntBASIC-1.08□□□□□ -2.58
CTDNEP1O95476 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.08□□□□□ -2.58
CTDNEP1O95476 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.09□□□□□ -2.58
CTDNEP1O95476 MIR630-201ENST00000384957 97 ntBASIC-1.09□□□□□ -2.58
CTDNEP1O95476 RNU6-380P-201ENST00000410207 107 ntBASIC-1.09□□□□□ -2.58
CTDNEP1O95476 MTND4LP1-201ENST00000446263 157 ntBASIC-1.09□□□□□ -2.58
CTDNEP1O95476 MIR378F-201ENST00000578143 78 ntBASIC-1.09□□□□□ -2.58
CTDNEP1O95476 MIR8053-201ENST00000613344 75 ntBASIC-1.09□□□□□ -2.58
CTDNEP1O95476 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.1□□□□□ -2.59
CTDNEP1O95476 RNU6-598P-201ENST00000364017 105 ntBASIC-1.1□□□□□ -2.59
CTDNEP1O95476 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.1□□□□□ -2.59
CTDNEP1O95476 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.1□□□□□ -2.59
CTDNEP1O95476 MIR494-201ENST00000349529 81 ntBASIC-1.11□□□□□ -2.59
CTDNEP1O95476 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.11□□□□□ -2.59
CTDNEP1O95476 RNU6-668P-201ENST00000364180 107 ntBASIC-1.11□□□□□ -2.59
CTDNEP1O95476 RNU6-696P-201ENST00000390834 107 ntBASIC-1.11□□□□□ -2.59
CTDNEP1O95476 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.11□□□□□ -2.59
CTDNEP1O95476 MIR1245B-201ENST00000636115 69 ntBASIC-1.11□□□□□ -2.59
CTDNEP1O95476 RNA5SP215-201ENST00000363440 122 ntBASIC-1.12□□□□□ -2.59
CTDNEP1O95476 SNORD113-2-201ENST00000391082 72 ntBASIC-1.12□□□□□ -2.59
CTDNEP1O95476 RPL35AP4-201ENST00000412007 102 ntBASIC-1.12□□□□□ -2.59
CTDNEP1O95476 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.13□□□□□ -2.59
CTDNEP1O95476 MIR548Q-201ENST00000408404 100 ntBASIC-1.13□□□□□ -2.59
CTDNEP1O95476 SNORD57-201ENST00000448188 72 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 265.8 ms